RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SCRN1Q12765 414 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 CCDC129Q6ZRS4 1044 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 ZBTB38Q8NAP3 1195 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 JARID2Q92833 1246 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 TCEANC2Q96MN5 208 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 TFIP11Q9UBB9 837 aaKnown RBP16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 MRVI1Q9Y6F6 885 aa16.42■□□□□ 0.22
NEDD4L-223ENST00000588516 A0A0G2JLW4 131 aa16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 PTPDC1A2A3K4 754 aa16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 A1BGP04217 495 aa16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 STX1AQ16623 288 aa16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 BRAPQ7Z569 592 aa16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 MYRIPQ8NFW9 859 aa16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 APPBP2Q92624 585 aa16.41■□□□□ 0.22
NEDD4L-223ENST00000588516 MAST3O60307 1309 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 JAK2O60674 1132 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 CDKL5O76039 1030 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 CSF1RP07333 972 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 TGFB2P61812 414 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 TRDNQ13061 729 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 ANO6Q4KMQ2 910 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 CPLX2Q6PUV4 134 aaKnown RBP16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 SMARCC1Q92922 1105 aaPredicted RBP16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 RRAGCQ9HB90 399 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
NEDD4L-223ENST00000588516 A0A1W2PQ27 194 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 A0A1W2PQ64 194 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 A0A1W2PQD8 194 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 MMP10P09238 476 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 UQCRFS1P1P0C7P4 283 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 ZNF165P49910 485 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 ZRSR1Q15695 479 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 WASHC4Q2M389 1173 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 DRC7Q8IY82 874 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 SMC1BQ8NDV3 1235 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 CBX8Q9HC52 389 aa16.39■□□□□ 0.21
NEDD4L-223ENST00000588516 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 FAM160A1Q05DH4 1040 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 TPRNQ4KMQ1 711 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 SARM1Q6SZW1 724 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 CCAR1Q8IX12 1150 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 KIAA1524Q8TCG1 905 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 KCNG4Q8TDN1 519 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 DDX11Q96FC9 970 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 XAGE2Q96GT9 111 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 RTEL1Q9NZ71 1219 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 TAF6LQ9Y6J9 622 aa16.38■□□□□ 0.21
NEDD4L-223ENST00000588516 MAP3K15Q6ZN16 1313 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 SALL1Q9NSC2 1324 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 ZNF213O14771 459 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 YEATS4O95619 227 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 TPM4P67936 248 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 CAMK4Q16566 473 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 GIGYF2Q6Y7W6 1299 aaKnown RBP16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 PGBD1Q96JS3 809 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 TRIM5Q9C035 493 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 TBC1D2BQ9UPU7 963 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 MYH7P12883 1935 aa16.37■□□□□ 0.21
NEDD4L-223ENST00000588516 CPLX1O14810 134 aa16.36■□□□□ 0.21
NEDD4L-223ENST00000588516 DPEP1P16444 411 aa16.36■□□□□ 0.21
NEDD4L-223ENST00000588516 ZNF75DP51815 510 aa16.36■□□□□ 0.21
NEDD4L-223ENST00000588516 ATP2B3Q16720 1220 aa16.36■□□□□ 0.21
NEDD4L-223ENST00000588516 NAP1L2Q9ULW6 460 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-223ENST00000588516 BECN2A8MW95 431 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 GNPATO15228 680 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 NR1I2O75469 434 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 UBE3CQ15386 1083 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 SF3A1Q15459 793 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 ADALQ6DHV7 355 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 PLA2G4DQ86XP0 818 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 CKAP2LQ8IYA6 745 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 CEP57L1Q8IYX8 460 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 MRPS27Q92552 414 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 MRFAP1L1Q96HT8 127 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 C8orf76Q96K31 380 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
NEDD4L-223ENST00000588516 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
NEDD4L-223ENST00000588516 M0R2C6 588 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms