RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 LAMB1P07942 1786 aa21.13■□□□□ 0.97
LINC01842-201ENST00000588275 UNCXA6NJT0 531 aa21.13■□□□□ 0.97
LINC01842-201ENST00000588275 GRIK5Q16478 980 aa21.13■□□□□ 0.97
LINC01842-201ENST00000588275 CAVIN4Q5BKX8 364 aa21.13■□□□□ 0.97
LINC01842-201ENST00000588275 CDAN1Q8IWY9 1227 aa21.13■□□□□ 0.97
LINC01842-201ENST00000588275 ANKRD44Q8N8A2 993 aa21.13■□□□□ 0.97
LINC01842-201ENST00000588275 ZNF521Q96K83 1311 aa21.12■□□□□ 0.97
LINC01842-201ENST00000588275 TNNI2P48788 182 aa21.12■□□□□ 0.97
LINC01842-201ENST00000588275 RABL6Q3YEC7 729 aaPredicted RBP21.12■□□□□ 0.97
LINC01842-201ENST00000588275 OTUD7BQ6GQQ9 843 aa21.12■□□□□ 0.97
LINC01842-201ENST00000588275 KLHDC4Q8TBB5 520 aa21.12■□□□□ 0.97
LINC01842-201ENST00000588275 OPTNQ96CV9 577 aa21.12■□□□□ 0.97
LINC01842-201ENST00000588275 TMEM39BQ9GZU3 492 aa21.12■□□□□ 0.97
LINC01842-201ENST00000588275 PTPRCP08575 1304 aa21.11■□□□□ 0.97
LINC01842-201ENST00000588275 FBXO33Q7Z6M2 555 aa21.11■□□□□ 0.97
LINC01842-201ENST00000588275 CRHR2Q13324 411 aa21.1■□□□□ 0.97
LINC01842-201ENST00000588275 TBC1D22AQ8WUA7 517 aa21.1■□□□□ 0.97
LINC01842-201ENST00000588275 PDE8BO95263 885 aa21.09■□□□□ 0.97
LINC01842-201ENST00000588275 BCAMP50895 628 aa21.09■□□□□ 0.97
LINC01842-201ENST00000588275 CACNB3P54284 484 aa21.09■□□□□ 0.97
LINC01842-201ENST00000588275 OTOP1Q7RTM1 612 aa21.09■□□□□ 0.97
LINC01842-201ENST00000588275 CD99L2Q8TCZ2 262 aa21.09■□□□□ 0.97
LINC01842-201ENST00000588275 SSH1Q8WYL5 1049 aa21.09■□□□□ 0.97
LINC01842-201ENST00000588275 TEPSINQ96N21 525 aa21.09■□□□□ 0.97
LINC01842-201ENST00000588275 E9PSI1 815 aa21.08■□□□□ 0.97
LINC01842-201ENST00000588275 VGLL2Q8N8G2 317 aa21.08■□□□□ 0.97
LINC01842-201ENST00000588275 CNKSR2Q8WXI2 1034 aa21.08■□□□□ 0.97
LINC01842-201ENST00000588275 TEKT1Q969V4 418 aa21.08■□□□□ 0.97
LINC01842-201ENST00000588275 ERO1AQ96HE7 468 aa21.08■□□□□ 0.97
LINC01842-201ENST00000588275 TMOD2Q9NZR1 351 aa21.08■□□□□ 0.97
LINC01842-201ENST00000588275 VGLL4Q14135 290 aa21.07■□□□□ 0.96
LINC01842-201ENST00000588275 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.07■□□□□ 0.96
LINC01842-201ENST00000588275 PTPN18Q99952 460 aa21.07■□□□□ 0.96
LINC01842-201ENST00000588275 CSADQ9Y600 493 aa21.07■□□□□ 0.96
LINC01842-201ENST00000588275 MYH13Q9UKX3 1938 aa21.07■□□□□ 0.96
LINC01842-201ENST00000588275 IFIT1P09914 478 aaKnown RBP21.06■□□□□ 0.96
LINC01842-201ENST00000588275 MAP3K9P80192 1104 aa21.06■□□□□ 0.96
LINC01842-201ENST00000588275 PUM3Q15397 648 aaKnown RBP21.06■□□□□ 0.96
LINC01842-201ENST00000588275 OTUD5Q96G74 571 aa21.06■□□□□ 0.96
LINC01842-201ENST00000588275 USP44Q9H0E7 712 aa21.06■□□□□ 0.96
LINC01842-201ENST00000588275 CCL15-CCL14A0A0B4J2E2 113 aa21.05■□□□□ 0.96
LINC01842-201ENST00000588275 HDLBPQ00341 1268 aaKnown RBP21.05■□□□□ 0.96
LINC01842-201ENST00000588275 CCL15Q16663 113 aa21.05■□□□□ 0.96
LINC01842-201ENST00000588275 PRPF38BQ5VTL8 546 aaKnown RBP21.05■□□□□ 0.96
LINC01842-201ENST00000588275 TESPA1A2RU30 521 aaPredicted RBP21.04■□□□□ 0.96
LINC01842-201ENST00000588275 SP3Q02447 781 aa21.04■□□□□ 0.96
LINC01842-201ENST00000588275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.04■□□□□ 0.96
LINC01842-201ENST00000588275 EFCC1Q9HA90 598 aa21.04■□□□□ 0.96
LINC01842-201ENST00000588275 SMC4Q9NTJ3 1288 aa21.04■□□□□ 0.96
LINC01842-201ENST00000588275 MAST3O60307 1309 aa21.04■□□□□ 0.96
LINC01842-201ENST00000588275 SLC5A1P13866 664 aa21.03■□□□□ 0.96
LINC01842-201ENST00000588275 GTF2A2P52657 109 aa21.03■□□□□ 0.96
LINC01842-201ENST00000588275 TAF1CQ15572 869 aaPredicted RBP21.03■□□□□ 0.96
LINC01842-201ENST00000588275 BRI3BPQ8WY22 251 aa21.03■□□□□ 0.96
LINC01842-201ENST00000588275 MS4A4AQ96JQ5 239 aa21.03■□□□□ 0.96
LINC01842-201ENST00000588275 PTPN22Q9Y2R2 807 aa21.03■□□□□ 0.96
LINC01842-201ENST00000588275 EYA2O00167 538 aa21.02■□□□□ 0.96
LINC01842-201ENST00000588275 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
LINC01842-201ENST00000588275 ZDHHC15Q96MV8 337 aa21.02■□□□□ 0.96
LINC01842-201ENST00000588275 WRNIP1Q96S55 665 aa21.02■□□□□ 0.96
LINC01842-201ENST00000588275 SIL1Q9H173 461 aa21.02■□□□□ 0.96
LINC01842-201ENST00000588275 FGFR2P21802 821 aa21.01■□□□□ 0.95
LINC01842-201ENST00000588275 ZFYVE28Q9HCC9 887 aa21.01■□□□□ 0.95
LINC01842-201ENST00000588275 HTTP42858 3142 aa21.01■□□□□ 0.95
LINC01842-201ENST00000588275 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
LINC01842-201ENST00000588275 POTEFA5A3E0 1075 aa21■□□□□ 0.95
LINC01842-201ENST00000588275 RFX5P48382 616 aaPredicted RBP21■□□□□ 0.95
LINC01842-201ENST00000588275 ALDH1L2Q3SY69 923 aa21■□□□□ 0.95
LINC01842-201ENST00000588275 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
LINC01842-201ENST00000588275 APOBEC3HQ6NTF7 200 aaKnown RBP21■□□□□ 0.95
LINC01842-201ENST00000588275 FAM43AQ8N2R8 423 aa21■□□□□ 0.95
LINC01842-201ENST00000588275 LPIN2Q92539 896 aa21■□□□□ 0.95
LINC01842-201ENST00000588275 ZKSCAN4Q969J2 545 aaPredicted RBP21■□□□□ 0.95
LINC01842-201ENST00000588275 CDCA7LQ96GN5 454 aa21■□□□□ 0.95
LINC01842-201ENST00000588275 SUGT1Q9Y2Z0 365 aa21■□□□□ 0.95
LINC01842-201ENST00000588275 SNCAIPQ9Y6H5 919 aa21■□□□□ 0.95
LINC01842-201ENST00000588275 SPDYE5A6NIY4 337 aa20.99■□□□□ 0.95
LINC01842-201ENST00000588275 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
LINC01842-201ENST00000588275 FAM83AQ86UY5 434 aa20.99■□□□□ 0.95
LINC01842-201ENST00000588275 WDR66Q8TBY9 1149 aa20.99■□□□□ 0.95
LINC01842-201ENST00000588275 HOOK2Q96ED9 719 aa20.99■□□□□ 0.95
LINC01842-201ENST00000588275 AK9Q5TCS8 1911 aa20.98■□□□□ 0.95
LINC01842-201ENST00000588275 CAP1Q01518 475 aa20.98■□□□□ 0.95
LINC01842-201ENST00000588275 DCAF15Q66K64 600 aa20.98■□□□□ 0.95
LINC01842-201ENST00000588275 HHIPL2Q6UWX4 724 aa20.98■□□□□ 0.95
LINC01842-201ENST00000588275 WDHD1O75717 1129 aaPredicted RBP20.97■□□□□ 0.95
LINC01842-201ENST00000588275 ATP2B3Q16720 1220 aa20.97■□□□□ 0.95
LINC01842-201ENST00000588275 FKBP1CQ5VVH2 108 aa20.97■□□□□ 0.95
LINC01842-201ENST00000588275 MIGA2Q7L4E1 593 aa20.97■□□□□ 0.95
LINC01842-201ENST00000588275 ATG9AQ7Z3C6 839 aa20.97■□□□□ 0.95
LINC01842-201ENST00000588275 ERO1BQ86YB8 467 aa20.97■□□□□ 0.95
LINC01842-201ENST00000588275 MRIQ9BWK5 157 aa20.97■□□□□ 0.95
LINC01842-201ENST00000588275 RPAP1Q9BWH6 1393 aaPredicted RBP20.97■□□□□ 0.95
LINC01842-201ENST00000588275 CETPP11597 493 aa20.96■□□□□ 0.95
LINC01842-201ENST00000588275 TCP10Q12799 353 aa20.96■□□□□ 0.95
LINC01842-201ENST00000588275 ARHGEF6Q15052 776 aa20.96■□□□□ 0.95
LINC01842-201ENST00000588275 DIXDC1Q155Q3 683 aa20.96■□□□□ 0.95
LINC01842-201ENST00000588275 ZNF341Q9BYN7 854 aa20.96■□□□□ 0.95
LINC01842-201ENST00000588275 CENPFP49454 3210 aa20.95■□□□□ 0.94
LINC01842-201ENST00000588275 IRF6O14896 467 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms