RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 KAT14Q9H8E8 782 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 KARSQ15046 597 aaKnown RBP19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 PHKBQ93100 1093 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 CCDC43Q96MW1 224 aaKnown RBP19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 PYM1Q9BRP8 204 aaKnown RBP19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 CALCOCO1Q9P1Z2 691 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 CRB1P82279 1406 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 CRACR2AQ9BSW2 395 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 ANKIB1Q9P2G1 1089 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 NRBP1Q9UHY1 535 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 KCNH3Q9ULD8 1083 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 PIK3C2BO00750 1634 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 BMP15O95972 392 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 GNAT2P19087 354 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 CDR1P51861 262 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 PDE4BQ07343 736 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 CYP21A2P08686 494 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 SPECC1Q5M775 1068 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 MYL10Q9BUA6 226 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 IMPACTQ9P2X3 320 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 CCDC175P0C221 793 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 ADALQ6DHV7 355 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 TMEM87BQ96K49 555 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 ZNF287Q9HBT7 754 aa19.56■□□□□ 0.72
SMARCA4-215ENST00000590574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.56■□□□□ 0.721e-8■■■□□ 18.8
SMARCA4-215ENST00000590574 REREQ9P2R6 1566 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 ATP10DQ9P241 1426 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 MYOM1P52179 1685 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 UBA7P41226 1012 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 MAGEB6P1A0A0J9YX57 407 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 H0YHG0 523 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 MTIF2P46199 727 aaKnown RBP19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 LRRC24Q50LG9 513 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 PDLIM2Q96JY6 352 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 ELF2Q15723 593 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 MAP9Q49MG5 647 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 BAG1Q99933 345 aaPredicted RBP19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 ARFGAP3Q9NP61 516 aa19.55■□□□□ 0.72
SMARCA4-215ENST00000590574 KRT2P35908 639 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 KRT40Q6A162 431 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 TTLL7Q6ZT98 887 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 TTC14Q96N46 770 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 XPO4Q9C0E2 1151 aaKnown RBP19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 ARMT1Q9H993 441 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 LZTFL1Q9NQ48 299 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 RMND1Q9NWS8 449 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 MYSM1Q5VVJ2 828 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 ARHGEF25Q86VW2 580 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 DEPDC5O75140 1603 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 VWDEQ8N2E2 1590 aa19.54■□□□□ 0.72
SMARCA4-215ENST00000590574 CRNKL1Q9BZJ0 848 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 NEURL4Q96JN8 1562 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 RTL9Q8NET4 1388 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 ZPR1O75312 459 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 ADAMTS2O95450 1211 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 PDIA3P30101 505 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 TRIM47Q96LD4 638 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 KIAA1468Q9P260 1216 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 PCDHA7Q9UN72 937 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 CPS1P31327 1500 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 STAT6P42226 847 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 LRRC8AQ8IWT6 810 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 TCP11L1Q9NUJ3 509 aa19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 CTDP1Q9Y5B0 961 aaPredicted RBP19.53■□□□□ 0.72
SMARCA4-215ENST00000590574 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 MCM3P25205 808 aa19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 CTDSPL2Q05D32 466 aa19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 CACNA2D4Q7Z3S7 1137 aa19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 CUTAO60888 179 aa19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 LMAN1P49257 510 aa19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 GOLGA1Q92805 767 aa19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 NIP7Q9Y221 180 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMARCA4-215ENST00000590574 ATP6V1AP38606 617 aa19.52■□□□□ 0.71
SMARCA4-215ENST00000590574 FTOQ9C0B1 505 aaKnown RBP eCLIP19.52■□□□□ 0.712e-7■■■□□ 16.1
SMARCA4-215ENST00000590574 PFKFB1P16118 471 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 RILPL1Q5EBL4 403 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 NSUN7Q8NE18 718 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 CDC42BPGQ6DT37 1551 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 GOLGA6L10A6NI86 522 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 KIAA1524Q8TCG1 905 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 MRFAP1L1Q96HT8 127 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 CENPHQ9H3R5 247 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 ZNF532Q9HCE3 1301 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 POLR2DO15514 142 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 USO1O60763 962 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 PNOCQ13519 176 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 PUM3Q15397 648 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 DIS3L2Q8IYB7 885 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 TSG101Q99816 390 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 VAT1LQ9HCJ6 419 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 CLIC4Q9Y696 253 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 DLC1Q96QB1 1528 aa19.51■□□□□ 0.71
SMARCA4-215ENST00000590574 NDUFA8P51970 172 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms