RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 M0R2C6 588 aa17.44■□□□□ 0.38
NPC1-207ENST00000588867 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
NPC1-207ENST00000588867 MAST3O60307 1309 aa17.44■□□□□ 0.38
NPC1-207ENST00000588867 USP17L3A6NCW0 530 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 USP17L4A6NCW7 530 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 YDJCA8MPS7 323 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 USP17L1Q7RTZ2 530 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 JDP2Q8WYK2 163 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 CCDC88AQ3V6T2 1871 aa17.43■□□□□ 0.38
NPC1-207ENST00000588867 CCDC171Q6TFL3 1326 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 LTBP3Q9NS15 1303 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
NPC1-207ENST00000588867 ZNF384Q8TF68 577 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 C22orf23Q9BZE7 217 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 SCN9AQ15858 1988 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 RAD17O75943 681 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 YBX3P16989 372 aaKnown RBP eCLIP17.42■□□□□ 0.383e-6■■■■□ 19.7
NPC1-207ENST00000588867 PTH1RQ03431 593 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 ADGRA1Q86SQ6 560 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 MIGA1Q8NAN2 632 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
NPC1-207ENST00000588867 COL4A5P29400 1685 aa17.41■□□□□ 0.38
NPC1-207ENST00000588867 DACT2Q5SW24 774 aa17.41■□□□□ 0.38
NPC1-207ENST00000588867 LSG1Q9H089 658 aaKnown RBP17.41■□□□□ 0.38
NPC1-207ENST00000588867 GPAA1O43292 621 aa17.4■□□□□ 0.38
NPC1-207ENST00000588867 GSTO1P78417 241 aa17.4■□□□□ 0.38
NPC1-207ENST00000588867 DIXDC1Q155Q3 683 aa17.4■□□□□ 0.38
NPC1-207ENST00000588867 PRELPP51888 382 aa17.4■□□□□ 0.38
NPC1-207ENST00000588867 TTF2Q9UNY4 1162 aaKnown RBP17.4■□□□□ 0.38
NPC1-207ENST00000588867 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.37
NPC1-207ENST00000588867 IGSF3O75054 1194 aa17.39■□□□□ 0.37
NPC1-207ENST00000588867 MBD4O95243 580 aa17.39■□□□□ 0.37
NPC1-207ENST00000588867 GPR162Q16538 588 aa17.39■□□□□ 0.37
NPC1-207ENST00000588867 ARMT1Q9H993 441 aa17.39■□□□□ 0.37
NPC1-207ENST00000588867 SUGT1Q9Y2Z0 365 aa17.39■□□□□ 0.37
NPC1-207ENST00000588867 LDHCP07864 332 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 VPS53Q5VIR6 699 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 KIAA0825Q8IV33 1275 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
NPC1-207ENST00000588867 SRCAPQ6ZRS2 3230 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 PSMD14O00487 310 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 FKBP1AP62942 108 aaKnown RBP17.38■□□□□ 0.37
NPC1-207ENST00000588867 TMED8Q6PL24 325 aaPredicted RBP17.38■□□□□ 0.37
NPC1-207ENST00000588867 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 TBC1D32Q96NH3 1257 aa17.38■□□□□ 0.37
NPC1-207ENST00000588867 STRBPQ96SI9 672 aaKnown RBP17.38■□□□□ 0.37
NPC1-207ENST00000588867 APPP05067 770 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 HSPD1P10809 573 aaKnown RBP17.37■□□□□ 0.37
NPC1-207ENST00000588867 SCNN1DP51172 638 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 DYNLL1P63167 89 aaKnown RBP17.37■□□□□ 0.37
NPC1-207ENST00000588867 CXCL9Q07325 125 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 NOL10Q9BSC4 688 aaKnown RBP17.37■□□□□ 0.37
NPC1-207ENST00000588867 RBM19Q9Y4C8 960 aaKnown RBP17.37■□□□□ 0.37
NPC1-207ENST00000588867 MYH2Q9UKX2 1941 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 MAST2Q6P0Q8 1798 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 LMNB1P20700 586 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 MCCP23508 829 aa17.37■□□□□ 0.37
NPC1-207ENST00000588867 EPB41L2O43491 1005 aaKnown RBP17.36■□□□□ 0.37
NPC1-207ENST00000588867 VIL1P09327 827 aaKnown RBP17.36■□□□□ 0.37
NPC1-207ENST00000588867 CIAPIN1Q6FI81 312 aa17.36■□□□□ 0.37
NPC1-207ENST00000588867 RSBN1LQ6PCB5 846 aaPredicted RBP17.36■□□□□ 0.37
NPC1-207ENST00000588867 RBM8AQ9Y5S9 174 aaKnown RBP17.36■□□□□ 0.37
NPC1-207ENST00000588867 MROH7-TTC4A0A0A0MT08 1334 aa17.36■□□□□ 0.37
NPC1-207ENST00000588867 BAG3O95817 575 aa17.35■□□□□ 0.37
NPC1-207ENST00000588867 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
NPC1-207ENST00000588867 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
NPC1-207ENST00000588867 RIOK1Q9BRS2 568 aaKnown RBP17.35■□□□□ 0.37
NPC1-207ENST00000588867 DSCC1Q9BVC3 393 aa17.35■□□□□ 0.37
NPC1-207ENST00000588867 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
NPC1-207ENST00000588867 SLC4A4Q9Y6R1 1079 aa17.35■□□□□ 0.37
NPC1-207ENST00000588867 PRKAB2O43741 272 aa17.35■□□□□ 0.37
NPC1-207ENST00000588867 TNIP1Q15025 636 aa17.35■□□□□ 0.37
NPC1-207ENST00000588867 PATL2C9JE40 543 aaKnown RBP17.34■□□□□ 0.37
NPC1-207ENST00000588867 HSPA4P34932 840 aa17.34■□□□□ 0.37
NPC1-207ENST00000588867 BTDP43251 543 aa17.34■□□□□ 0.37
NPC1-207ENST00000588867 RBM5P52756 815 aaKnown RBP eCLIP17.34■□□□□ 0.37
NPC1-207ENST00000588867 PSME4Q14997 1843 aa17.34■□□□□ 0.37
NPC1-207ENST00000588867 MYO3BQ8WXR4 1341 aa17.34■□□□□ 0.37
NPC1-207ENST00000588867 TEKT1Q969V4 418 aa17.34■□□□□ 0.37
NPC1-207ENST00000588867 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
NPC1-207ENST00000588867 ZNF646O15015 1829 aaPredicted RBP17.34■□□□□ 0.37
NPC1-207ENST00000588867 FZD9O00144 591 aa17.33■□□□□ 0.37
NPC1-207ENST00000588867 GNAT2P19087 354 aa17.33■□□□□ 0.37
NPC1-207ENST00000588867 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.37
NPC1-207ENST00000588867 GPR75-ASB3A0A0A6YYF3 556 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 FOXP2O15409 715 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 CRKP46108 304 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 NECTIN1Q15223 517 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 SDR42E1Q8WUS8 393 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 PALD1Q9ULE6 856 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 DAGLAQ9Y4D2 1042 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 GJA3Q9Y6H8 435 aa17.33■□□□□ 0.36
NPC1-207ENST00000588867 SBF1O95248 1867 aa17.32■□□□□ 0.36
NPC1-207ENST00000588867 FGAP02671 866 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms