RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 BECN2A8MW95 431 aa23.1■■□□□ 1.29
MBD1-216ENST00000587605 ARID4AP29374 1257 aaPredicted RBP23.1■■□□□ 1.29
MBD1-216ENST00000587605 GREM2Q9H772 168 aa23.1■■□□□ 1.29
MBD1-216ENST00000587605 PLCH1Q4KWH8 1693 aa23.09■■□□□ 1.29
MBD1-216ENST00000587605 IRS4O14654 1257 aaPredicted RBP23.09■■□□□ 1.29
MBD1-216ENST00000587605 CYP19A1P11511 503 aaPredicted RBP23.09■■□□□ 1.29
MBD1-216ENST00000587605 SF3A1Q15459 793 aaKnown RBP23.09■■□□□ 1.29
MBD1-216ENST00000587605 CPLX2Q6PUV4 134 aaKnown RBP23.09■■□□□ 1.29
MBD1-216ENST00000587605 CCDC85AQ96PX6 553 aaPredicted RBP23.09■■□□□ 1.29
MBD1-216ENST00000587605 ANGEL1Q9UNK9 670 aaKnown RBP23.09■■□□□ 1.29
MBD1-216ENST00000587605 PDE8BO95263 885 aa23.08■■□□□ 1.29
MBD1-216ENST00000587605 C11orf57Q6ZUT1 292 aaPredicted RBP23.08■■□□□ 1.29
MBD1-216ENST00000587605 STRCQ7RTU9 1775 aa23.08■■□□□ 1.29
MBD1-216ENST00000587605 MROH5Q6ZUA9 1318 aa23.08■■□□□ 1.28
MBD1-216ENST00000587605 ALX1Q15699 326 aa23.08■■□□□ 1.28
MBD1-216ENST00000587605 HLFQ16534 295 aa23.08■■□□□ 1.28
MBD1-216ENST00000587605 SLC9C2Q5TAH2 1124 aa23.08■■□□□ 1.28
MBD1-216ENST00000587605 MYSM1Q5VVJ2 828 aa23.08■■□□□ 1.28
MBD1-216ENST00000587605 SYNE3Q6ZMZ3 975 aa23.08■■□□□ 1.28
MBD1-216ENST00000587605 GPHNQ9NQX3 736 aaPredicted RBP23.08■■□□□ 1.28
MBD1-216ENST00000587605 NUP98P52948 1817 aa23.07■■□□□ 1.28
MBD1-216ENST00000587605 COL14A1Q05707 1796 aaKnown RBP23.07■■□□□ 1.28
MBD1-216ENST00000587605 TMEM87BQ96K49 555 aa23.07■■□□□ 1.28
MBD1-216ENST00000587605 BPIFA3Q9BQP9 254 aa23.07■■□□□ 1.28
MBD1-216ENST00000587605 SPTLC2O15270 562 aa23.06■■□□□ 1.28
MBD1-216ENST00000587605 PUM3Q15397 648 aaKnown RBP23.06■■□□□ 1.28
MBD1-216ENST00000587605 LPIN2Q92539 896 aa23.06■■□□□ 1.28
MBD1-216ENST00000587605 TRMT112Q9UI30 125 aaKnown RBP23.06■■□□□ 1.28
MBD1-216ENST00000587605 GPTP24298 496 aa23.06■■□□□ 1.28
MBD1-216ENST00000587605 IL6STP40189 918 aaPredicted RBP23.06■■□□□ 1.28
MBD1-216ENST00000587605 ZRSR1Q15695 479 aaKnown RBP23.06■■□□□ 1.28
MBD1-216ENST00000587605 SDF4Q9BRK5 362 aa23.06■■□□□ 1.28
MBD1-216ENST00000587605 SH2B2O14492 632 aaPredicted RBP23.05■■□□□ 1.28
MBD1-216ENST00000587605 KIF23Q02241 960 aaPredicted RBP23.05■■□□□ 1.28
MBD1-216ENST00000587605 PI16Q6UXB8 463 aa23.05■■□□□ 1.28
MBD1-216ENST00000587605 PDE6AP16499 860 aa23.04■■□□□ 1.28
MBD1-216ENST00000587605 DHX8Q14562 1220 aaKnown RBP23.04■■□□□ 1.28
MBD1-216ENST00000587605 DHX40Q8IX18 779 aaKnown RBP23.04■■□□□ 1.28
MBD1-216ENST00000587605 ANO1Q5XXA6 986 aa23.04■■□□□ 1.28
MBD1-216ENST00000587605 CCDC102BQ68D86 513 aa23.04■■□□□ 1.28
MBD1-216ENST00000587605 PIH1D3Q9NQM4 214 aaKnown RBP23.04■■□□□ 1.28
MBD1-216ENST00000587605 CLIC4Q9Y696 253 aa23.04■■□□□ 1.28
MBD1-216ENST00000587605 CMA1P23946 247 aa23.03■■□□□ 1.28
MBD1-216ENST00000587605 METAP2P50579 478 aaKnown RBP eCLIP23.03■■□□□ 1.28
MBD1-216ENST00000587605 JMYQ8N9B5 988 aa23.03■■□□□ 1.28
MBD1-216ENST00000587605 NBPF3Q9H094 633 aa23.03■■□□□ 1.28
MBD1-216ENST00000587605 KIAA1468Q9P260 1216 aa23.03■■□□□ 1.28
MBD1-216ENST00000587605 NRBP1Q9UHY1 535 aa23.03■■□□□ 1.28
MBD1-216ENST00000587605 ZNF532Q9HCE3 1301 aa23.03■■□□□ 1.28
MBD1-216ENST00000587605 IDH1O75874 414 aaKnown RBP23.02■■□□□ 1.28
MBD1-216ENST00000587605 FGFR2P21802 821 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 ZNF34Q8IZ26 560 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 SYNE4Q8N205 404 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 TIGD1Q96MW7 591 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 DOCK2Q92608 1830 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 TCRBV5S4A2TA0A5A2 114 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 SLC5A1P13866 664 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 NDUFA8P51970 172 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 RBM6P78332 1123 aaKnown RBP23.02■■□□□ 1.28
MBD1-216ENST00000587605 SGMS1Q86VZ5 419 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 TBC1D10CQ8IV04 446 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 BTG4Q9NY30 223 aa23.02■■□□□ 1.28
MBD1-216ENST00000587605 POLR3DP05423 398 aaPredicted RBP23.01■■□□□ 1.27
MBD1-216ENST00000587605 GSDMDP57764 484 aa23.01■■□□□ 1.27
MBD1-216ENST00000587605 TPM4P67936 248 aa23.01■■□□□ 1.27
MBD1-216ENST00000587605 LRMPQ12912 555 aa23.01■■□□□ 1.27
MBD1-216ENST00000587605 DZIP3Q86Y13 1208 aaKnown RBP23.01■■□□□ 1.27
MBD1-216ENST00000587605 AIDAQ96BJ3 306 aa23.01■■□□□ 1.27
MBD1-216ENST00000587605 ZBTB1Q9Y2K1 713 aa23.01■■□□□ 1.27
MBD1-216ENST00000587605 TIAM2Q8IVF5 1701 aa23■■□□□ 1.27
MBD1-216ENST00000587605 A0A1B0GVL5 298 aa23■■□□□ 1.27
MBD1-216ENST00000587605 APPP05067 770 aa23■■□□□ 1.27
MBD1-216ENST00000587605 SLC39A14Q15043 492 aa23■■□□□ 1.27
MBD1-216ENST00000587605 OTUD7BQ6GQQ9 843 aa23■■□□□ 1.27
MBD1-216ENST00000587605 LRRC8AQ8IWT6 810 aa23■■□□□ 1.27
MBD1-216ENST00000587605 CACTINQ8WUQ7 758 aaKnown RBP23■■□□□ 1.27
MBD1-216ENST00000587605 STRBPQ96SI9 672 aaKnown RBP23■■□□□ 1.27
MBD1-216ENST00000587605 ALG1Q9BT22 464 aa23■■□□□ 1.27
MBD1-216ENST00000587605 CNNM2Q9H8M5 875 aa23■■□□□ 1.27
MBD1-216ENST00000587605 STK36Q9NRP7 1315 aa23■■□□□ 1.27
MBD1-216ENST00000587605 PPP6R2O75170 966 aa23■■□□□ 1.27
MBD1-216ENST00000587605 PRKCSHP14314 528 aaPredicted RBP23■■□□□ 1.27
MBD1-216ENST00000587605 PHKA1P46020 1223 aa23■■□□□ 1.27
MBD1-216ENST00000587605 MAP3K12Q12852 859 aa23■■□□□ 1.27
MBD1-216ENST00000587605 APOA5Q6Q788 366 aa23■■□□□ 1.27
MBD1-216ENST00000587605 IMPACTQ9P2X3 320 aa23■■□□□ 1.27
MBD1-216ENST00000587605 PAXBP1Q9Y5B6 917 aa23■■□□□ 1.27
MBD1-216ENST00000587605 WNK3Q9BYP7 1800 aa22.99■■□□□ 1.27
MBD1-216ENST00000587605 PATL2C9JE40 543 aaKnown RBP22.99■■□□□ 1.27
MBD1-216ENST00000587605 PPFIA3O75145 1194 aa22.99■■□□□ 1.27
MBD1-216ENST00000587605 SLC3A2P08195 630 aaKnown RBP22.99■■□□□ 1.27
MBD1-216ENST00000587605 LIFRP42702 1097 aa22.99■■□□□ 1.27
MBD1-216ENST00000587605 CYB5R4Q7L1T6 521 aa22.99■■□□□ 1.27
MBD1-216ENST00000587605 SLC4A9Q96Q91 983 aa22.99■■□□□ 1.27
MBD1-216ENST00000587605 ZNF335Q9H4Z2 1342 aaPredicted RBP22.99■■□□□ 1.27
MBD1-216ENST00000587605 NID2Q14112 1375 aa22.99■■□□□ 1.27
MBD1-216ENST00000587605 SMTNL1A8MU46 457 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 ZBTB43O43298 467 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 CCDC144BQ3MJ40 725 aa22.98■■□□□ 1.27
MBD1-216ENST00000587605 AXDND1Q5T1B0 1012 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms