RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 FRAT2O75474 233 aaPredicted RBP27.32■■□□□ 1.96
DDX39A-215ENST00000590696 GRIK5Q16478 980 aa27.32■■□□□ 1.96
DDX39A-215ENST00000590696 FKTNO75072 461 aa27.31■■□□□ 1.96
DDX39A-215ENST00000590696 ALDH1L2Q3SY69 923 aa27.31■■□□□ 1.96
DDX39A-215ENST00000590696 IFNL1Q8IU54 200 aa27.31■■□□□ 1.96
DDX39A-215ENST00000590696 CDCA7LQ96GN5 454 aa27.31■■□□□ 1.96
DDX39A-215ENST00000590696 TCP10L2B9ZVM9 353 aa27.3■■□□□ 1.96
DDX39A-215ENST00000590696 ANKRD13AQ8IZ07 590 aa27.3■■□□□ 1.96
DDX39A-215ENST00000590696 TBC1D22AQ8WUA7 517 aa27.3■■□□□ 1.96
DDX39A-215ENST00000590696 BCAMP50895 628 aa27.29■■□□□ 1.96
DDX39A-215ENST00000590696 IGF2BP3O00425 579 aaKnown RBP eCLIP27.28■■□□□ 1.96
DDX39A-215ENST00000590696 GJA5P36382 358 aa27.28■■□□□ 1.96
DDX39A-215ENST00000590696 TEPSINQ96N21 525 aa27.28■■□□□ 1.96
DDX39A-215ENST00000590696 SMC4Q9NTJ3 1288 aa27.28■■□□□ 1.96
DDX39A-215ENST00000590696 TNNI2P48788 182 aa27.27■■□□□ 1.96
DDX39A-215ENST00000590696 HDLBPQ00341 1268 aaKnown RBP27.27■■□□□ 1.96
DDX39A-215ENST00000590696 CDAN1Q8IWY9 1227 aa27.27■■□□□ 1.96
DDX39A-215ENST00000590696 TMEM39BQ9GZU3 492 aa27.27■■□□□ 1.96
DDX39A-215ENST00000590696 IFIT1P09914 478 aaKnown RBP27.26■■□□□ 1.95
DDX39A-215ENST00000590696 FGFR2P21802 821 aa27.26■■□□□ 1.95
DDX39A-215ENST00000590696 RFX5P48382 616 aaPredicted RBP27.26■■□□□ 1.95
DDX39A-215ENST00000590696 PUM3Q15397 648 aaKnown RBP27.26■■□□□ 1.95
DDX39A-215ENST00000590696 FBXO46Q6PJ61 603 aaPredicted RBP27.26■■□□□ 1.95
DDX39A-215ENST00000590696 LAMB1P07942 1786 aa27.25■■□□□ 1.95
DDX39A-215ENST00000590696 EYA2O00167 538 aa27.25■■□□□ 1.95
DDX39A-215ENST00000590696 TEKT1Q969V4 418 aa27.25■■□□□ 1.95
DDX39A-215ENST00000590696 ELP3Q9H9T3 547 aa27.25■■□□□ 1.95
DDX39A-215ENST00000590696 TNRC18O15417 2968 aaPredicted RBP27.24■■□□□ 1.95
DDX39A-215ENST00000590696 TRMT2AQ8IZ69 625 aaKnown RBP27.24■■□□□ 1.95
DDX39A-215ENST00000590696 KIF16BQ96L93 1317 aa27.23■■□□□ 1.95
DDX39A-215ENST00000590696 OTOFQ9HC10 1997 aa27.23■■□□□ 1.95
DDX39A-215ENST00000590696 OTUD7BQ6GQQ9 843 aa27.23■■□□□ 1.95
DDX39A-215ENST00000590696 OPTNQ96CV9 577 aa27.23■■□□□ 1.95
DDX39A-215ENST00000590696 CACNB3P54284 484 aa27.22■■□□□ 1.95
DDX39A-215ENST00000590696 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.22■■□□□ 1.95
DDX39A-215ENST00000590696 MRIQ9BWK5 157 aa27.22■■□□□ 1.95
DDX39A-215ENST00000590696 TESPA1A2RU30 521 aaPredicted RBP27.21■■□□□ 1.95
DDX39A-215ENST00000590696 SLC5A1P13866 664 aa27.21■■□□□ 1.95
DDX39A-215ENST00000590696 LPIN2Q92539 896 aa27.21■■□□□ 1.95
DDX39A-215ENST00000590696 ZDHHC15Q96MV8 337 aa27.21■■□□□ 1.95
DDX39A-215ENST00000590696 PTPN18Q99952 460 aa27.21■■□□□ 1.95
DDX39A-215ENST00000590696 NOB1Q9ULX3 412 aaKnown RBP27.21■■□□□ 1.95
DDX39A-215ENST00000590696 UBTFL1P0CB47 393 aaPredicted RBP27.2■■□□□ 1.94
DDX39A-215ENST00000590696 MAP3K9P80192 1104 aa27.2■■□□□ 1.94
DDX39A-215ENST00000590696 ATG9AQ7Z3C6 839 aa27.2■■□□□ 1.94
DDX39A-215ENST00000590696 SUGT1Q9Y2Z0 365 aa27.2■■□□□ 1.94
DDX39A-215ENST00000590696 MAST3O60307 1309 aa27.19■■□□□ 1.94
DDX39A-215ENST00000590696 CRHR2Q13324 411 aa27.19■■□□□ 1.94
DDX39A-215ENST00000590696 VGLL4Q14135 290 aa27.19■■□□□ 1.94
DDX39A-215ENST00000590696 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.19■■□□□ 1.94
DDX39A-215ENST00000590696 CNKSR2Q8WXI2 1034 aa27.19■■□□□ 1.94
DDX39A-215ENST00000590696 TMOD2Q9NZR1 351 aa27.19■■□□□ 1.94
DDX39A-215ENST00000590696 TRIM17Q9Y577 477 aa27.19■■□□□ 1.94
DDX39A-215ENST00000590696 CT47B1P0C2W7 299 aaPredicted RBP27.18■■□□□ 1.94
DDX39A-215ENST00000590696 APOBEC3HQ6NTF7 200 aaKnown RBP27.18■■□□□ 1.94
DDX39A-215ENST00000590696 MS4A4AQ96JQ5 239 aa27.18■■□□□ 1.94
DDX39A-215ENST00000590696 SIL1Q9H173 461 aa27.18■■□□□ 1.94
DDX39A-215ENST00000590696 HHIPL2Q6UWX4 724 aa27.17■■□□□ 1.94
DDX39A-215ENST00000590696 WDR66Q8TBY9 1149 aa27.17■■□□□ 1.94
DDX39A-215ENST00000590696 CSADQ9Y600 493 aa27.17■■□□□ 1.94
DDX39A-215ENST00000590696 OTOP1Q7RTM1 612 aa27.16■■□□□ 1.94
DDX39A-215ENST00000590696 FAM83AQ86UY5 434 aa27.16■■□□□ 1.94
DDX39A-215ENST00000590696 FBXO3Q9UK99 471 aa27.16■■□□□ 1.94
DDX39A-215ENST00000590696 FKBP1CQ5VVH2 108 aa27.15■■□□□ 1.94
DDX39A-215ENST00000590696 ERO1AQ96HE7 468 aa27.15■■□□□ 1.94
DDX39A-215ENST00000590696 API5Q9BZZ5 524 aaKnown RBP27.15■■□□□ 1.94
DDX39A-215ENST00000590696 CEP126Q9P2H0 1117 aa27.15■■□□□ 1.94
DDX39A-215ENST00000590696 CIAO1O76071 339 aa27.14■■□□□ 1.94
DDX39A-215ENST00000590696 GTF2A2P52657 109 aa27.14■■□□□ 1.94
DDX39A-215ENST00000590696 CD99L2Q8TCZ2 262 aa27.14■■□□□ 1.94
DDX39A-215ENST00000590696 BRI3BPQ8WY22 251 aa27.14■■□□□ 1.94
DDX39A-215ENST00000590696 OTUD5Q96G74 571 aa27.14■■□□□ 1.94
DDX39A-215ENST00000590696 LRRFIP2Q9Y608 721 aaKnown RBP27.14■■□□□ 1.94
DDX39A-215ENST00000590696 MYH13Q9UKX3 1938 aa27.14■■□□□ 1.93
DDX39A-215ENST00000590696 CCL15-CCL14A0A0B4J2E2 113 aa27.13■■□□□ 1.93
DDX39A-215ENST00000590696 CCL15Q16663 113 aa27.13■■□□□ 1.93
DDX39A-215ENST00000590696 ATP2B3Q16720 1220 aa27.13■■□□□ 1.93
DDX39A-215ENST00000590696 SP3Q02447 781 aa27.12■■□□□ 1.93
DDX39A-215ENST00000590696 HOOK2Q96ED9 719 aa27.12■■□□□ 1.93
DDX39A-215ENST00000590696 WRNIP1Q96S55 665 aa27.12■■□□□ 1.93
DDX39A-215ENST00000590696 HDAC5Q9UQL6 1122 aa27.12■■□□□ 1.93
DDX39A-215ENST00000590696 ZKSCAN4Q969J2 545 aaPredicted RBP27.11■■□□□ 1.93
DDX39A-215ENST00000590696 GNL3LQ9NVN8 582 aaKnown RBP27.11■■□□□ 1.93
DDX39A-215ENST00000590696 PA2G4Q9UQ80 394 aaKnown RBP27.11■■□□□ 1.93
DDX39A-215ENST00000590696 SNCAIPQ9Y6H5 919 aa27.11■■□□□ 1.93
DDX39A-215ENST00000590696 SPDYE5A6NIY4 337 aa27.1■■□□□ 1.93
DDX39A-215ENST00000590696 IL15P40933 162 aaPredicted RBP27.1■■□□□ 1.93
DDX39A-215ENST00000590696 PTPN22Q9Y2R2 807 aa27.1■■□□□ 1.93
DDX39A-215ENST00000590696 PRDX5P30044 214 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 RARSP54136 660 aaKnown RBP27.09■■□□□ 1.93
DDX39A-215ENST00000590696 TAF1CQ15572 869 aaPredicted RBP27.09■■□□□ 1.93
DDX39A-215ENST00000590696 DIXDC1Q155Q3 683 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 DCAF15Q66K64 600 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 FAM43AQ8N2R8 423 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 MEIS3Q99687 375 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 EFCC1Q9HA90 598 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 ZFYVE28Q9HCC9 887 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 DAGLAQ9Y4D2 1042 aa27.09■■□□□ 1.93
DDX39A-215ENST00000590696 RPAP1Q9BWH6 1393 aaPredicted RBP27.09■■□□□ 1.93
DDX39A-215ENST00000590696 CCER2I3L3R5 266 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms