RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 CCDC102BQ68D86 513 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 PHF14O94880 888 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 PDCP20941 246 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 RESTQ13127 1097 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 FAM98CQ17RN3 349 aaKnown RBP12.88□□□□□ -0.35
GFAP-216ENST00000589701 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
GFAP-216ENST00000589701 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
GFAP-216ENST00000589701 ANTXR2P58335 489 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
GFAP-216ENST00000589701 CLGNO14967 610 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
GFAP-216ENST00000589701 PDE8BO95263 885 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 FDPSP14324 419 aaKnown RBP12.87□□□□□ -0.35
GFAP-216ENST00000589701 TRIM28Q13263 835 aaKnown RBP12.87□□□□□ -0.35
GFAP-216ENST00000589701 DDB1Q16531 1140 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
GFAP-216ENST00000589701 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 FUCA2Q9BTY2 467 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
GFAP-216ENST00000589701 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 ZNF532Q9HCE3 1301 aa12.87□□□□□ -0.35
GFAP-216ENST00000589701 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 PRC1O43663 620 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 PFKFB2O60825 505 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 TBC1D10CQ8IV04 446 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
GFAP-216ENST00000589701 PRKAB2O43741 272 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 BCAMP50895 628 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 NUP62CLQ9H1M0 184 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 NOL7Q9UMY1 257 aaKnown RBP12.86□□□□□ -0.35
GFAP-216ENST00000589701 TAF1P21675 1872 aa12.86□□□□□ -0.35
GFAP-216ENST00000589701 GOLGA8BA8MQT2 603 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 B4E1Z4 1266 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 APPBP2Q92624 585 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 ZKSCAN3Q9BRR0 538 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 GTPBP4Q9BZE4 634 aaKnown RBP12.85□□□□□ -0.35
GFAP-216ENST00000589701 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
GFAP-216ENST00000589701 NUP98P52948 1817 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 ADD1P35611 737 aaKnown RBP12.85□□□□□ -0.35
GFAP-216ENST00000589701 CTDSPL2Q05D32 466 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 IMMTQ16891 758 aaKnown RBP12.85□□□□□ -0.35
GFAP-216ENST00000589701 CYB5R4Q7L1T6 521 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
GFAP-216ENST00000589701 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 ZNF213O14771 459 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 SIK1P57059 783 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 ANO6Q4KMQ2 910 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 CMTR1Q8N1G2 835 aaKnown RBP12.85□□□□□ -0.35
GFAP-216ENST00000589701 MAGEB6Q8N7X4 407 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 SMARCC2Q8TAQ2 1214 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 PHKBQ93100 1093 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
GFAP-216ENST00000589701 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 ARMT1Q9H993 441 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 ZKSCAN5Q9Y2L8 839 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 MRVI1Q9Y6F6 885 aa12.85□□□□□ -0.35
GFAP-216ENST00000589701 PDE8AO60658 829 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 BAG6P46379 1132 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 MPHOSPH8Q99549 860 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 JAG2Q9Y219 1238 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 COL4A1P02462 1669 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
GFAP-216ENST00000589701 PDE6AP16499 860 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 ADD2P35612 726 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 TYRO3Q06418 890 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 MAP3K11Q16584 847 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 RRP12Q5JTH9 1297 aaKnown RBP12.84□□□□□ -0.35
GFAP-216ENST00000589701 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
GFAP-216ENST00000589701 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
GFAP-216ENST00000589701 DISP2A7MBM2 1401 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 RALYLQ86SE5 291 aaKnown RBP12.83□□□□□ -0.36
GFAP-216ENST00000589701 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 SCAND2PQ9GZW5 306 aaPredicted RBP12.83□□□□□ -0.36
GFAP-216ENST00000589701 TOMM22Q9NS69 142 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
GFAP-216ENST00000589701 ME1P48163 572 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 EIF5P55010 431 aaKnown RBP12.83□□□□□ -0.36
GFAP-216ENST00000589701 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
GFAP-216ENST00000589701 MB21D2Q8IYB1 491 aaPredicted RBP12.83□□□□□ -0.36
GFAP-216ENST00000589701 RFX7Q2KHR2 1363 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms