RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 SPDYE2BA6NHP3 402 aa22.94■■□□□ 1.26
MBD1-223ENST00000590215 LDHBP07195 334 aaKnown RBP22.94■■□□□ 1.26
MBD1-223ENST00000590215 SPDYE6P0CI01 402 aa22.94■■□□□ 1.26
MBD1-223ENST00000590215 CRKP46108 304 aa22.94■■□□□ 1.26
MBD1-223ENST00000590215 SMC5Q8IY18 1101 aa22.94■■□□□ 1.26
MBD1-223ENST00000590215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.94■■□□□ 1.26
MBD1-223ENST00000590215 IGHDP01880 384 aa22.93■■□□□ 1.26
MBD1-223ENST00000590215 SPTY2D1Q68D10 685 aaPredicted RBP22.93■■□□□ 1.26
MBD1-223ENST00000590215 HHIPL2Q6UWX4 724 aa22.93■■□□□ 1.26
MBD1-223ENST00000590215 PRMT6Q96LA8 375 aaPredicted RBP22.93■■□□□ 1.26
MBD1-223ENST00000590215 GGA3Q9NZ52 723 aa22.93■■□□□ 1.26
MBD1-223ENST00000590215 PCDHAC2Q9Y5I4 1007 aa22.93■■□□□ 1.26
MBD1-223ENST00000590215 IGSF3O75054 1194 aa22.92■■□□□ 1.26
MBD1-223ENST00000590215 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
MBD1-223ENST00000590215 CDC37L1Q7L3B6 337 aa22.92■■□□□ 1.26
MBD1-223ENST00000590215 TEKT1Q969V4 418 aa22.92■■□□□ 1.26
MBD1-223ENST00000590215 ZDHHC15Q96MV8 337 aa22.92■■□□□ 1.26
MBD1-223ENST00000590215 CYP2E1P05181 493 aaPredicted RBP22.91■■□□□ 1.26
MBD1-223ENST00000590215 ZAP70P43403 619 aa22.91■■□□□ 1.26
MBD1-223ENST00000590215 ANGEL2Q5VTE6 544 aaKnown RBP22.91■■□□□ 1.26
MBD1-223ENST00000590215 DCPSQ96C86 337 aaKnown RBP22.91■■□□□ 1.26
MBD1-223ENST00000590215 SNRKQ9NRH2 765 aa22.91■■□□□ 1.26
MBD1-223ENST00000590215 ABCF2Q9UG63 623 aa22.91■■□□□ 1.26
MBD1-223ENST00000590215 ATP5JP18859 108 aa22.9■■□□□ 1.26
MBD1-223ENST00000590215 TBC1D9Q6ZT07 1266 aa22.9■■□□□ 1.26
MBD1-223ENST00000590215 ERICH6Q7L0X2 663 aa22.9■■□□□ 1.26
MBD1-223ENST00000590215 KRT26Q7Z3Y9 468 aa22.9■■□□□ 1.26
MBD1-223ENST00000590215 FAM163AQ96GL9 167 aaPredicted RBP22.9■■□□□ 1.26
MBD1-223ENST00000590215 POLR2AP24928 1970 aaKnown RBP22.9■■□□□ 1.26
MBD1-223ENST00000590215 AOX1Q06278 1338 aa22.89■■□□□ 1.26
MBD1-223ENST00000590215 HSPA6P17066 643 aa22.89■■□□□ 1.25
MBD1-223ENST00000590215 RBM5P52756 815 aaKnown RBP eCLIP22.89■■□□□ 1.25
MBD1-223ENST00000590215 APOBEC3HQ6NTF7 200 aaKnown RBP22.89■■□□□ 1.25
MBD1-223ENST00000590215 GLIS2Q9BZE0 524 aaPredicted RBP22.89■■□□□ 1.25
MBD1-223ENST00000590215 MYO1BO43795 1136 aa22.88■■□□□ 1.25
MBD1-223ENST00000590215 DIXDC1Q155Q3 683 aa22.88■■□□□ 1.25
MBD1-223ENST00000590215 ANKRD45Q5TZF3 282 aa22.88■■□□□ 1.25
MBD1-223ENST00000590215 USP48Q86UV5 1035 aa22.88■■□□□ 1.25
MBD1-223ENST00000590215 SULF1Q8IWU6 871 aa22.88■■□□□ 1.25
MBD1-223ENST00000590215 ZNF384Q8TF68 577 aa22.88■■□□□ 1.25
MBD1-223ENST00000590215 GAKO14976 1311 aa22.87■■□□□ 1.25
MBD1-223ENST00000590215 APLP1P51693 650 aa22.87■■□□□ 1.25
MBD1-223ENST00000590215 SPDYE2Q495Y8 402 aa22.87■■□□□ 1.25
MBD1-223ENST00000590215 APOBEC3FQ8IUX4 373 aaKnown RBP22.87■■□□□ 1.25
MBD1-223ENST00000590215 NSUN4Q96CB9 384 aaKnown RBP22.87■■□□□ 1.25
MBD1-223ENST00000590215 BCL11AQ9H165 835 aa22.87■■□□□ 1.25
MBD1-223ENST00000590215 ECHDC1Q9NTX5 307 aa22.87■■□□□ 1.25
MBD1-223ENST00000590215 DAGLAQ9Y4D2 1042 aa22.87■■□□□ 1.25
MBD1-223ENST00000590215 TRAF5O00463 557 aa22.86■■□□□ 1.25
MBD1-223ENST00000590215 MECOMQ03112 1051 aa22.86■■□□□ 1.25
MBD1-223ENST00000590215 DZIP1Q86YF9 867 aaKnown RBP22.86■■□□□ 1.25
MBD1-223ENST00000590215 SLF2Q8IX21 1173 aa22.86■■□□□ 1.25
MBD1-223ENST00000590215 PIH1D3Q9NQM4 214 aaKnown RBP22.86■■□□□ 1.25
MBD1-223ENST00000590215 LRP2BPQ9P2M1 347 aa22.86■■□□□ 1.25
MBD1-223ENST00000590215 SALL3Q9BXA9 1300 aa22.85■■□□□ 1.25
MBD1-223ENST00000590215 ECM29Q5VYK3 1845 aa22.85■■□□□ 1.25
MBD1-223ENST00000590215 ADM5C9JUS6 153 aa22.85■■□□□ 1.25
MBD1-223ENST00000590215 ZNF70Q9UC06 446 aaPredicted RBP22.85■■□□□ 1.25
MBD1-223ENST00000590215 NDUFB9Q9Y6M9 179 aa22.85■■□□□ 1.25
MBD1-223ENST00000590215 GSTO1P78417 241 aa22.84■■□□□ 1.25
MBD1-223ENST00000590215 FMR1Q06787 632 aaKnown RBP eCLIP22.84■■□□□ 1.25
MBD1-223ENST00000590215 GPATCH3Q96I76 525 aa22.84■■□□□ 1.25
MBD1-223ENST00000590215 HAUS7Q99871 368 aa22.84■■□□□ 1.25
MBD1-223ENST00000590215 ANTXR1Q9H6X2 564 aa22.84■■□□□ 1.25
MBD1-223ENST00000590215 TDRD3Q9H7E2 651 aaKnown RBP22.84■■□□□ 1.25
MBD1-223ENST00000590215 RAI14Q9P0K7 980 aa22.84■■□□□ 1.25
MBD1-223ENST00000590215 ZBTB47Q9UFB7 747 aaPredicted RBP22.84■■□□□ 1.25
MBD1-223ENST00000590215 TTC41PQ6P2S7 1318 aa22.83■■□□□ 1.25
MBD1-223ENST00000590215 CLRN2A0PK11 232 aa22.83■■□□□ 1.25
MBD1-223ENST00000590215 NUCB1Q02818 461 aa22.83■■□□□ 1.25
MBD1-223ENST00000590215 TTF1Q15361 905 aaPredicted RBP22.83■■□□□ 1.25
MBD1-223ENST00000590215 FKBP1CQ5VVH2 108 aa22.83■■□□□ 1.25
MBD1-223ENST00000590215 TMED8Q6PL24 325 aaPredicted RBP22.83■■□□□ 1.25
MBD1-223ENST00000590215 OTUD7AQ8TE49 926 aaPredicted RBP22.83■■□□□ 1.25
MBD1-223ENST00000590215 BOLA2Q9H3K6 86 aa22.83■■□□□ 1.25
MBD1-223ENST00000590215 MROH7-TTC4A0A0A0MT08 1334 aa22.82■■□□□ 1.24
MBD1-223ENST00000590215 GPR75-ASB3A0A0A6YYF3 556 aa22.82■■□□□ 1.24
MBD1-223ENST00000590215 LDHCP07864 332 aa22.82■■□□□ 1.24
MBD1-223ENST00000590215 CST9Q5W186 159 aa22.82■■□□□ 1.24
MBD1-223ENST00000590215 DLK2Q6UY11 383 aa22.82■■□□□ 1.24
MBD1-223ENST00000590215 PPP2R3BQ9Y5P8 575 aa22.82■■□□□ 1.24
MBD1-223ENST00000590215 MYH2Q9UKX2 1941 aa22.82■■□□□ 1.24
MBD1-223ENST00000590215 MX1P20591 662 aa22.81■■□□□ 1.24
MBD1-223ENST00000590215 CDC42EP5Q6NZY7 148 aa22.81■■□□□ 1.24
MBD1-223ENST00000590215 DEFB129Q9H1M3 183 aa22.81■■□□□ 1.24
MBD1-223ENST00000590215 CREBZFQ9NS37 354 aa22.81■■□□□ 1.24
MBD1-223ENST00000590215 SCAF8Q9UPN6 1271 aaKnown RBP22.81■■□□□ 1.24
MBD1-223ENST00000590215 TRPM7Q96QT4 1865 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 TMEM88BA6NKF7 163 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 TNFAIP1Q13829 316 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 CHD1LQ86WJ1 897 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 PI4K2BQ8TCG2 481 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 CDCA5Q96FF9 252 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 DNAJC2Q99543 621 aaKnown RBP22.8■■□□□ 1.24
MBD1-223ENST00000590215 VEZTQ9HBM0 779 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 PAG1Q9NWQ8 432 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 STAP2Q9UGK3 403 aa22.8■■□□□ 1.24
MBD1-223ENST00000590215 MYO5AQ9Y4I1 1855 aaKnown RBP22.79■■□□□ 1.24
MBD1-223ENST00000590215 GOLIM4O00461 696 aa22.79■■□□□ 1.24
MBD1-223ENST00000590215 IDH1O75874 414 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms