RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ZNF521Q96K83 1311 aa17.8■□□□□ 0.44
ERCC1-205ENST00000587888 RABL6Q3YEC7 729 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-205ENST00000587888 TMEM39BQ9GZU3 492 aa17.8■□□□□ 0.44
ERCC1-205ENST00000587888 PDE8BO95263 885 aa17.79■□□□□ 0.44
ERCC1-205ENST00000587888 SLC34A2O95436 690 aa17.79■□□□□ 0.44
ERCC1-205ENST00000587888 BCAMP50895 628 aa17.79■□□□□ 0.44
ERCC1-205ENST00000587888 OTUD7BQ6GQQ9 843 aa17.79■□□□□ 0.44
ERCC1-205ENST00000587888 CDAN1Q8IWY9 1227 aa17.79■□□□□ 0.44
ERCC1-205ENST00000587888 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
ERCC1-205ENST00000587888 TRIM17Q9Y577 477 aa17.79■□□□□ 0.44
ERCC1-205ENST00000587888 TNNI2P48788 182 aa17.78■□□□□ 0.44
ERCC1-205ENST00000587888 OPTNQ96CV9 577 aa17.78■□□□□ 0.44
ERCC1-205ENST00000587888 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
ERCC1-205ENST00000587888 PTPN18Q99952 460 aa17.78■□□□□ 0.44
ERCC1-205ENST00000587888 USP44Q9H0E7 712 aa17.78■□□□□ 0.44
ERCC1-205ENST00000587888 PTPRCP08575 1304 aa17.77■□□□□ 0.44
ERCC1-205ENST00000587888 CACNB3P54284 484 aa17.77■□□□□ 0.44
ERCC1-205ENST00000587888 CRHR2Q13324 411 aa17.77■□□□□ 0.44
ERCC1-205ENST00000587888 TBC1D22AQ8WUA7 517 aa17.77■□□□□ 0.44
ERCC1-205ENST00000587888 E9PSI1 815 aa17.76■□□□□ 0.43
ERCC1-205ENST00000587888 MAP3K9P80192 1104 aa17.76■□□□□ 0.43
ERCC1-205ENST00000587888 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-205ENST00000587888 OTOP1Q7RTM1 612 aa17.76■□□□□ 0.43
ERCC1-205ENST00000587888 VGLL2Q8N8G2 317 aa17.76■□□□□ 0.43
ERCC1-205ENST00000587888 CD99L2Q8TCZ2 262 aa17.76■□□□□ 0.43
ERCC1-205ENST00000587888 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
ERCC1-205ENST00000587888 TEKT1Q969V4 418 aa17.76■□□□□ 0.43
ERCC1-205ENST00000587888 IFIT1P09914 478 aaKnown RBP17.75■□□□□ 0.43
ERCC1-205ENST00000587888 ERO1AQ96HE7 468 aa17.75■□□□□ 0.43
ERCC1-205ENST00000587888 TESPA1A2RU30 521 aaPredicted RBP17.74■□□□□ 0.43
ERCC1-205ENST00000587888 HDLBPQ00341 1268 aaKnown RBP17.74■□□□□ 0.43
ERCC1-205ENST00000587888 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
ERCC1-205ENST00000587888 VGLL4Q14135 290 aa17.74■□□□□ 0.43
ERCC1-205ENST00000587888 MS4A4AQ96JQ5 239 aa17.74■□□□□ 0.43
ERCC1-205ENST00000587888 SP3Q02447 781 aa17.73■□□□□ 0.43
ERCC1-205ENST00000587888 PUM3Q15397 648 aaKnown RBP17.73■□□□□ 0.43
ERCC1-205ENST00000587888 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
ERCC1-205ENST00000587888 CDCA7LQ96GN5 454 aa17.73■□□□□ 0.43
ERCC1-205ENST00000587888 TMOD2Q9NZR1 351 aa17.73■□□□□ 0.43
ERCC1-205ENST00000587888 CSADQ9Y600 493 aa17.73■□□□□ 0.43
ERCC1-205ENST00000587888 TNRC18O15417 2968 aaPredicted RBP17.73■□□□□ 0.43
ERCC1-205ENST00000587888 CCL15-CCL14A0A0B4J2E2 113 aa17.72■□□□□ 0.43
ERCC1-205ENST00000587888 FGFR2P21802 821 aa17.72■□□□□ 0.43
ERCC1-205ENST00000587888 CCL15Q16663 113 aa17.72■□□□□ 0.43
ERCC1-205ENST00000587888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.72■□□□□ 0.43
ERCC1-205ENST00000587888 ZDHHC15Q96MV8 337 aa17.72■□□□□ 0.43
ERCC1-205ENST00000587888 MRIQ9BWK5 157 aa17.72■□□□□ 0.43
ERCC1-205ENST00000587888 EFCC1Q9HA90 598 aa17.72■□□□□ 0.43
ERCC1-205ENST00000587888 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
ERCC1-205ENST00000587888 EYA2O00167 538 aa17.71■□□□□ 0.43
ERCC1-205ENST00000587888 SLC5A1P13866 664 aa17.71■□□□□ 0.43
ERCC1-205ENST00000587888 RFX5P48382 616 aaPredicted RBP17.71■□□□□ 0.43
ERCC1-205ENST00000587888 GTF2A2P52657 109 aa17.71■□□□□ 0.43
ERCC1-205ENST00000587888 APOBEC3HQ6NTF7 200 aaKnown RBP17.71■□□□□ 0.43
ERCC1-205ENST00000587888 BRI3BPQ8WY22 251 aa17.71■□□□□ 0.43
ERCC1-205ENST00000587888 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
ERCC1-205ENST00000587888 ARAP2Q8WZ64 1704 aa17.7■□□□□ 0.42
ERCC1-205ENST00000587888 OTOFQ9HC10 1997 aa17.7■□□□□ 0.42
ERCC1-205ENST00000587888 TAF1CQ15572 869 aaPredicted RBP17.7■□□□□ 0.42
ERCC1-205ENST00000587888 PRPF38BQ5VTL8 546 aaKnown RBP17.7■□□□□ 0.42
ERCC1-205ENST00000587888 ZKSCAN4Q969J2 545 aaPredicted RBP17.7■□□□□ 0.42
ERCC1-205ENST00000587888 SIL1Q9H173 461 aa17.7■□□□□ 0.42
ERCC1-205ENST00000587888 ZFYVE28Q9HCC9 887 aa17.7■□□□□ 0.42
ERCC1-205ENST00000587888 MAST3O60307 1309 aa17.7■□□□□ 0.42
ERCC1-205ENST00000587888 POTEFA5A3E0 1075 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 CAP1Q01518 475 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
ERCC1-205ENST00000587888 HHIPL2Q6UWX4 724 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 MIGA2Q7L4E1 593 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 FAM43AQ8N2R8 423 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 WDR66Q8TBY9 1149 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 LPIN2Q92539 896 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 WRNIP1Q96S55 665 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 SUGT1Q9Y2Z0 365 aa17.69■□□□□ 0.42
ERCC1-205ENST00000587888 LAMB1P07942 1786 aa17.68■□□□□ 0.42
ERCC1-205ENST00000587888 UBTFL1P0CB47 393 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-205ENST00000587888 FAM83AQ86UY5 434 aa17.68■□□□□ 0.42
ERCC1-205ENST00000587888 NOB1Q9ULX3 412 aaKnown RBP17.68■□□□□ 0.42
ERCC1-205ENST00000587888 SNCAIPQ9Y6H5 919 aa17.68■□□□□ 0.42
ERCC1-205ENST00000587888 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
ERCC1-205ENST00000587888 SPDYE5A6NIY4 337 aa17.67■□□□□ 0.42
ERCC1-205ENST00000587888 TCP10Q12799 353 aa17.67■□□□□ 0.42
ERCC1-205ENST00000587888 FKBP1CQ5VVH2 108 aa17.67■□□□□ 0.42
ERCC1-205ENST00000587888 ERO1BQ86YB8 467 aa17.67■□□□□ 0.42
ERCC1-205ENST00000587888 HOOK2Q96ED9 719 aa17.67■□□□□ 0.42
ERCC1-205ENST00000587888 CEP126Q9P2H0 1117 aa17.67■□□□□ 0.42
ERCC1-205ENST00000587888 CETPP11597 493 aa17.66■□□□□ 0.42
ERCC1-205ENST00000587888 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
ERCC1-205ENST00000587888 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
ERCC1-205ENST00000587888 IRF6O14896 467 aa17.65■□□□□ 0.42
ERCC1-205ENST00000587888 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-205ENST00000587888 SNAPC2Q13487 334 aa17.65■□□□□ 0.42
ERCC1-205ENST00000587888 ARHGEF6Q15052 776 aa17.65■□□□□ 0.42
ERCC1-205ENST00000587888 DIXDC1Q155Q3 683 aa17.65■□□□□ 0.42
ERCC1-205ENST00000587888 ZNF341Q9BYN7 854 aa17.65■□□□□ 0.42
ERCC1-205ENST00000587888 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
ERCC1-205ENST00000587888 DAGLAQ9Y4D2 1042 aa17.65■□□□□ 0.42
ERCC1-205ENST00000587888 BTBD19C9JJ37 291 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms