RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
LSM12-203ENST00000590563 TDHQ8IZJ6 230 aa17.25■□□□□ 0.35
LSM12-203ENST00000590563 DIS3LQ8TF46 1054 aaKnown RBP17.25■□□□□ 0.35
LSM12-203ENST00000590563 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
LSM12-203ENST00000590563 ZMYND8Q9ULU4 1186 aaPredicted RBP17.25■□□□□ 0.35
LSM12-203ENST00000590563 CSADQ9Y600 493 aa17.25■□□□□ 0.35
LSM12-203ENST00000590563 SNAP23O00161 211 aa17.24■□□□□ 0.35
LSM12-203ENST00000590563 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
LSM12-203ENST00000590563 HOXD10P28358 340 aa17.24■□□□□ 0.35
LSM12-203ENST00000590563 TNFAIP1Q13829 316 aa17.24■□□□□ 0.35
LSM12-203ENST00000590563 SLAIN1Q8ND83 568 aa17.24■□□□□ 0.35
LSM12-203ENST00000590563 HELBQ8NG08 1087 aaPredicted RBP17.24■□□□□ 0.35
LSM12-203ENST00000590563 TMEM39BQ9GZU3 492 aa17.24■□□□□ 0.35
LSM12-203ENST00000590563 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
LSM12-203ENST00000590563 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
LSM12-203ENST00000590563 GABRQQ9UN88 632 aa17.24■□□□□ 0.35
LSM12-203ENST00000590563 MYH3P11055 1940 aa17.23■□□□□ 0.35
LSM12-203ENST00000590563 TMPOP42166 694 aaKnown RBP17.23■□□□□ 0.35
LSM12-203ENST00000590563 MAGEA10P43363 369 aaPredicted RBP17.23■□□□□ 0.35
LSM12-203ENST00000590563 SNAPC2Q13487 334 aa17.23■□□□□ 0.35
LSM12-203ENST00000590563 ERO1BQ86YB8 467 aa17.23■□□□□ 0.35
LSM12-203ENST00000590563 C7orf61Q8IZ16 206 aa17.23■□□□□ 0.35
LSM12-203ENST00000590563 PAWRQ96IZ0 340 aaKnown RBP17.23■□□□□ 0.35
LSM12-203ENST00000590563 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
LSM12-203ENST00000590563 IL1R1P14778 569 aa17.22■□□□□ 0.35
LSM12-203ENST00000590563 PPIL2Q13356 520 aa17.22■□□□□ 0.35
LSM12-203ENST00000590563 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
LSM12-203ENST00000590563 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
LSM12-203ENST00000590563 TDRD3Q9H7E2 651 aaKnown RBP17.22■□□□□ 0.35
LSM12-203ENST00000590563 PAK6Q9NQU5 681 aaPredicted RBP17.22■□□□□ 0.35
LSM12-203ENST00000590563 JAG2Q9Y219 1238 aa17.22■□□□□ 0.35
LSM12-203ENST00000590563 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
LSM12-203ENST00000590563 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
LSM12-203ENST00000590563 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
LSM12-203ENST00000590563 C15orf52Q6ZUT6 534 aaKnown RBP17.21■□□□□ 0.35
LSM12-203ENST00000590563 ANKRD23Q86SG2 305 aa17.21■□□□□ 0.35
LSM12-203ENST00000590563 DEFB118Q96PH6 123 aa17.21■□□□□ 0.35
LSM12-203ENST00000590563 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
LSM12-203ENST00000590563 EYSQ5T1H1 3165 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
LSM12-203ENST00000590563 INHAP05111 366 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 BCRP11274 1271 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 ELNP15502 786 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 SYN1P17600 705 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
LSM12-203ENST00000590563 CHRNDQ07001 517 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 MOGSQ13724 837 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
LSM12-203ENST00000590563 ZKSCAN4Q969J2 545 aaPredicted RBP17.2■□□□□ 0.34
LSM12-203ENST00000590563 PDHXO00330 501 aa17.19■□□□□ 0.34
LSM12-203ENST00000590563 CAPN2P17655 700 aa17.19■□□□□ 0.34
LSM12-203ENST00000590563 COL9A1P20849 921 aa17.19■□□□□ 0.34
LSM12-203ENST00000590563 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
LSM12-203ENST00000590563 MGAMO43451 1857 aa17.18■□□□□ 0.34
LSM12-203ENST00000590563 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
LSM12-203ENST00000590563 ADCY3O60266 1144 aa17.18■□□□□ 0.34
LSM12-203ENST00000590563 FCGRTP55899 365 aa17.18■□□□□ 0.34
LSM12-203ENST00000590563 NECAB2Q7Z6G3 386 aa17.18■□□□□ 0.34
LSM12-203ENST00000590563 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
LSM12-203ENST00000590563 WRNIP1Q96S55 665 aa17.18■□□□□ 0.34
LSM12-203ENST00000590563 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
LSM12-203ENST00000590563 ITGA6P23229 1130 aa17.17■□□□□ 0.34
LSM12-203ENST00000590563 KCNJ4P48050 445 aa17.17■□□□□ 0.34
LSM12-203ENST00000590563 FAM109BQ6ICB4 259 aaPredicted RBP17.17■□□□□ 0.34
LSM12-203ENST00000590563 DZIP1LQ8IYY4 767 aaKnown RBP17.17■□□□□ 0.34
LSM12-203ENST00000590563 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
LSM12-203ENST00000590563 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
LSM12-203ENST00000590563 TAF5LO75529 589 aa17.16■□□□□ 0.34
LSM12-203ENST00000590563 FLT3LGP49771 235 aa17.16■□□□□ 0.34
LSM12-203ENST00000590563 PXYLP1Q8TE99 480 aa17.16■□□□□ 0.34
LSM12-203ENST00000590563 UBE2OQ9C0C9 1292 aaKnown RBP17.16■□□□□ 0.34
LSM12-203ENST00000590563 RAPGEFL1Q9UHV5 662 aa17.16■□□□□ 0.34
LSM12-203ENST00000590563 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
LSM12-203ENST00000590563 PPATQ06203 517 aa17.15■□□□□ 0.34
LSM12-203ENST00000590563 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
LSM12-203ENST00000590563 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
LSM12-203ENST00000590563 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
LSM12-203ENST00000590563 TNNI2P48788 182 aa17.14■□□□□ 0.33
LSM12-203ENST00000590563 IRF5Q13568 498 aa17.14■□□□□ 0.33
LSM12-203ENST00000590563 FAM161BQ96MY7 647 aa17.14■□□□□ 0.33
LSM12-203ENST00000590563 MPHOSPH8Q99549 860 aa17.14■□□□□ 0.33
LSM12-203ENST00000590563 TTF2Q9UNY4 1162 aaKnown RBP17.14■□□□□ 0.33
LSM12-203ENST00000590563 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.33
LSM12-203ENST00000590563 CYP2C8P10632 490 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 CRKP46108 304 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 CACNB3P54284 484 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 GPAT2Q6NUI2 795 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 ANKLE1Q8NAG6 615 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.13■□□□□ 0.33
LSM12-203ENST00000590563 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 MUC3AQ02505 3323 aa17.13■□□□□ 0.33
LSM12-203ENST00000590563 H7C1W4 665 aa17.12■□□□□ 0.33
LSM12-203ENST00000590563 CSF1RP07333 972 aa17.12■□□□□ 0.33
LSM12-203ENST00000590563 INPP5BP32019 993 aa17.12■□□□□ 0.33
LSM12-203ENST00000590563 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
LSM12-203ENST00000590563 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
LSM12-203ENST00000590563 GRIK5Q16478 980 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms