RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 TEPSINQ96N21 525 aa19.74■□□□□ 0.75
NCLN-203ENST00000587740 PTPRCP08575 1304 aa19.74■□□□□ 0.75
NCLN-203ENST00000587740 RBM5P52756 815 aaKnown RBP eCLIP19.73■□□□□ 0.75
NCLN-203ENST00000587740 IFIT5Q13325 482 aaKnown RBP19.73■□□□□ 0.75
NCLN-203ENST00000587740 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.73■□□□□ 0.75
NCLN-203ENST00000587740 ZNF333Q96JL9 665 aa19.73■□□□□ 0.75
NCLN-203ENST00000587740 ZNF70Q9UC06 446 aaPredicted RBP19.73■□□□□ 0.75
NCLN-203ENST00000587740 F6X3S4 739 aa19.72■□□□□ 0.75
NCLN-203ENST00000587740 SPDYE2Q495Y8 402 aa19.72■□□□□ 0.75
NCLN-203ENST00000587740 EPHA10Q5JZY3 1008 aa19.72■□□□□ 0.75
NCLN-203ENST00000587740 BRI3BPQ8WY22 251 aa19.72■□□□□ 0.75
NCLN-203ENST00000587740 ZNF594Q96JF6 807 aaPredicted RBP19.72■□□□□ 0.75
NCLN-203ENST00000587740 TDRD3Q9H7E2 651 aaKnown RBP19.72■□□□□ 0.75
NCLN-203ENST00000587740 FAM205AQ6ZU69 1335 aa19.72■□□□□ 0.75
NCLN-203ENST00000587740 PLIN1O60240 522 aa19.71■□□□□ 0.75
NCLN-203ENST00000587740 CHMP3Q9Y3E7 222 aa19.71■□□□□ 0.75
NCLN-203ENST00000587740 PTCH2Q9Y6C5 1203 aa19.71■□□□□ 0.75
NCLN-203ENST00000587740 TRIOBPQ9H2D6 2365 aa19.71■□□□□ 0.75
NCLN-203ENST00000587740 LMBR1LQ6UX01 489 aa19.7■□□□□ 0.74
NCLN-203ENST00000587740 TDRD7Q8NHU6 1098 aaKnown RBP19.7■□□□□ 0.74
NCLN-203ENST00000587740 MFSD14BQ5SR56 506 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 BEND3Q5T5X7 828 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 SLC4A10Q6U841 1118 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 FAM43AQ8N2R8 423 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 TMEM106CQ9BVX2 250 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 TMEM39BQ9GZU3 492 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 SERPINA10Q9UK55 444 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 NOB1Q9ULX3 412 aaKnown RBP19.69■□□□□ 0.74
NCLN-203ENST00000587740 TTF2Q9UNY4 1162 aaKnown RBP19.69■□□□□ 0.74
NCLN-203ENST00000587740 COLQQ9Y215 455 aaPredicted RBP19.69■□□□□ 0.74
NCLN-203ENST00000587740 KIF16BQ96L93 1317 aa19.69■□□□□ 0.74
NCLN-203ENST00000587740 CCL15-CCL14A0A0B4J2E2 113 aa19.68■□□□□ 0.74
NCLN-203ENST00000587740 TNFAIP1Q13829 316 aa19.68■□□□□ 0.74
NCLN-203ENST00000587740 VGLL4Q14135 290 aa19.68■□□□□ 0.74
NCLN-203ENST00000587740 TAF1CQ15572 869 aaPredicted RBP19.68■□□□□ 0.74
NCLN-203ENST00000587740 GRIK5Q16478 980 aa19.68■□□□□ 0.74
NCLN-203ENST00000587740 CCL15Q16663 113 aa19.68■□□□□ 0.74
NCLN-203ENST00000587740 LDHAL6AQ6ZMR3 332 aa19.68■□□□□ 0.74
NCLN-203ENST00000587740 DZIP1LQ8IYY4 767 aaKnown RBP19.68■□□□□ 0.74
NCLN-203ENST00000587740 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.68■□□□□ 0.749e-9■■□□□ 14.2
NCLN-203ENST00000587740 ZSWIM8A7E2V4 1837 aa19.67■□□□□ 0.74
NCLN-203ENST00000587740 TCP10L2B9ZVM9 353 aa19.67■□□□□ 0.74
NCLN-203ENST00000587740 BCAR3O75815 825 aa19.67■□□□□ 0.74
NCLN-203ENST00000587740 GYG1P46976 350 aa19.67■□□□□ 0.74
NCLN-203ENST00000587740 MAP3K9P80192 1104 aa19.67■□□□□ 0.74
NCLN-203ENST00000587740 SLC9C1Q4G0N8 1177 aa19.67■□□□□ 0.74
NCLN-203ENST00000587740 ZFYVE28Q9HCC9 887 aa19.67■□□□□ 0.74
NCLN-203ENST00000587740 SZT2Q5T011 3432 aa19.66■□□□□ 0.74
NCLN-203ENST00000587740 IPO8O15397 1037 aaKnown RBP19.66■□□□□ 0.74
NCLN-203ENST00000587740 GTF2A2P52657 109 aa19.66■□□□□ 0.74
NCLN-203ENST00000587740 CCDC57Q2TAC2 916 aa19.66■□□□□ 0.74
NCLN-203ENST00000587740 FAM84BQ96KN1 310 aaPredicted RBP19.66■□□□□ 0.74
NCLN-203ENST00000587740 API5Q9BZZ5 524 aaKnown RBP19.66■□□□□ 0.74
NCLN-203ENST00000587740 ARHGAP39Q9C0H5 1083 aa19.66■□□□□ 0.74
NCLN-203ENST00000587740 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
NCLN-203ENST00000587740 MYCP01106 439 aaPredicted RBP19.65■□□□□ 0.74
NCLN-203ENST00000587740 CRKP46108 304 aa19.65■□□□□ 0.74
NCLN-203ENST00000587740 UBE4AQ14139 1066 aa19.65■□□□□ 0.74
NCLN-203ENST00000587740 ARHGAP45Q92619 1136 aa19.65■□□□□ 0.74
NCLN-203ENST00000587740 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
NCLN-203ENST00000587740 OTUD5Q96G74 571 aa19.65■□□□□ 0.74
NCLN-203ENST00000587740 PUS3Q9BZE2 481 aaKnown RBP19.65■□□□□ 0.74
NCLN-203ENST00000587740 SRCIN1Q9C0H9 1055 aa19.65■□□□□ 0.74
NCLN-203ENST00000587740 CNNM1Q9NRU3 951 aa19.65■□□□□ 0.74
NCLN-203ENST00000587740 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
NCLN-203ENST00000587740 HIBADHP31937 336 aaKnown RBP19.64■□□□□ 0.73
NCLN-203ENST00000587740 SLC4A8Q2Y0W8 1093 aa19.64■□□□□ 0.73
NCLN-203ENST00000587740 TAF7LQ5H9L4 462 aa19.64■□□□□ 0.73
NCLN-203ENST00000587740 NBPF11Q86T75 865 aa19.64■□□□□ 0.73
NCLN-203ENST00000587740 SH3TC2Q8TF17 1288 aa19.63■□□□□ 0.73
NCLN-203ENST00000587740 SNCAIPQ9Y6H5 919 aa19.63■□□□□ 0.73
NCLN-203ENST00000587740 SPDYE5A6NIY4 337 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 BTBD19C9JJ37 291 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 H0YGN5 161 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 GRM8O00222 908 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 TLR2O60603 784 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 CACNB3P54284 484 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 ARHGEF6Q15052 776 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 CSADQ9Y600 493 aa19.62■□□□□ 0.73
NCLN-203ENST00000587740 RANBP2P49792 3224 aaKnown RBP19.61■□□□□ 0.73
NCLN-203ENST00000587740 TNNI2P48788 182 aa19.61■□□□□ 0.73
NCLN-203ENST00000587740 ATF7IPQ6VMQ6 1270 aa19.61■□□□□ 0.73
NCLN-203ENST00000587740 KAZALD1Q96I82 304 aa19.61■□□□□ 0.73
NCLN-203ENST00000587740 C9orf78Q9NZ63 289 aaPredicted RBP19.61■□□□□ 0.73
NCLN-203ENST00000587740 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
NCLN-203ENST00000587740 IQSEC3Q9UPP2 1182 aaPredicted RBP19.61■□□□□ 0.73
NCLN-203ENST00000587740 LACTBP83111 547 aaPredicted RBP19.6■□□□□ 0.73
NCLN-203ENST00000587740 ZKSCAN2Q63HK3 967 aa19.6■□□□□ 0.73
NCLN-203ENST00000587740 FBXO33Q7Z6M2 555 aa19.6■□□□□ 0.73
NCLN-203ENST00000587740 ZKSCAN4Q969J2 545 aaPredicted RBP19.6■□□□□ 0.73
NCLN-203ENST00000587740 RIPOR2Q9Y4F9 1068 aa19.6■□□□□ 0.73
NCLN-203ENST00000587740 IRF6O14896 467 aa19.59■□□□□ 0.73
NCLN-203ENST00000587740 CETPP11597 493 aa19.59■□□□□ 0.73
NCLN-203ENST00000587740 CTGFP29279 349 aa19.59■□□□□ 0.73
NCLN-203ENST00000587740 ERO1BQ86YB8 467 aa19.59■□□□□ 0.73
NCLN-203ENST00000587740 HDLBPQ00341 1268 aaKnown RBP19.58■□□□□ 0.72
NCLN-203ENST00000587740 CHAF1AQ13111 956 aaPredicted RBP19.58■□□□□ 0.72
NCLN-203ENST00000587740 MTFR1Q15390 333 aa19.58■□□□□ 0.72
NCLN-203ENST00000587740 SHISA4Q96DD7 197 aa19.58■□□□□ 0.72
NCLN-203ENST00000587740 SUCLG2Q96I99 432 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms