RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
SMAD4-206ENST00000588860 TMEM106CQ9BVX2 250 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 TAF6LQ9Y6J9 622 aa10.45□□□□□ -0.74
SMAD4-206ENST00000588860 IDH1O75874 414 aaKnown RBP10.44□□□□□ -0.74
SMAD4-206ENST00000588860 HSPD1P10809 573 aaKnown RBP10.44□□□□□ -0.74
SMAD4-206ENST00000588860 PLCG2P16885 1265 aa10.44□□□□□ -0.74
SMAD4-206ENST00000588860 ADD2P35612 726 aa10.44□□□□□ -0.74
SMAD4-206ENST00000588860 COL13A1Q5TAT6 717 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-206ENST00000588860 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-206ENST00000588860 CELF1Q92879 486 aaKnown RBP10.44□□□□□ -0.74
SMAD4-206ENST00000588860 ZSCAN31Q96LW9 406 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-206ENST00000588860 MTFR1LQ9H019 292 aa10.44□□□□□ -0.74
SMAD4-206ENST00000588860 BSDC1Q9NW68 430 aaPredicted RBP10.44□□□□□ -0.74
SMAD4-206ENST00000588860 MYH15Q9Y2K3 1946 aa10.44□□□□□ -0.74
SMAD4-206ENST00000588860 KIAA1551Q9HCM1 1747 aa10.44□□□□□ -0.74
SMAD4-206ENST00000588860 BAZ2AQ9UIF9 1905 aaKnown RBP10.43□□□□□ -0.74
SMAD4-206ENST00000588860 LARGE1O95461 756 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 CYP21A2P08686 494 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 PDE6AP16499 860 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 BCAMP50895 628 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 RPS8P62241 208 aaKnown RBP10.43□□□□□ -0.74
SMAD4-206ENST00000588860 RASGRF1Q13972 1273 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 ANKRD1Q15327 319 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 TXNRD1Q16881 649 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 SLC9C2Q5TAH2 1124 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 CNBD1Q8NA66 436 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
SMAD4-206ENST00000588860 WWC3Q9ULE0 1092 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 MINPP1Q9UNW1 487 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 NRXN2Q9P2S2 1712 aa10.43□□□□□ -0.74
SMAD4-206ENST00000588860 LAMB1P07942 1786 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 LRRC37AA6NMS7 1700 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 ZNF532Q9HCE3 1301 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 GPAA1O43292 621 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 GYS1P13807 737 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 PKP1Q13835 747 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 UBE4AQ14139 1066 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 UBE3CQ15386 1083 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 STOX1Q6ZVD7 989 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 CCDC83Q8IWF9 413 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 NEK1Q96PY6 1258 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 PUS7LQ9H0K6 701 aaKnown RBP10.42□□□□□ -0.74
SMAD4-206ENST00000588860 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-206ENST00000588860 GNL3LQ9NVN8 582 aaKnown RBP10.42□□□□□ -0.74
SMAD4-206ENST00000588860 CTNNA3Q9UI47 895 aa10.42□□□□□ -0.74
SMAD4-206ENST00000588860 COL1A1P02452 1464 aaPredicted RBP10.42□□□□□ -0.74
SMAD4-206ENST00000588860 BAG4O95429 457 aaKnown RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 PTMSP20962 102 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 HMGB2P26583 209 aaKnown RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 DEKP35659 375 aaKnown RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 GYG1P46976 350 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 IRX5P78411 483 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 ST5P78524 1137 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 MAP3K12Q12852 859 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 COL9A3Q14050 684 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 PRR5LQ6MZQ0 368 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 ANKRD2Q9GZV1 360 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 TPCN1Q9ULQ1 816 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 IQSEC3Q9UPP2 1182 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 SMC3Q9UQE7 1217 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 ZDHHC9Q9Y397 364 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 COL11A2P13942 1736 aaPredicted RBP10.41□□□□□ -0.74
SMAD4-206ENST00000588860 QSER1Q2KHR3 1735 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 TIAM2Q8IVF5 1701 aa10.41□□□□□ -0.74
SMAD4-206ENST00000588860 ECM29Q5VYK3 1845 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 ZNF804BA4D1E1 1349 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 A0A0G2JLW4 131 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 TCRBV5S4A2TA0A5A2 114 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 E7EWF7 191 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 GOLGA6L22H0YM25 854 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
SMAD4-206ENST00000588860 TM4SF1P30408 202 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 TOB2Q14106 344 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-206ENST00000588860 ME3Q16798 604 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 IMMTQ16891 758 aaKnown RBP10.4□□□□□ -0.74
SMAD4-206ENST00000588860 CAVIN4Q5BKX8 364 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-206ENST00000588860 TTLL5Q6EMB2 1281 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 CLEC17AQ6ZS10 378 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 Q6ZUG5 572 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 VPS37DQ86XT2 251 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 TNS4Q8IZW8 715 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 MAGEB6Q8N7X4 407 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 NECAB1Q8N987 351 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 FOXD4L4Q8WXT5 416 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-206ENST00000588860 RPGRQ92834 1020 aaKnown RBP10.4□□□□□ -0.74
SMAD4-206ENST00000588860 GPBP1L1Q9HC44 474 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-206ENST00000588860 STK32BQ9NY57 414 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 MYH2Q9UKX2 1941 aa10.4□□□□□ -0.74
SMAD4-206ENST00000588860 CDK5RAP2Q96SN8 1893 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 WTIPA6NIX2 430 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-206ENST00000588860 FOXP2O15409 715 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 TRAK2O60296 914 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 BRD1O95696 1058 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 SERPINB2P05120 415 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 HAND2P61296 217 aa10.39□□□□□ -0.75
SMAD4-206ENST00000588860 FGD1P98174 961 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms