RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 GPR162Q16538 588 aa11.29□□□□□ -0.6
ZNF397-208ENST00000590470 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
ZNF397-208ENST00000590470 NAA16Q6N069 864 aaPredicted RBP11.29□□□□□ -0.6
ZNF397-208ENST00000590470 DZIP1Q86YF9 867 aaKnown RBP11.29□□□□□ -0.6
ZNF397-208ENST00000590470 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
ZNF397-208ENST00000590470 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
ZNF397-208ENST00000590470 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
ZNF397-208ENST00000590470 NSUN4Q96CB9 384 aaKnown RBP11.29□□□□□ -0.6
ZNF397-208ENST00000590470 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
ZNF397-208ENST00000590470 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
ZNF397-208ENST00000590470 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
ZNF397-208ENST00000590470 SHTN1A0MZ66 631 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 USP17L3A6NCW0 530 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 USP17L4A6NCW7 530 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 HIP1O00291 1037 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 PSMD14O00487 310 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 MBD4O95243 580 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 MCMDC2Q4G0Z9 681 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 ZSCAN25Q6NSZ9 544 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 USP17L1Q7RTZ2 530 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 PODNQ7Z5L7 613 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 LCORLQ8N3X6 602 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 RUFY2Q8WXA3 655 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 APPBP2Q92624 585 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
ZNF397-208ENST00000590470 PDS5AQ29RF7 1337 aaKnown RBP11.28□□□□□ -0.6
ZNF397-208ENST00000590470 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
ZNF397-208ENST00000590470 GPAA1O43292 621 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
ZNF397-208ENST00000590470 CXCL9Q07325 125 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 UBE3CQ15386 1083 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 USP26Q9BXU7 913 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 HELLSQ9NRZ9 838 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
ZNF397-208ENST00000590470 ZNRF3Q9ULT6 936 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 TTF2Q9UNY4 1162 aaKnown RBP11.27□□□□□ -0.61
ZNF397-208ENST00000590470 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 ZNF541Q9H0D2 1346 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.61
ZNF397-208ENST00000590470 BAZ2AQ9UIF9 1905 aaKnown RBP11.27□□□□□ -0.61
ZNF397-208ENST00000590470 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
ZNF397-208ENST00000590470 FOXP2O15409 715 aa11.26□□□□□ -0.61
ZNF397-208ENST00000590470 STRIP1Q5VSL9 837 aa11.26□□□□□ -0.61
ZNF397-208ENST00000590470 SPTY2D1Q68D10 685 aaPredicted RBP11.26□□□□□ -0.61
ZNF397-208ENST00000590470 JDP2Q8WYK2 163 aa11.26□□□□□ -0.61
ZNF397-208ENST00000590470 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
ZNF397-208ENST00000590470 TAF6LQ9Y6J9 622 aa11.26□□□□□ -0.61
ZNF397-208ENST00000590470 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
ZNF397-208ENST00000590470 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 SMIM22K7EJ46 135 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 EVX2Q03828 476 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 STK11IPQ8N1F8 1099 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 ZGPATQ8N5A5 531 aaKnown RBP11.25□□□□□ -0.61
ZNF397-208ENST00000590470 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
ZNF397-208ENST00000590470 TBC1D22AQ8WUA7 517 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
ZNF397-208ENST00000590470 C22orf23Q9BZE7 217 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 RBM8AQ9Y5S9 174 aaKnown RBP11.25□□□□□ -0.61
ZNF397-208ENST00000590470 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
ZNF397-208ENST00000590470 LAMA4Q16363 1823 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 NAV1Q8NEY1 1877 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 REC8O95072 547 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 APPP05067 770 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
ZNF397-208ENST00000590470 BTDP43251 543 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
ZNF397-208ENST00000590470 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
ZNF397-208ENST00000590470 CIAPIN1Q6FI81 312 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
ZNF397-208ENST00000590470 RIOK1Q9BRS2 568 aaKnown RBP11.24□□□□□ -0.61
ZNF397-208ENST00000590470 EPB41L4AQ9HCS5 686 aaPredicted RBP11.24□□□□□ -0.61
ZNF397-208ENST00000590470 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
ZNF397-208ENST00000590470 DAGLAQ9Y4D2 1042 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 MROH7-TTC4A0A0A0MT08 1334 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 RAD50Q92878 1312 aa11.24□□□□□ -0.61
ZNF397-208ENST00000590470 CYP2D7A0A087X1C5 515 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 VIL1P09327 827 aaKnown RBP11.23□□□□□ -0.61
ZNF397-208ENST00000590470 LMNB1P20700 586 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 CRKP46108 304 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 CACNB3P54284 484 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
ZNF397-208ENST00000590470 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 TBC1D32Q96NH3 1257 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 UPF2Q9HAU5 1272 aaKnown RBP11.23□□□□□ -0.61
ZNF397-208ENST00000590470 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
ZNF397-208ENST00000590470 GSG1L2A8MUP6 293 aa11.22□□□□□ -0.61
ZNF397-208ENST00000590470 FZD9O00144 591 aa11.22□□□□□ -0.61
ZNF397-208ENST00000590470 ZBTB22O15209 634 aa11.22□□□□□ -0.61
ZNF397-208ENST00000590470 EGFRP00533 1210 aa11.22□□□□□ -0.61
ZNF397-208ENST00000590470 CPA1P15085 419 aa11.22□□□□□ -0.61
ZNF397-208ENST00000590470 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms