RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 MYH16Q9H6N6 1097 aa18.65■□□□□ 0.58
ERCC1-211ENST00000590701 SZT2Q5T011 3432 aa18.64■□□□□ 0.57
ERCC1-211ENST00000590701 FKBP5Q13451 457 aaPredicted RBP18.64■□□□□ 0.57
ERCC1-211ENST00000590701 GRIK5Q16478 980 aa18.64■□□□□ 0.57
ERCC1-211ENST00000590701 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
ERCC1-211ENST00000590701 MFSD14BQ5SR56 506 aa18.64■□□□□ 0.57
ERCC1-211ENST00000590701 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
ERCC1-211ENST00000590701 LINS1Q8NG48 757 aa18.64■□□□□ 0.57
ERCC1-211ENST00000590701 FAM205AQ6ZU69 1335 aa18.64■□□□□ 0.57
ERCC1-211ENST00000590701 GYG1P46976 350 aa18.63■□□□□ 0.57
ERCC1-211ENST00000590701 TNFAIP1Q13829 316 aa18.63■□□□□ 0.57
ERCC1-211ENST00000590701 MTFR1Q15390 333 aa18.63■□□□□ 0.57
ERCC1-211ENST00000590701 LMBR1LQ6UX01 489 aa18.63■□□□□ 0.57
ERCC1-211ENST00000590701 CHRDL2Q6WN34 429 aa18.63■□□□□ 0.57
ERCC1-211ENST00000590701 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.63■□□□□ 0.57
ERCC1-211ENST00000590701 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
ERCC1-211ENST00000590701 LDHAL6AQ6ZMR3 332 aa18.62■□□□□ 0.57
ERCC1-211ENST00000590701 SERPINA10Q9UK55 444 aa18.62■□□□□ 0.57
ERCC1-211ENST00000590701 CSADQ9Y600 493 aa18.62■□□□□ 0.57
ERCC1-211ENST00000590701 BTBD19C9JJ37 291 aa18.61■□□□□ 0.57
ERCC1-211ENST00000590701 F6X3S4 739 aa18.61■□□□□ 0.57
ERCC1-211ENST00000590701 TLR2O60603 784 aa18.61■□□□□ 0.57
ERCC1-211ENST00000590701 CRKP46108 304 aa18.61■□□□□ 0.57
ERCC1-211ENST00000590701 CACNB3P54284 484 aa18.61■□□□□ 0.57
ERCC1-211ENST00000590701 LACTBP83111 547 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-211ENST00000590701 DPF3Q92784 378 aa18.61■□□□□ 0.57
ERCC1-211ENST00000590701 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-211ENST00000590701 FAM84BQ96KN1 310 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-211ENST00000590701 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-211ENST00000590701 CNNM1Q9NRU3 951 aa18.61■□□□□ 0.57
ERCC1-211ENST00000590701 RBM27Q9P2N5 1060 aaKnown RBP18.61■□□□□ 0.57
ERCC1-211ENST00000590701 CTGFP29279 349 aa18.6■□□□□ 0.57
ERCC1-211ENST00000590701 HIBADHP31937 336 aaKnown RBP18.59■□□□□ 0.57
ERCC1-211ENST00000590701 KIF22Q14807 665 aa18.59■□□□□ 0.57
ERCC1-211ENST00000590701 CCDC57Q2TAC2 916 aa18.59■□□□□ 0.57
ERCC1-211ENST00000590701 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
ERCC1-211ENST00000590701 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
ERCC1-211ENST00000590701 PUS3Q9BZE2 481 aaKnown RBP18.59■□□□□ 0.57
ERCC1-211ENST00000590701 IQSEC3Q9UPP2 1182 aaPredicted RBP18.59■□□□□ 0.57
ERCC1-211ENST00000590701 SNCAIPQ9Y6H5 919 aa18.59■□□□□ 0.57
ERCC1-211ENST00000590701 SPDYE5A6NIY4 337 aa18.58■□□□□ 0.56
ERCC1-211ENST00000590701 IRF6O14896 467 aa18.58■□□□□ 0.56
ERCC1-211ENST00000590701 CETPP11597 493 aa18.58■□□□□ 0.56
ERCC1-211ENST00000590701 TNNI2P48788 182 aa18.58■□□□□ 0.56
ERCC1-211ENST00000590701 BEND3Q5T5X7 828 aa18.58■□□□□ 0.56
ERCC1-211ENST00000590701 WWC1Q8IX03 1113 aa18.58■□□□□ 0.56
ERCC1-211ENST00000590701 CPA4Q9UI42 421 aa18.58■□□□□ 0.56
ERCC1-211ENST00000590701 ARAP2Q8WZ64 1704 aa18.57■□□□□ 0.56
ERCC1-211ENST00000590701 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
ERCC1-211ENST00000590701 CACNA1FO60840 1977 aa18.56■□□□□ 0.56
ERCC1-211ENST00000590701 VAMP4O75379 141 aa18.56■□□□□ 0.56
ERCC1-211ENST00000590701 WDHD1O75717 1129 aaPredicted RBP18.56■□□□□ 0.56
ERCC1-211ENST00000590701 CHAF1AQ13111 956 aaPredicted RBP18.56■□□□□ 0.56
ERCC1-211ENST00000590701 UBE4AQ14139 1066 aa18.56■□□□□ 0.56
ERCC1-211ENST00000590701 C17orf99Q6UX52 265 aa18.56■□□□□ 0.56
ERCC1-211ENST00000590701 WRNIP1Q96S55 665 aa18.56■□□□□ 0.56
ERCC1-211ENST00000590701 PSMC4P43686 418 aa18.55■□□□□ 0.56
ERCC1-211ENST00000590701 SNAPC2Q13487 334 aa18.55■□□□□ 0.56
ERCC1-211ENST00000590701 MIGA2Q7L4E1 593 aa18.55■□□□□ 0.56
ERCC1-211ENST00000590701 TRIM47Q96LD4 638 aa18.55■□□□□ 0.56
ERCC1-211ENST00000590701 CCDC184Q52MB2 194 aa18.54■□□□□ 0.56
ERCC1-211ENST00000590701 SRRDQ9UH36 339 aa18.54■□□□□ 0.56
ERCC1-211ENST00000590701 GNRH1P01148 92 aa18.53■□□□□ 0.56
ERCC1-211ENST00000590701 OSBPP22059 807 aa18.53■□□□□ 0.56
ERCC1-211ENST00000590701 PRMT2P55345 433 aa18.53■□□□□ 0.56
ERCC1-211ENST00000590701 FBXO33Q7Z6M2 555 aa18.53■□□□□ 0.56
ERCC1-211ENST00000590701 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.53■□□□□ 0.56
ERCC1-211ENST00000590701 GRM8O00222 908 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 DLL1O00548 723 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 FMNL1O95466 1100 aaPredicted RBP18.52■□□□□ 0.56
ERCC1-211ENST00000590701 CCL5P13501 91 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 INPP5BP32019 993 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 GRK4P32298 578 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 PPIL2Q13356 520 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 CCDC27Q2M243 656 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 RAET1EQ8TD07 263 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 ZCCHC17Q9NP64 241 aaKnown RBP18.52■□□□□ 0.56
ERCC1-211ENST00000590701 RIPOR2Q9Y4F9 1068 aa18.52■□□□□ 0.56
ERCC1-211ENST00000590701 PDHXO00330 501 aa18.51■□□□□ 0.55
ERCC1-211ENST00000590701 HDLBPQ00341 1268 aaKnown RBP18.51■□□□□ 0.55
ERCC1-211ENST00000590701 EXOSC9Q06265 439 aaKnown RBP18.51■□□□□ 0.55
ERCC1-211ENST00000590701 APOBEC3HQ6NTF7 200 aaKnown RBP18.51■□□□□ 0.55
ERCC1-211ENST00000590701 SLC17A8Q8NDX2 589 aa18.51■□□□□ 0.55
ERCC1-211ENST00000590701 TEKT1Q969V4 418 aa18.51■□□□□ 0.55
ERCC1-211ENST00000590701 KAZALD1Q96I82 304 aa18.51■□□□□ 0.55
ERCC1-211ENST00000590701 RNF208Q9H0X6 261 aa18.51■□□□□ 0.55
ERCC1-211ENST00000590701 PRO3102Q9H379 93 aa18.51■□□□□ 0.55
ERCC1-211ENST00000590701 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
ERCC1-211ENST00000590701 BIN2Q9UBW5 565 aaPredicted RBP18.51■□□□□ 0.55
ERCC1-211ENST00000590701 SALL2Q9Y467 1007 aaPredicted RBP18.51■□□□□ 0.55
ERCC1-211ENST00000590701 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
ERCC1-211ENST00000590701 RANBP2P49792 3224 aaKnown RBP18.5■□□□□ 0.55
ERCC1-211ENST00000590701 GJB1P08034 283 aa18.5■□□□□ 0.55
ERCC1-211ENST00000590701 GJA8P48165 433 aa18.5■□□□□ 0.55
ERCC1-211ENST00000590701 PPATQ06203 517 aa18.5■□□□□ 0.55
ERCC1-211ENST00000590701 UBE2Q1Q7Z7E8 422 aa18.5■□□□□ 0.55
ERCC1-211ENST00000590701 VPS37DQ86XT2 251 aa18.5■□□□□ 0.55
ERCC1-211ENST00000590701 FANCIQ9NVI1 1328 aa18.49■□□□□ 0.55
ERCC1-211ENST00000590701 FRAT2O75474 233 aaPredicted RBP18.49■□□□□ 0.55
ERCC1-211ENST00000590701 HOXD10P28358 340 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms