RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 MRPS27Q92552 414 aaKnown RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 FAM89AQ96GI7 184 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 NACAP1Q9BZK3 213 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 SPTLC3Q9NUV7 552 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 BTG4Q9NY30 223 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ORC3Q9UBD5 711 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-228ENST00000588781 ASAP1Q9ULH1 1129 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 TAF6LQ9Y6J9 622 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 NDUFB9Q9Y6M9 179 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 RIC1Q4ADV7 1423 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
SPIDR-228ENST00000588781 LAMA4Q16363 1823 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 SMTNL1A8MU46 457 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 RGL2O15211 777 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 FGAP02671 866 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 ADORA1P30542 326 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 IGHMBP2P38935 993 aaKnown RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 CCT2P78371 535 aaKnown RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 GNL2Q13823 731 aaKnown RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 CAMK4Q16566 473 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 ADALQ6DHV7 355 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 SARM1Q6SZW1 724 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 KRT27Q7Z3Y8 459 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 TMTC2Q8N394 836 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 FSIP1Q8NA03 581 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 AIDAQ96BJ3 306 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 PGBD1Q96JS3 809 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 CDC5LQ99459 802 aaKnown RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 MPHOSPH8Q99549 860 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 LRRC2Q9BYS8 371 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 TRIM5Q9C035 493 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 KRT23Q9C075 422 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 PDCL3Q9H2J4 239 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 RNF41Q9H4P4 317 aaPredicted RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 HOOK1Q9UJC3 728 aaKnown RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 ANGEL1Q9UNK9 670 aaKnown RBP8.34□□□□□ -1.07
SPIDR-228ENST00000588781 ZNF652Q9Y2D9 606 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 MYH7P12883 1935 aa8.34□□□□□ -1.07
SPIDR-228ENST00000588781 MYH3P11055 1940 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 MYH15Q9Y2K3 1946 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 UQCRHLA0A096LP55 91 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC196A0A1B0GTZ2 297 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 MYO1BO43795 1136 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 IGSF3O75054 1194 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 NR1I2O75469 434 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 CTDNEP1O95476 244 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 APPP05067 770 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 UQCRHP07919 91 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 METAP2P50579 478 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPIDR-228ENST00000588781 ZNF75DP51815 510 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 RCAN1P53805 252 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 PPP2R5BQ15173 497 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 SAFBQ15424 915 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPIDR-228ENST00000588781 SLC9C2Q5TAH2 1124 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 FAM173BQ6P4H8 233 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 CKAP2LQ8IYA6 745 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 ZNF34Q8IZ26 560 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 FBXO18Q8NFZ0 1043 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC34Q96HJ3 373 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 MRFAP1L1Q96HT8 127 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 BPIFA3Q9BQP9 254 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 SDF4Q9BRK5 362 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 UTP14AQ9BVJ6 771 aaKnown RBP8.33□□□□□ -1.08
SPIDR-228ENST00000588781 BCL11BQ9C0K0 894 aaPredicted RBP8.33□□□□□ -1.08
SPIDR-228ENST00000588781 TNS1Q9HBL0 1735 aaKnown RBP8.33□□□□□ -1.08
SPIDR-228ENST00000588781 GNL3LQ9NVN8 582 aaKnown RBP8.33□□□□□ -1.08
SPIDR-228ENST00000588781 NWD2Q9ULI1 1742 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 ITGB4P16144 1822 aa8.33□□□□□ -1.08
SPIDR-228ENST00000588781 STK36Q9NRP7 1315 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 ARAP2Q8WZ64 1704 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 ERICH2A1L162 156 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC69A6NI79 296 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
SPIDR-228ENST00000588781 SPTLC2O15270 562 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 IDH1O75874 414 aaKnown RBP8.32□□□□□ -1.08
SPIDR-228ENST00000588781 PDE6AP16499 860 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 GPTP24298 496 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
SPIDR-228ENST00000588781 LIFRP42702 1097 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 MCAMP43121 646 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 NT5C2P49902 561 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 GSDMDP57764 484 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 EN1Q05925 392 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-228ENST00000588781 VPS72Q15906 364 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC102BQ68D86 513 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 NFXL1Q6ZNB6 911 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 PLA2G4DQ86XP0 818 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 MYRIPQ8NFW9 859 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 TIGD1Q96MW7 591 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 USP28Q96RU2 1077 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 NAPBQ9H115 298 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 GREM2Q9H772 168 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC87Q9NVE4 849 aa8.32□□□□□ -1.08
SPIDR-228ENST00000588781 KIF2AO00139 706 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-228ENST00000588781 SH2B2O14492 632 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-228ENST00000588781 ZBTB43O43298 467 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms