RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 ZSCAN25Q6NSZ9 544 aa20.32■□□□□ 0.84
GCDH-212ENST00000590530 NSUN4Q96CB9 384 aaKnown RBP20.32■□□□□ 0.84
GCDH-212ENST00000590530 EYA3Q99504 573 aa20.32■□□□□ 0.84
GCDH-212ENST00000590530 CHD4Q14839 1912 aa20.31■□□□□ 0.84
GCDH-212ENST00000590530 ZBTB22O15209 634 aa20.31■□□□□ 0.84
GCDH-212ENST00000590530 ZNF277Q9NRM2 450 aaPredicted RBP20.31■□□□□ 0.84
GCDH-212ENST00000590530 BCS1LQ9Y276 419 aa20.31■□□□□ 0.84
GCDH-212ENST00000590530 HSPD1P10809 573 aaKnown RBP20.3■□□□□ 0.84
GCDH-212ENST00000590530 NECTIN1Q15223 517 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 FBXW7Q969H0 707 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 ARMT1Q9H993 441 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 MBD4O95243 580 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 COL9A3Q14050 684 aaPredicted RBP20.3■□□□□ 0.84
GCDH-212ENST00000590530 LCORLQ8N3X6 602 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 CERS5Q8N5B7 392 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 WDR66Q8TBY9 1149 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 FHDC1Q9C0D6 1143 aaPredicted RBP20.3■□□□□ 0.84
GCDH-212ENST00000590530 SALL1Q9NSC2 1324 aa20.3■□□□□ 0.84
GCDH-212ENST00000590530 DYNLL1P63167 89 aaKnown RBP20.29■□□□□ 0.84
GCDH-212ENST00000590530 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
GCDH-212ENST00000590530 DIXDC1Q155Q3 683 aa20.29■□□□□ 0.84
GCDH-212ENST00000590530 TTLL5Q6EMB2 1281 aa20.29■□□□□ 0.84
GCDH-212ENST00000590530 RTKN2Q8IZC4 609 aa20.29■□□□□ 0.84
GCDH-212ENST00000590530 SNX14Q9Y5W7 946 aa20.29■□□□□ 0.84
GCDH-212ENST00000590530 COL4A5P29400 1685 aa20.29■□□□□ 0.84
GCDH-212ENST00000590530 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
GCDH-212ENST00000590530 FAM205AQ6ZU69 1335 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 PPIP5K2O43314 1243 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 PRKAB2O43741 272 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 ECE2O60344 883 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 MFSD14BQ5SR56 506 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 NAA16Q6N069 864 aaPredicted RBP20.28■□□□□ 0.84
GCDH-212ENST00000590530 STRBPQ96SI9 672 aaKnown RBP20.28■□□□□ 0.84
GCDH-212ENST00000590530 YDJCA8MPS7 323 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 G3V3G9 751 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 MCM2P49736 904 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 DCAF8Q5TAQ9 597 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 CREB3L3Q68CJ9 461 aa20.28■□□□□ 0.84
GCDH-212ENST00000590530 BRCA1P38398 1863 aaKnown RBP20.28■□□□□ 0.84
GCDH-212ENST00000590530 SLC27A2O14975 620 aa20.27■□□□□ 0.84
GCDH-212ENST00000590530 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
GCDH-212ENST00000590530 PSMD1Q99460 953 aa20.27■□□□□ 0.84
GCDH-212ENST00000590530 NFKBIEO00221 500 aa20.26■□□□□ 0.83
GCDH-212ENST00000590530 ADCK5Q3MIX3 580 aa20.26■□□□□ 0.83
GCDH-212ENST00000590530 AIDAQ96BJ3 306 aa20.26■□□□□ 0.83
GCDH-212ENST00000590530 RIOK1Q9BRS2 568 aaKnown RBP20.26■□□□□ 0.83
GCDH-212ENST00000590530 SLKQ9H2G2 1235 aaPredicted RBP20.26■□□□□ 0.83
GCDH-212ENST00000590530 F8W031 263 aaPredicted RBP20.26■□□□□ 0.83
GCDH-212ENST00000590530 NEK4P51957 841 aa20.26■□□□□ 0.83
GCDH-212ENST00000590530 DZIP1Q86YF9 867 aaKnown RBP20.26■□□□□ 0.83
GCDH-212ENST00000590530 DSCC1Q9BVC3 393 aa20.26■□□□□ 0.83
GCDH-212ENST00000590530 PODNQ7Z5L7 613 aa20.25■□□□□ 0.83
GCDH-212ENST00000590530 SUPT20HQ8NEM7 779 aa20.25■□□□□ 0.83
GCDH-212ENST00000590530 ANP32EQ9BTT0 268 aa20.25■□□□□ 0.83
GCDH-212ENST00000590530 TM6SF1Q9BZW5 370 aa20.25■□□□□ 0.83
GCDH-212ENST00000590530 CPA1P15085 419 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 PRELPP51888 382 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 RNF20Q5VTR2 975 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 SPTY2D1Q68D10 685 aaPredicted RBP20.24■□□□□ 0.83
GCDH-212ENST00000590530 EPB41L4AQ9HCS5 686 aaPredicted RBP20.24■□□□□ 0.83
GCDH-212ENST00000590530 SCN9AQ15858 1988 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 FGAP02671 866 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 CYP21A2P08686 494 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 ZKSCAN1P17029 563 aaPredicted RBP20.24■□□□□ 0.83
GCDH-212ENST00000590530 DDIT3P35638 169 aa20.24■□□□□ 0.83
GCDH-212ENST00000590530 ZGPATQ8N5A5 531 aaKnown RBP20.24■□□□□ 0.83
GCDH-212ENST00000590530 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
GCDH-212ENST00000590530 AATFQ9NY61 560 aaKnown RBP eCLIP20.24■□□□□ 0.83
GCDH-212ENST00000590530 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
GCDH-212ENST00000590530 RASSF7Q02833 373 aa20.23■□□□□ 0.83
GCDH-212ENST00000590530 LARGE2Q8N3Y3 721 aa20.23■□□□□ 0.83
GCDH-212ENST00000590530 RPAP1Q9BWH6 1393 aaPredicted RBP20.23■□□□□ 0.83
GCDH-212ENST00000590530 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 TSGA10IPQ3SY00 556 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 GRIPAP1Q4V328 841 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 DACT2Q5SW24 774 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 SDR42E1Q8WUS8 393 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 SYT17Q9BSW7 474 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 APPP05067 770 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 HAND2P61296 217 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 SOGA3Q5TF21 947 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 STOX1Q6ZVD7 989 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 TBC1D22AQ8WUA7 517 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 CIZ1Q9ULV3 898 aaPredicted RBP20.22■□□□□ 0.83
GCDH-212ENST00000590530 SLC4A4Q9Y6R1 1079 aa20.22■□□□□ 0.83
GCDH-212ENST00000590530 SMIM22K7EJ46 135 aa20.21■□□□□ 0.83
GCDH-212ENST00000590530 SCNN1DP51172 638 aa20.21■□□□□ 0.83
GCDH-212ENST00000590530 TAOK3Q9H2K8 898 aa20.21■□□□□ 0.83
GCDH-212ENST00000590530 CHMP5Q9NZZ3 219 aa20.21■□□□□ 0.83
GCDH-212ENST00000590530 RAD17O75943 681 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 HSP90AA1P07900 732 aaKnown RBP20.2■□□□□ 0.82
GCDH-212ENST00000590530 IARSP41252 1262 aaKnown RBP20.2■□□□□ 0.82
GCDH-212ENST00000590530 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 TTC14Q96N46 770 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 USP17L3A6NCW0 530 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 USP17L4A6NCW7 530 aa20.2■□□□□ 0.82
GCDH-212ENST00000590530 PATL2C9JE40 543 aaKnown RBP20.2■□□□□ 0.82
GCDH-212ENST00000590530 STRIP1Q5VSL9 837 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms