RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 FAM43AQ8N2R8 423 aa18.65■□□□□ 0.58
LRFN3-203ENST00000587257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.65■□□□□ 0.58
LRFN3-203ENST00000587257 TCP10L2B9ZVM9 353 aa18.64■□□□□ 0.57
LRFN3-203ENST00000587257 PLIN1O60240 522 aa18.64■□□□□ 0.57
LRFN3-203ENST00000587257 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
LRFN3-203ENST00000587257 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.57
LRFN3-203ENST00000587257 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
LRFN3-203ENST00000587257 TMEM39BQ9GZU3 492 aa18.64■□□□□ 0.57
LRFN3-203ENST00000587257 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
LRFN3-203ENST00000587257 OTOFQ9HC10 1997 aa18.64■□□□□ 0.57
LRFN3-203ENST00000587257 SPDYE5A6NIY4 337 aa18.63■□□□□ 0.57
LRFN3-203ENST00000587257 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
LRFN3-203ENST00000587257 SH3TC2Q8TF17 1288 aa18.63■□□□□ 0.57
LRFN3-203ENST00000587257 ZCCHC17Q9NP64 241 aaKnown RBP18.63■□□□□ 0.57
LRFN3-203ENST00000587257 TLR2O60603 784 aa18.62■□□□□ 0.57
LRFN3-203ENST00000587257 GNRH1P01148 92 aa18.62■□□□□ 0.57
LRFN3-203ENST00000587257 CETPP11597 493 aa18.62■□□□□ 0.57
LRFN3-203ENST00000587257 CRKP46108 304 aa18.62■□□□□ 0.57
LRFN3-203ENST00000587257 LACTBP83111 547 aaPredicted RBP18.62■□□□□ 0.57
LRFN3-203ENST00000587257 LMBR1LQ6UX01 489 aa18.62■□□□□ 0.57
LRFN3-203ENST00000587257 HIBADHP31937 336 aaKnown RBP18.61■□□□□ 0.57
LRFN3-203ENST00000587257 GYG1P46976 350 aa18.61■□□□□ 0.57
LRFN3-203ENST00000587257 PRMT2P55345 433 aa18.61■□□□□ 0.57
LRFN3-203ENST00000587257 CCDC27Q2M243 656 aa18.61■□□□□ 0.57
LRFN3-203ENST00000587257 ZNF594Q96JF6 807 aaPredicted RBP18.61■□□□□ 0.57
LRFN3-203ENST00000587257 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
LRFN3-203ENST00000587257 IL16Q14005 1332 aa18.6■□□□□ 0.57
LRFN3-203ENST00000587257 SNAPC2Q13487 334 aa18.6■□□□□ 0.57
LRFN3-203ENST00000587257 UBE4AQ14139 1066 aa18.6■□□□□ 0.57
LRFN3-203ENST00000587257 ERO1BQ86YB8 467 aa18.6■□□□□ 0.57
LRFN3-203ENST00000587257 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
LRFN3-203ENST00000587257 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
LRFN3-203ENST00000587257 A0A1B0GUL6 1792 aa18.6■□□□□ 0.57
LRFN3-203ENST00000587257 BEND3Q5T5X7 828 aa18.59■□□□□ 0.57
LRFN3-203ENST00000587257 CHRDL2Q6WN34 429 aa18.59■□□□□ 0.57
LRFN3-203ENST00000587257 WRNIP1Q96S55 665 aa18.59■□□□□ 0.57
LRFN3-203ENST00000587257 BTBD19C9JJ37 291 aa18.58■□□□□ 0.56
LRFN3-203ENST00000587257 GRM8O00222 908 aa18.58■□□□□ 0.56
LRFN3-203ENST00000587257 EPHA10Q5JZY3 1008 aa18.58■□□□□ 0.56
LRFN3-203ENST00000587257 HOOK2Q96ED9 719 aa18.58■□□□□ 0.56
LRFN3-203ENST00000587257 FAM84BQ96KN1 310 aaPredicted RBP18.58■□□□□ 0.56
LRFN3-203ENST00000587257 TMOD2Q9NZR1 351 aa18.58■□□□□ 0.56
LRFN3-203ENST00000587257 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
LRFN3-203ENST00000587257 F6X3S4 739 aa18.57■□□□□ 0.56
LRFN3-203ENST00000587257 HDLBPQ00341 1268 aaKnown RBP18.57■□□□□ 0.56
LRFN3-203ENST00000587257 PPIL2Q13356 520 aa18.57■□□□□ 0.56
LRFN3-203ENST00000587257 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
LRFN3-203ENST00000587257 ARAP2Q8WZ64 1704 aa18.57■□□□□ 0.56
LRFN3-203ENST00000587257 IRF6O14896 467 aa18.56■□□□□ 0.56
LRFN3-203ENST00000587257 CACNB3P54284 484 aa18.56■□□□□ 0.56
LRFN3-203ENST00000587257 NKX2-3Q8TAU0 364 aa18.56■□□□□ 0.56
LRFN3-203ENST00000587257 TBC1D22AQ8WUA7 517 aa18.56■□□□□ 0.56
LRFN3-203ENST00000587257 DPF3Q92784 378 aa18.56■□□□□ 0.56
LRFN3-203ENST00000587257 ZKSCAN4Q969J2 545 aaPredicted RBP18.56■□□□□ 0.56
LRFN3-203ENST00000587257 TEKT1Q969V4 418 aa18.56■□□□□ 0.56
LRFN3-203ENST00000587257 SHISA4Q96DD7 197 aa18.56■□□□□ 0.56
LRFN3-203ENST00000587257 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
LRFN3-203ENST00000587257 C9orf78Q9NZ63 289 aaPredicted RBP18.55■□□□□ 0.56
LRFN3-203ENST00000587257 FRAT2O75474 233 aaPredicted RBP18.54■□□□□ 0.56
LRFN3-203ENST00000587257 ECM2O94769 699 aaPredicted RBP18.54■□□□□ 0.56
LRFN3-203ENST00000587257 HOXD10P28358 340 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 MTFR1Q15390 333 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 GRIK5Q16478 980 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 DCAF15Q66K64 600 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 C17orf99Q6UX52 265 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 FAM83AQ86UY5 434 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 RAET1EQ8TD07 263 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 RBM27Q9P2N5 1060 aaKnown RBP18.54■□□□□ 0.56
LRFN3-203ENST00000587257 SRRDQ9UH36 339 aa18.54■□□□□ 0.56
LRFN3-203ENST00000587257 MROH5Q6ZUA9 1318 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 VAMP4O75379 141 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 PSMC4P43686 418 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 PPATQ06203 517 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 FKBP1CQ5VVH2 108 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 TRIM47Q96LD4 638 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 ZDHHC15Q96MV8 337 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 HTATIP2Q9BUP3 242 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 CPA4Q9UI42 421 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 IQSEC3Q9UPP2 1182 aaPredicted RBP18.53■□□□□ 0.56
LRFN3-203ENST00000587257 RPAP1Q9BWH6 1393 aaPredicted RBP18.53■□□□□ 0.56
LRFN3-203ENST00000587257 TRIOBPQ9H2D6 2365 aa18.53■□□□□ 0.56
LRFN3-203ENST00000587257 MAST3O60307 1309 aa18.52■□□□□ 0.56
LRFN3-203ENST00000587257 GRK4P32298 578 aa18.52■□□□□ 0.56
LRFN3-203ENST00000587257 CAVIN4Q5BKX8 364 aa18.52■□□□□ 0.56
LRFN3-203ENST00000587257 FBXO33Q7Z6M2 555 aa18.52■□□□□ 0.56
LRFN3-203ENST00000587257 ANKRD23Q86SG2 305 aa18.52■□□□□ 0.56
LRFN3-203ENST00000587257 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.52■□□□□ 0.56
LRFN3-203ENST00000587257 ZNF341Q9BYN7 854 aa18.52■□□□□ 0.56
LRFN3-203ENST00000587257 PUS3Q9BZE2 481 aaKnown RBP18.52■□□□□ 0.56
LRFN3-203ENST00000587257 RIPOR2Q9Y4F9 1068 aa18.52■□□□□ 0.56
LRFN3-203ENST00000587257 ALDH1L1O75891 902 aa18.51■□□□□ 0.55
LRFN3-203ENST00000587257 FMNL1O95466 1100 aaPredicted RBP18.51■□□□□ 0.55
LRFN3-203ENST00000587257 GJB1P08034 283 aa18.51■□□□□ 0.55
LRFN3-203ENST00000587257 OSBPP22059 807 aa18.51■□□□□ 0.55
LRFN3-203ENST00000587257 CTGFP29279 349 aa18.51■□□□□ 0.55
LRFN3-203ENST00000587257 GJA8P48165 433 aa18.51■□□□□ 0.55
LRFN3-203ENST00000587257 ZSWIM8A7E2V4 1837 aa18.51■□□□□ 0.55
LRFN3-203ENST00000587257 MYPNQ86TC9 1320 aa18.5■□□□□ 0.55
LRFN3-203ENST00000587257 PDHXO00330 501 aa18.5■□□□□ 0.55
LRFN3-203ENST00000587257 CCL5P13501 91 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms