RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CABP5Q9NP86 173 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 TCEAL9Q9UHQ7 104 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 PTGS1P23219 599 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
RETREG3-208ENST00000589797 FAM47AQ5JRC9 791 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 USP28Q96RU2 1077 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 FILIP1LQ4L180 1135 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
RETREG3-208ENST00000589797 AGLP35573 1532 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 BAG3O95817 575 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 STX1AQ16623 288 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 CCDC112Q8NEF3 446 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 TTLL11Q8NHH1 800 aa16.82■□□□□ 0.28
RETREG3-208ENST00000589797 NR1I2O75469 434 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 HIBADHP31937 336 aaKnown RBP16.81■□□□□ 0.28
RETREG3-208ENST00000589797 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
RETREG3-208ENST00000589797 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 STX17P56962 302 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 SCARF1Q14162 830 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 SUSD4Q5VX71 490 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
RETREG3-208ENST00000589797 CUL4AQ13619 759 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 DHX58Q96C10 678 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-208ENST00000589797 CLCN1P35523 988 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 CHRNDQ07001 517 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 PDIA6Q15084 440 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 PARP10Q53GL7 1025 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 HEATR3Q7Z4Q2 680 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 PPFIBP1Q86W92 1011 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 CNBD1Q8NA66 436 aa16.81■□□□□ 0.28
RETREG3-208ENST00000589797 STAMQ92783 540 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 USP17L12C9JPN9 530 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 USP17L21D6R901 530 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 ZNF445P59923 1031 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 MTX1Q13505 466 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 SEC63Q9UGP8 760 aaKnown RBP16.8■□□□□ 0.28
RETREG3-208ENST00000589797 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
RETREG3-208ENST00000589797 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.8■□□□□ 0.28
RETREG3-208ENST00000589797 KCNG4Q8TDN1 519 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 AIFM3Q96NN9 605 aa16.8■□□□□ 0.28
RETREG3-208ENST00000589797 CTAGE5O15320 804 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 DSCC1Q9BVC3 393 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 ZKSCAN5Q9Y2L8 839 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 DLC1Q96QB1 1528 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 SMTNL1A8MU46 457 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 LDHBP07195 334 aaKnown RBP16.79■□□□□ 0.28
RETREG3-208ENST00000589797 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
RETREG3-208ENST00000589797 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
RETREG3-208ENST00000589797 UFL1O94874 794 aa16.78■□□□□ 0.28
RETREG3-208ENST00000589797 TNNT1P13805 278 aa16.78■□□□□ 0.28
RETREG3-208ENST00000589797 IDEP14735 1019 aa16.78■□□□□ 0.28
RETREG3-208ENST00000589797 PDIA3P30101 505 aaKnown RBP16.78■□□□□ 0.28
RETREG3-208ENST00000589797 ZNF174Q15697 407 aa16.78■□□□□ 0.28
RETREG3-208ENST00000589797 ZC3H12CQ9C0D7 883 aaKnown RBP16.78■□□□□ 0.28
RETREG3-208ENST00000589797 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
RETREG3-208ENST00000589797 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
RETREG3-208ENST00000589797 ENOX2Q16206 610 aaKnown RBP16.78■□□□□ 0.28
RETREG3-208ENST00000589797 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
RETREG3-208ENST00000589797 RGS12O14924 1447 aa16.78■□□□□ 0.28
RETREG3-208ENST00000589797 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.28
RETREG3-208ENST00000589797 MCM7P33993 719 aa16.77■□□□□ 0.28
RETREG3-208ENST00000589797 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.28
RETREG3-208ENST00000589797 KRT40Q6A162 431 aa16.77■□□□□ 0.28
RETREG3-208ENST00000589797 DIS3L2Q8IYB7 885 aaKnown RBP16.77■□□□□ 0.28
RETREG3-208ENST00000589797 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.28
RETREG3-208ENST00000589797 LDHCP07864 332 aa16.77■□□□□ 0.28
RETREG3-208ENST00000589797 TOP1P11387 765 aaKnown RBP16.77■□□□□ 0.28
RETREG3-208ENST00000589797 ST5P78524 1137 aa16.77■□□□□ 0.28
RETREG3-208ENST00000589797 GPR101Q96P66 508 aaPredicted RBP16.77■□□□□ 0.28
RETREG3-208ENST00000589797 A0A0G2JLW4 131 aa16.77■□□□□ 0.27
RETREG3-208ENST00000589797 MCAMP43121 646 aa16.77■□□□□ 0.27
RETREG3-208ENST00000589797 ERFEQ4G0M1 354 aa16.77■□□□□ 0.27
RETREG3-208ENST00000589797 OFD1O75665 1012 aa16.77■□□□□ 0.27
RETREG3-208ENST00000589797 UBA7P41226 1012 aa16.77■□□□□ 0.27
RETREG3-208ENST00000589797 PTPN14Q15678 1187 aa16.77■□□□□ 0.27
RETREG3-208ENST00000589797 TECPR2O15040 1411 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 MYO5BQ9ULV0 1848 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 ERBB4Q15303 1308 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
RETREG3-208ENST00000589797 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 SMARCE1Q969G3 411 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 NYXQ9GZU5 481 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 VPS54Q9P1Q0 977 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
RETREG3-208ENST00000589797 MSL1Q68DK7 614 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 PIH1D3Q9NQM4 214 aaKnown RBP16.76■□□□□ 0.27
RETREG3-208ENST00000589797 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.76■□□□□ 0.27
RETREG3-208ENST00000589797 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
RETREG3-208ENST00000589797 V9GYY5 206 aaPredicted RBP16.76■□□□□ 0.27
RETREG3-208ENST00000589797 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
RETREG3-208ENST00000589797 TMTC2Q8N394 836 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms