RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 TBC1D2Q9BYX2 928 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 SNX14Q9Y5W7 946 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 MAST3O60307 1309 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 SALL1Q9NSC2 1324 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 SLC27A2O14975 620 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 GPAA1O43292 621 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 ZBTB7AO95365 584 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 LDHCP07864 332 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 CYP7A1P22680 504 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 CHRNA5P30532 468 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 NEK4P51957 841 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 GSTO1P78417 241 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 CHAF1AQ13111 956 aaPredicted RBP12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 R3HDM1Q15032 1099 aaKnown RBP12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 CCDC129Q6ZRS4 1044 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 PUS7LQ9H0K6 701 aaKnown RBP12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
CHMP1B-202ENST00000588284 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 M0R2C6 588 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 ALX1Q15699 326 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 SOGA3Q5TF21 947 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 STRBPQ96SI9 672 aaKnown RBP12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 RTFDC1Q9BY42 306 aaPredicted RBP12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 CYP46A1Q9Y6A2 500 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
CHMP1B-202ENST00000588284 CHGBP05060 677 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 PODNQ7Z5L7 613 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 SLF2Q8IX21 1173 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 NACAP1Q9BZK3 213 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 SUGT1Q9Y2Z0 365 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 FAM205AQ6ZU69 1335 aa12.52□□□□□ -0.41
CHMP1B-202ENST00000588284 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 K7ELQ4 463 aaPredicted RBP12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 APPP05067 770 aa12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 DPEP1P16444 411 aa12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 DZIP1Q86YF9 867 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 CERS3Q8IU89 383 aa12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 NSUN4Q96CB9 384 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 JAKMIP1Q96N16 626 aaKnown RBP12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 PIM2Q9P1W9 311 aa12.51□□□□□ -0.41
CHMP1B-202ENST00000588284 A0A0G2JLW4 131 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 ZNF213O14771 459 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 MBD4O95243 580 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 FGAP02671 866 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 SLC4A3P48751 1232 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 MECOMQ03112 1051 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 CCDC93Q567U6 631 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 RUFY3Q7L099 469 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 NEK1Q96PY6 1258 aa12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 NOL10Q9BSC4 688 aaKnown RBP12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 ALDH8A1Q9H2A2 487 aaPredicted RBP12.5□□□□□ -0.41
CHMP1B-202ENST00000588284 LRRC37AA6NMS7 1700 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 BAG3O95817 575 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 CYP21A2P08686 494 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 KCNA3P22001 575 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 GIMAP6Q6P9H5 292 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 PDRG1Q9NUG6 133 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 MYH7P12883 1935 aa12.49□□□□□ -0.41
CHMP1B-202ENST00000588284 ZMYM6O95789 1325 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 C21orf2O43822 256 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 HSP90AA1P07900 732 aaKnown RBP12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 PPP4CP60510 307 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 FKBP1AP62942 108 aaKnown RBP12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 GTF2IP78347 998 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 TTLL5Q6EMB2 1281 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 OLFM4Q6UX06 510 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 FAM163AQ96GL9 167 aaPredicted RBP12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 ZSCAN31Q96LW9 406 aaPredicted RBP12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 PSMD1Q99460 953 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 UPF3BQ9BZI7 483 aaKnown RBP12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 NAPBQ9H115 298 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 ARMT1Q9H993 441 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
CHMP1B-202ENST00000588284 COL1A1P02452 1464 aaPredicted RBP12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 DOCK2Q92608 1830 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 PLCG2P16885 1265 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 PRDX5P30044 214 aa12.47□□□□□ -0.41
CHMP1B-202ENST00000588284 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms