RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 CENPFP49454 3210 aa13.54□□□□□ -0.24
TUBD1-210ENST00000590498 MKI67P46013 3256 aaKnown RBP13.54□□□□□ -0.24
TUBD1-210ENST00000590498 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
TUBD1-210ENST00000590498 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
TUBD1-210ENST00000590498 LMBR1LQ6UX01 489 aa13.53□□□□□ -0.24
TUBD1-210ENST00000590498 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
TUBD1-210ENST00000590498 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-210ENST00000590498 COL1A1P02452 1464 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-210ENST00000590498 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-210ENST00000590498 FKBP1AP62942 108 aaKnown RBP13.52□□□□□ -0.25
TUBD1-210ENST00000590498 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.25
TUBD1-210ENST00000590498 OTOP1Q7RTM1 612 aa13.52□□□□□ -0.25
TUBD1-210ENST00000590498 SALL2Q9Y467 1007 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-210ENST00000590498 PLIN1O60240 522 aa13.51□□□□□ -0.25
TUBD1-210ENST00000590498 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
TUBD1-210ENST00000590498 ZBTB48P10074 688 aaPredicted RBP13.51□□□□□ -0.25
TUBD1-210ENST00000590498 INHBEP58166 350 aa13.51□□□□□ -0.25
TUBD1-210ENST00000590498 RASA3Q14644 834 aa13.51□□□□□ -0.25
TUBD1-210ENST00000590498 GRIK5Q16478 980 aa13.51□□□□□ -0.25
TUBD1-210ENST00000590498 KAZALD1Q96I82 304 aa13.51□□□□□ -0.25
TUBD1-210ENST00000590498 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
TUBD1-210ENST00000590498 PDE4DIPQ5VU43 2346 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 FAM205AQ6ZU69 1335 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 TESPA1A2RU30 521 aaPredicted RBP13.5□□□□□ -0.25
TUBD1-210ENST00000590498 PPP1R12BO60237 982 aaPredicted RBP13.5□□□□□ -0.25
TUBD1-210ENST00000590498 CRHR2Q13324 411 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 ZNF804AQ7Z570 1209 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 TDRD7Q8NHU6 1098 aaKnown RBP13.5□□□□□ -0.25
TUBD1-210ENST00000590498 TEPSINQ96N21 525 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 PUS3Q9BZE2 481 aaKnown RBP13.5□□□□□ -0.25
TUBD1-210ENST00000590498 VEZTQ9HBM0 779 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
TUBD1-210ENST00000590498 GYG1P46976 350 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 SUPT20HL1Q3ZLR7 823 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 LDHAL6AQ6ZMR3 332 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 WDR63Q8IWG1 891 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 CD99L2Q8TCZ2 262 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 FAM84BQ96KN1 310 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-210ENST00000590498 TDRD3Q9H7E2 651 aaKnown RBP13.49□□□□□ -0.25
TUBD1-210ENST00000590498 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
TUBD1-210ENST00000590498 LAMB1P07942 1786 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 BRCA2P51587 3418 aa13.49□□□□□ -0.25
TUBD1-210ENST00000590498 UNCXA6NJT0 531 aa13.48□□□□□ -0.25
TUBD1-210ENST00000590498 GRM8O00222 908 aa13.48□□□□□ -0.25
TUBD1-210ENST00000590498 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.48□□□□□ -0.25
TUBD1-210ENST00000590498 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
TUBD1-210ENST00000590498 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 MYO1BO43795 1136 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 RBM5P52756 815 aaKnown RBP eCLIP13.47□□□□□ -0.25
TUBD1-210ENST00000590498 CCDC57Q2TAC2 916 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 ANKRD13AQ8IZ07 590 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 SUCLG2Q96I99 432 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 ELP3Q9H9T3 547 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 CNNM1Q9NRU3 951 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 RIPOR2Q9Y4F9 1068 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
TUBD1-210ENST00000590498 HIBADHP31937 336 aaKnown RBP13.46□□□□□ -0.25
TUBD1-210ENST00000590498 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
TUBD1-210ENST00000590498 UBE4AQ14139 1066 aa13.46□□□□□ -0.25
TUBD1-210ENST00000590498 MFSD14BQ5SR56 506 aa13.46□□□□□ -0.25
TUBD1-210ENST00000590498 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.25
TUBD1-210ENST00000590498 BRI3BPQ8WY22 251 aa13.46□□□□□ -0.25
TUBD1-210ENST00000590498 OPTNQ96CV9 577 aa13.46□□□□□ -0.25
TUBD1-210ENST00000590498 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.25
TUBD1-210ENST00000590498 SERPINA10Q9UK55 444 aa13.46□□□□□ -0.25
TUBD1-210ENST00000590498 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.25
TUBD1-210ENST00000590498 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
TUBD1-210ENST00000590498 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-210ENST00000590498 EN2P19622 333 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-210ENST00000590498 FBXO33Q7Z6M2 555 aa13.45□□□□□ -0.26
TUBD1-210ENST00000590498 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
TUBD1-210ENST00000590498 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
TUBD1-210ENST00000590498 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 SEC24BO95487 1268 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 CRKP46108 304 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 SP3Q02447 781 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 TAF7LQ5H9L4 462 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.44□□□□□ -0.26
TUBD1-210ENST00000590498 ARMC5Q96C12 935 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 ERO1AQ96HE7 468 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 EFCC1Q9HA90 598 aa13.44□□□□□ -0.26
TUBD1-210ENST00000590498 C9orf78Q9NZ63 289 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-210ENST00000590498 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-210ENST00000590498 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
TUBD1-210ENST00000590498 UTYO14607 1347 aa13.43□□□□□ -0.26
TUBD1-210ENST00000590498 CACNB3P54284 484 aa13.43□□□□□ -0.26
TUBD1-210ENST00000590498 VGLL4Q14135 290 aa13.43□□□□□ -0.26
TUBD1-210ENST00000590498 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
TUBD1-210ENST00000590498 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
TUBD1-210ENST00000590498 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
TUBD1-210ENST00000590498 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
TUBD1-210ENST00000590498 MAP3K9P80192 1104 aa13.42□□□□□ -0.26
TUBD1-210ENST00000590498 OTUD7BQ6GQQ9 843 aa13.42□□□□□ -0.26
TUBD1-210ENST00000590498 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
TUBD1-210ENST00000590498 VGLL2Q8N8G2 317 aa13.42□□□□□ -0.26
TUBD1-210ENST00000590498 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
TUBD1-210ENST00000590498 CACNA1FO60840 1977 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms