RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 PIP4K2BP78356 416 aa8.15□□□□□ -1.1
CCDC58P3-201ENST00000590792 ALG1LQ6GMV1 187 aa8.15□□□□□ -1.1
CCDC58P3-201ENST00000590792 FBF1Q8TES7 1133 aa8.15□□□□□ -1.1
CCDC58P3-201ENST00000590792 BCO2Q9BYV7 579 aa8.15□□□□□ -1.1
CCDC58P3-201ENST00000590792 SEC31BQ9NQW1 1179 aa8.15□□□□□ -1.1
CCDC58P3-201ENST00000590792 DDX3YO15523 660 aaKnown RBP8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 FOXD4L6Q3SYB3 417 aaPredicted RBP8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 NXPE4Q6UWF7 544 aa8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 FOXD4L3Q6VB84 417 aaPredicted RBP8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 KLHDC7BQ96G42 594 aa8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 KCNK4Q9NYG8 393 aa8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 TRAK1Q9UPV9 953 aa8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 LTBP4Q8N2S1 1624 aa8.14□□□□□ -1.11
CCDC58P3-201ENST00000590792 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 C9orf172C9J069 976 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 SOX1O00570 391 aaPredicted RBP8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 TM4SF5O14894 197 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 ADAM11O75078 769 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 ESRRAP11474 423 aaPredicted RBP8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 CD68P34810 354 aaPredicted RBP8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 FCGRTP55899 365 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 NLRP12P59046 1061 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 PCDH1Q08174 1060 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 MBTPS1Q14703 1052 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 KLHL23Q8NBE8 558 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 LENG1Q96BZ8 264 aaPredicted RBP8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 CLEC4MQ9H2X3 399 aaPredicted RBP8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 ZNF576Q9H609 170 aa8.13□□□□□ -1.11
CCDC58P3-201ENST00000590792 WISP1O95388 367 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 ITPKAP23677 461 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 C19orf57Q0VDD7 668 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 DCAF11Q8TEB1 546 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 FOXD4L4Q8WXT5 416 aaPredicted RBP8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 WNT8BQ93098 351 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 SPOCK3Q9BQ16 436 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 RAD54L2Q9Y4B4 1467 aa8.12□□□□□ -1.11
CCDC58P3-201ENST00000590792 MSTNO14793 375 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 PRPF40AO75400 957 aaKnown RBP8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 PROCP04070 461 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 ARL4DP49703 201 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 NRG1Q02297 640 aaPredicted RBP8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 ADGRE1Q14246 886 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 ZNF423Q2M1K9 1284 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 UBASH3BQ8TF42 649 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 OSGEPQ9NPF4 335 aa8.11□□□□□ -1.11
CCDC58P3-201ENST00000590792 ALX3O95076 343 aa8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 GSTM4Q03013 218 aa8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 AGGF1Q8N302 714 aaeCLIP8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 DUSP9Q99956 384 aaKnown RBP8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 OSBPL7Q9BZF2 842 aa8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 SPG7Q9UQ90 795 aa8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 PTPRTO14522 1441 aa8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 NUP160Q12769 1436 aa8.1□□□□□ -1.11
CCDC58P3-201ENST00000590792 GATA4P43694 442 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 MFAP1P55081 439 aaKnown RBP8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 TAGLNQ01995 201 aaKnown RBP8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 ACAD11Q709F0 780 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 USP26Q9BXU7 913 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 PPP4R2Q9NY27 417 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 MADDQ8WXG6 1647 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 SOGA1O94964 1423 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 YEATS2Q9ULM3 1422 aa8.09□□□□□ -1.11
CCDC58P3-201ENST00000590792 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 B3GALT4O96024 378 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 ERCC3P19447 782 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 NOS3P29474 1203 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 PTPN12Q05209 780 aaKnown RBP8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 FAAP100Q0VG06 881 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 DUOXA2Q1HG44 320 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 TXNRD3Q86VQ6 643 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 SOX17Q9H6I2 414 aaPredicted RBP8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 AKTIPQ9H8T0 292 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 AKAP2Q9Y2D5 859 aa8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 PRG4Q92954 1404 aaPredicted RBP8.08□□□□□ -1.12
CCDC58P3-201ENST00000590792 GRIN2AQ12879 1464 aa8.07□□□□□ -1.12
CCDC58P3-201ENST00000590792 GNA15P30679 374 aa8.07□□□□□ -1.12
CCDC58P3-201ENST00000590792 C3orf58Q8NDZ4 430 aa8.07□□□□□ -1.12
CCDC58P3-201ENST00000590792 C12orf49Q9H741 205 aa8.07□□□□□ -1.12
CCDC58P3-201ENST00000590792 KIAA0586Q9BVV6 1533 aa8.07□□□□□ -1.12
CCDC58P3-201ENST00000590792 MAP3K4Q9Y6R4 1608 aa8.07□□□□□ -1.12
CCDC58P3-201ENST00000590792 PBRM1Q86U86 1689 aa8.06□□□□□ -1.12
CCDC58P3-201ENST00000590792 GSTT1P30711 240 aa8.06□□□□□ -1.12
CCDC58P3-201ENST00000590792 KIAA1211Q6ZU35 1233 aa8.06□□□□□ -1.12
CCDC58P3-201ENST00000590792 FAM161BQ96MY7 647 aa8.06□□□□□ -1.12
CCDC58P3-201ENST00000590792 PARP2Q9UGN5 583 aa8.06□□□□□ -1.12
CCDC58P3-201ENST00000590792 GPN3Q9UHW5 284 aaPredicted RBP8.06□□□□□ -1.12
CCDC58P3-201ENST00000590792 BCORL1Q5H9F3 1711 aa8.06□□□□□ -1.12
CCDC58P3-201ENST00000590792 FBXO24O75426 580 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms