RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 PPP1R42Q7Z4L9 355 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 CTCFLQ8NI51 663 aaPredicted RBP8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 ATRIPQ8WXE1 791 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 ZKSCAN4Q969J2 545 aaPredicted RBP8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 FAM227BQ96M60 508 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 VEZTQ9HBM0 779 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 SAMM50Q9Y512 469 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 GTPBP6O43824 516 aaPredicted RBP8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 MTF1Q14872 753 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 HSP90AA4PQ58FG1 418 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 SSH3Q8TE77 659 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 TBC1D22AQ8WUA7 517 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 GBP3Q9H0R5 595 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 FANCLQ9NW38 375 aa8.84□□□□□ -0.99
NEDD4L-229ENST00000590506 UBTFL1P0CB47 393 aaPredicted RBP8.83□□□□□ -1
NEDD4L-229ENST00000590506 NF2P35240 595 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 SARNPP82979 210 aaKnown RBP8.83□□□□□ -1
NEDD4L-229ENST00000590506 SULT6B1Q6IMI4 303 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 JMYQ8N9B5 988 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 MAP4K1Q92918 833 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 ZNF396Q96N95 335 aaPredicted RBP8.83□□□□□ -1
NEDD4L-229ENST00000590506 A1CFQ9NQ94 594 aaKnown RBP8.83□□□□□ -1
NEDD4L-229ENST00000590506 ARAP3Q8WWN8 1544 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 GLRX3O76003 335 aaKnown RBP8.83□□□□□ -1
NEDD4L-229ENST00000590506 IRAK1P51617 712 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 NMIQ13287 307 aaPredicted RBP8.83□□□□□ -1
NEDD4L-229ENST00000590506 KIF4BQ2VIQ3 1234 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 C11orf91Q3C1V1 193 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 BCAS4Q8TDM0 211 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 CALR3Q96L12 384 aaKnown RBP8.83□□□□□ -1
NEDD4L-229ENST00000590506 GDAP1L1Q96MZ0 367 aa8.83□□□□□ -1
NEDD4L-229ENST00000590506 NEDD4P46934 1319 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 FRMD3A2A2Y4 597 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 KIF3CO14782 793 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 CALRP27797 417 aaKnown RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 DDR1Q08345 913 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 FLIIQ13045 1269 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 ZNF569Q5MCW4 686 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 NOA1Q8NC60 698 aaKnown RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 SEC62Q99442 399 aaKnown RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 USP44Q9H0E7 712 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 INTS13Q9NVM9 706 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 ODF2LQ9ULJ1 636 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 PTPRMP28827 1452 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 IKBKBO14920 756 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 STX10O60499 249 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 SHOX2O60902 331 aaPredicted RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 GCFC2P16383 781 aaKnown RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 HOXD11P31277 338 aaPredicted RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 FNTAP49354 379 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 AARSP49588 968 aaKnown RBP eCLIP8.82□□□□□ -1
NEDD4L-229ENST00000590506 INHBEP58166 350 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 SEMA3FQ13275 785 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 TEX11Q8IYF3 940 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 TC2NQ8N9U0 490 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 TACO1Q9BSH4 297 aaKnown RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 LRRC2Q9BYS8 371 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 RBM28Q9NW13 759 aaKnown RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 HPCAL4Q9UM19 191 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 SHTN1A0MZ66 631 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 CTAGE15A4D2H0 777 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 CHUKO15111 745 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 CTAGE8P0CG41 777 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 GGCXP38435 758 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 AKAP17AQ02040 695 aaKnown RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 ACTN3Q08043 901 aaPredicted RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 OS9Q13438 667 aaPredicted RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 IDI1Q13907 227 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 PREPLQ4J6C6 727 aaPredicted RBP8.82□□□□□ -1
NEDD4L-229ENST00000590506 CTAGE6Q86UF2 777 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 CTAGE4Q8IX94 777 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 FAM76AQ8TAV0 307 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 COG3Q96JB2 828 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 STK31Q9BXU1 1019 aa8.82□□□□□ -1
NEDD4L-229ENST00000590506 NEXMIFQ5QGS0 1516 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 ATP7BP35670 1465 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 SOWAHDA6NJG2 315 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 ZNF202O95125 648 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
NEDD4L-229ENST00000590506 Q6ZUG5 572 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 ILDR1Q86SU0 546 aaPredicted RBP8.81□□□□□ -1
NEDD4L-229ENST00000590506 IQCA1Q86XH1 822 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 CENPHQ9H3R5 247 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 TSPYL4Q9UJ04 414 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 MTMR7Q9Y216 660 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 CRYBG1Q9Y4K1 1723 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 KIF5CO60282 957 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 CCDC175P0C221 793 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 GNGT1P63211 74 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 MYL5Q02045 173 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 TBX2Q13207 712 aaPredicted RBP8.81□□□□□ -1
NEDD4L-229ENST00000590506 STIM1Q13586 685 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 ADALQ6DHV7 355 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 KIRREL3Q8IZU9 778 aa8.81□□□□□ -1
NEDD4L-229ENST00000590506 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
NEDD4L-229ENST00000590506 ALDH8A1Q9H2A2 487 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms