RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 C15orf52Q6ZUT6 534 aaKnown RBP10.93□□□□□ -0.66
SDF2-204ENST00000587338 MIER1Q8N108 512 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 TSPYL6Q8N831 410 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 SHISA4Q96DD7 197 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 PLA2G12BQ9BX93 195 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 TDRD3Q9H7E2 651 aaKnown RBP10.93□□□□□ -0.66
SDF2-204ENST00000587338 TCP10L2B9ZVM9 353 aa10.92□□□□□ -0.66
SDF2-204ENST00000587338 TLR2O60603 784 aa10.92□□□□□ -0.66
SDF2-204ENST00000587338 CSF1RP07333 972 aa10.92□□□□□ -0.66
SDF2-204ENST00000587338 MTFR1Q15390 333 aa10.92□□□□□ -0.66
SDF2-204ENST00000587338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.92□□□□□ -0.66
SDF2-204ENST00000587338 TEPSINQ96N21 525 aa10.92□□□□□ -0.66
SDF2-204ENST00000587338 TMEM39BQ9GZU3 492 aa10.92□□□□□ -0.66
SDF2-204ENST00000587338 TTF2Q9UNY4 1162 aaKnown RBP10.92□□□□□ -0.66
SDF2-204ENST00000587338 CHMP3Q9Y3E7 222 aa10.92□□□□□ -0.66
SDF2-204ENST00000587338 SPDYE5A6NIY4 337 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 BTBD19C9JJ37 291 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 APAF1O14727 1248 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 PLIN1O60240 522 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 CETPP11597 493 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 CASP7P55210 303 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 MFSD14BQ5SR56 506 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 HTATIP2Q9BUP3 242 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
SDF2-204ENST00000587338 GNRH1P01148 92 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 TNNI2P48788 182 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 PRMT2P55345 433 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.66
SDF2-204ENST00000587338 G2E3Q7L622 706 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 DZIP1LQ8IYY4 767 aaKnown RBP10.9□□□□□ -0.66
SDF2-204ENST00000587338 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 RAET1EQ8TD07 263 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
SDF2-204ENST00000587338 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 SNCAIPQ9Y6H5 919 aa10.9□□□□□ -0.66
SDF2-204ENST00000587338 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 IRF6O14896 467 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 GRK4P32298 578 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 PSMC4P43686 418 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 CACNB3P54284 484 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 TAF7LQ5H9L4 462 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 WRNIP1Q96S55 665 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 ZCCHC17Q9NP64 241 aaKnown RBP10.89□□□□□ -0.67
SDF2-204ENST00000587338 BIN2Q9UBW5 565 aaPredicted RBP10.89□□□□□ -0.67
SDF2-204ENST00000587338 CPA4Q9UI42 421 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 NR2E3Q9Y5X4 410 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 A0A1B0GUL6 1792 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
SDF2-204ENST00000587338 FMNL1O95466 1100 aaPredicted RBP10.88□□□□□ -0.67
SDF2-204ENST00000587338 CCL5P13501 91 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 OSBPP22059 807 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 CTGFP29279 349 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 CRKP46108 304 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 GJA8P48165 433 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 FLIIQ13045 1269 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 FKBP5Q13451 457 aaPredicted RBP10.88□□□□□ -0.67
SDF2-204ENST00000587338 ERO1BQ86YB8 467 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 DNAAF4Q8WXU2 420 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 ZKSCAN4Q969J2 545 aaPredicted RBP10.88□□□□□ -0.67
SDF2-204ENST00000587338 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 RNF208Q9H0X6 261 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 PRO3102Q9H379 93 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 SRRDQ9UH36 339 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 RIPOR2Q9Y4F9 1068 aa10.88□□□□□ -0.67
SDF2-204ENST00000587338 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
SDF2-204ENST00000587338 FARP2O94887 1054 aaPredicted RBP10.87□□□□□ -0.67
SDF2-204ENST00000587338 GJB1P08034 283 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 HOXD10P28358 340 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 GYG1P46976 350 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 PPIL2Q13356 520 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 LDHAL6AQ6ZMR3 332 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 UBE2Q1Q7Z7E8 422 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 ZNF594Q96JF6 807 aaPredicted RBP10.87□□□□□ -0.67
SDF2-204ENST00000587338 CNNM1Q9NRU3 951 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 UNC80Q8N2C7 3258 aa10.87□□□□□ -0.67
SDF2-204ENST00000587338 MYPNQ86TC9 1320 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 PDHXO00330 501 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 SOX1O00570 391 aaPredicted RBP10.86□□□□□ -0.67
SDF2-204ENST00000587338 HIBADHP31937 336 aaKnown RBP10.86□□□□□ -0.67
SDF2-204ENST00000587338 UBXN2AP68543 259 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 FOXO4P98177 505 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 CCDC57Q2TAC2 916 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 TWISTNBQ3B726 338 aaPredicted RBP10.86□□□□□ -0.67
SDF2-204ENST00000587338 LMBR1LQ6UX01 489 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 C17orf99Q6UX52 265 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.86□□□□□ -0.67
SDF2-204ENST00000587338 TDRD7Q8NHU6 1098 aaKnown RBP10.86□□□□□ -0.67
SDF2-204ENST00000587338 LRCH3Q96II8 777 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 TMOD2Q9NZR1 351 aa10.86□□□□□ -0.67
SDF2-204ENST00000587338 EVI5O60447 810 aa10.85□□□□□ -0.67
SDF2-204ENST00000587338 CHAF1AQ13111 956 aaPredicted RBP10.85□□□□□ -0.67
SDF2-204ENST00000587338 GRIK5Q16478 980 aa10.85□□□□□ -0.67
SDF2-204ENST00000587338 U2AF1L4Q8WU68 220 aaKnown RBP10.85□□□□□ -0.67
SDF2-204ENST00000587338 HOOK2Q96ED9 719 aa10.85□□□□□ -0.67
SDF2-204ENST00000587338 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
SDF2-204ENST00000587338 A0A1W2PPC1 479 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms