RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 RNF20Q5VTR2 975 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 ZSWIM6Q9HCJ5 1215 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 CD209Q9NNX6 404 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 RASSF7Q02833 373 aa24.43■■□□□ 1.5
ATG4D-204ENST00000586417 SUPT20HQ8NEM7 779 aa24.43■■□□□ 1.5
ATG4D-204ENST00000586417 JAKMIP1Q96N16 626 aaKnown RBP24.43■■□□□ 1.5
ATG4D-204ENST00000586417 TAOK3Q9H2K8 898 aa24.43■■□□□ 1.5
ATG4D-204ENST00000586417 CHMP5Q9NZZ3 219 aa24.43■■□□□ 1.5
ATG4D-204ENST00000586417 COL4A5P29400 1685 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 CASTP20810 708 aaKnown RBP24.42■■□□□ 1.5
ATG4D-204ENST00000586417 KIAA2012Q0VF49 1180 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 ZSCAN25Q6NSZ9 544 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 DBNDD1Q9H9R9 158 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 GNL3LQ9NVN8 582 aaKnown RBP24.42■■□□□ 1.5
ATG4D-204ENST00000586417 JAG2Q9Y219 1238 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 PPIP5K2O43314 1243 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 HSP90AA1P07900 732 aaKnown RBP24.42■■□□□ 1.5
ATG4D-204ENST00000586417 HSPD1P10809 573 aaKnown RBP24.42■■□□□ 1.5
ATG4D-204ENST00000586417 PRELPP51888 382 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 TDRD7Q8NHU6 1098 aaKnown RBP24.42■■□□□ 1.5
ATG4D-204ENST00000586417 TMX3Q96JJ7 454 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 PUS7LQ9H0K6 701 aaKnown RBP24.42■■□□□ 1.5
ATG4D-204ENST00000586417 FOXD4L1Q9NU39 408 aa24.42■■□□□ 1.5
ATG4D-204ENST00000586417 IDH1O75874 414 aaKnown RBP24.41■■□□□ 1.5
ATG4D-204ENST00000586417 IL1R1P14778 569 aa24.41■■□□□ 1.5
ATG4D-204ENST00000586417 CPA1P15085 419 aa24.41■■□□□ 1.5
ATG4D-204ENST00000586417 UBE3CQ15386 1083 aa24.41■■□□□ 1.5
ATG4D-204ENST00000586417 SLC9C2Q5TAH2 1124 aa24.41■■□□□ 1.5
ATG4D-204ENST00000586417 ARHGAP27Q6ZUM4 889 aa24.41■■□□□ 1.5
ATG4D-204ENST00000586417 CCDC88AQ3V6T2 1871 aa24.4■■□□□ 1.5
ATG4D-204ENST00000586417 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
ATG4D-204ENST00000586417 FOXP2O15409 715 aa24.4■■□□□ 1.5
ATG4D-204ENST00000586417 FRAT2O75474 233 aaPredicted RBP24.4■■□□□ 1.5
ATG4D-204ENST00000586417 PDE6AP16499 860 aa24.4■■□□□ 1.5
ATG4D-204ENST00000586417 COA1Q9GZY4 146 aa24.4■■□□□ 1.5
ATG4D-204ENST00000586417 KCNQ5Q9NR82 932 aa24.39■■□□□ 1.5
ATG4D-204ENST00000586417 CIZ1Q9ULV3 898 aaPredicted RBP24.39■■□□□ 1.5
ATG4D-204ENST00000586417 SCN9AQ15858 1988 aa24.39■■□□□ 1.5
ATG4D-204ENST00000586417 CYP21A2P08686 494 aa24.39■■□□□ 1.49
ATG4D-204ENST00000586417 COL9A3Q14050 684 aaPredicted RBP24.39■■□□□ 1.49
ATG4D-204ENST00000586417 RUFY3Q7L099 469 aa24.39■■□□□ 1.49
ATG4D-204ENST00000586417 G3V3G9 751 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 IARSP41252 1262 aaKnown RBP24.38■■□□□ 1.49
ATG4D-204ENST00000586417 AK2P54819 239 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 CHAF1AQ13111 956 aaPredicted RBP24.38■■□□□ 1.49
ATG4D-204ENST00000586417 CUL4AQ13619 759 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 NBR1Q14596 966 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 DCAF8Q5TAQ9 597 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 CYP46A1Q9Y6A2 500 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 ZNF532Q9HCE3 1301 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 LTBP3Q9NS15 1303 aa24.38■■□□□ 1.49
ATG4D-204ENST00000586417 ECE2O60344 883 aa24.37■■□□□ 1.49
ATG4D-204ENST00000586417 PSMA5P28066 241 aa24.37■■□□□ 1.49
ATG4D-204ENST00000586417 NFKBIBQ15653 356 aa24.37■■□□□ 1.49
ATG4D-204ENST00000586417 DENND2AQ9ULE3 1009 aa24.37■■□□□ 1.49
ATG4D-204ENST00000586417 SEMA3EO15041 775 aa24.37■■□□□ 1.49
ATG4D-204ENST00000586417 GPAA1O43292 621 aa24.37■■□□□ 1.49
ATG4D-204ENST00000586417 MAP3K12Q12852 859 aa24.36■■□□□ 1.49
ATG4D-204ENST00000586417 KRT32Q14532 448 aa24.36■■□□□ 1.49
ATG4D-204ENST00000586417 NOL8Q76FK4 1167 aaKnown RBP24.36■■□□□ 1.49
ATG4D-204ENST00000586417 YDJCA8MPS7 323 aa24.35■■□□□ 1.49
ATG4D-204ENST00000586417 GPR162Q16538 588 aa24.35■■□□□ 1.49
ATG4D-204ENST00000586417 PDRG1Q9NUG6 133 aa24.35■■□□□ 1.49
ATG4D-204ENST00000586417 SBF1O95248 1867 aa24.35■■□□□ 1.49
ATG4D-204ENST00000586417 ZBTB22O15209 634 aa24.34■■□□□ 1.49
ATG4D-204ENST00000586417 GTF2IP78347 998 aa24.34■■□□□ 1.49
ATG4D-204ENST00000586417 PODNQ7Z5L7 613 aa24.34■■□□□ 1.49
ATG4D-204ENST00000586417 ZGPATQ8N5A5 531 aaKnown RBP24.34■■□□□ 1.49
ATG4D-204ENST00000586417 VPS33BQ9H267 617 aa24.34■■□□□ 1.49
ATG4D-204ENST00000586417 MAGEB6Q8N7X4 407 aa24.34■■□□□ 1.49
ATG4D-204ENST00000586417 PDS5AQ29RF7 1337 aaKnown RBP24.33■■□□□ 1.49
ATG4D-204ENST00000586417 RPS6KB1P23443 525 aa24.33■■□□□ 1.49
ATG4D-204ENST00000586417 BLOC1S2Q6QNY1 142 aa24.33■■□□□ 1.49
ATG4D-204ENST00000586417 STOX1Q6ZVD7 989 aa24.33■■□□□ 1.49
ATG4D-204ENST00000586417 ZNF646O15015 1829 aaPredicted RBP24.32■■□□□ 1.48
ATG4D-204ENST00000586417 MXD3Q9BW11 206 aa24.32■■□□□ 1.48
ATG4D-204ENST00000586417 ABCF2Q9UG63 623 aa24.32■■□□□ 1.48
ATG4D-204ENST00000586417 GRIK5Q16478 980 aa24.31■■□□□ 1.48
ATG4D-204ENST00000586417 TTLL5Q6EMB2 1281 aa24.31■■□□□ 1.48
ATG4D-204ENST00000586417 FBXW7Q969H0 707 aa24.31■■□□□ 1.48
ATG4D-204ENST00000586417 INTS4Q96HW7 963 aaKnown RBP24.31■■□□□ 1.48
ATG4D-204ENST00000586417 ALDH8A1Q9H2A2 487 aaPredicted RBP24.31■■□□□ 1.48
ATG4D-204ENST00000586417 CWC22Q9HCG8 908 aaKnown RBP24.31■■□□□ 1.48
ATG4D-204ENST00000586417 LIMCH1Q9UPQ0 1083 aa24.31■■□□□ 1.48
ATG4D-204ENST00000586417 FAM205AQ6ZU69 1335 aa24.31■■□□□ 1.48
ATG4D-204ENST00000586417 NIM1KQ8IY84 436 aa24.31■■□□□ 1.48
ATG4D-204ENST00000586417 NEK1Q96PY6 1258 aa24.31■■□□□ 1.48
ATG4D-204ENST00000586417 LAMA4Q16363 1823 aa24.3■■□□□ 1.48
ATG4D-204ENST00000586417 FGAP02671 866 aa24.3■■□□□ 1.48
ATG4D-204ENST00000586417 RAB3GAP1Q15042 981 aa24.3■■□□□ 1.48
ATG4D-204ENST00000586417 STRBPQ96SI9 672 aaKnown RBP24.3■■□□□ 1.48
ATG4D-204ENST00000586417 LRP2BPQ9P2M1 347 aa24.3■■□□□ 1.48
ATG4D-204ENST00000586417 WDR66Q8TBY9 1149 aa24.29■■□□□ 1.48
ATG4D-204ENST00000586417 CTNNA3Q9UI47 895 aa24.29■■□□□ 1.48
ATG4D-204ENST00000586417 ZNRF3Q9ULT6 936 aa24.29■■□□□ 1.48
ATG4D-204ENST00000586417 DICER1Q9UPY3 1922 aaKnown RBP24.29■■□□□ 1.48
ATG4D-204ENST00000586417 RAD17O75943 681 aa24.29■■□□□ 1.48
ATG4D-204ENST00000586417 PRDX5P30044 214 aa24.29■■□□□ 1.48
ATG4D-204ENST00000586417 MFSD14BQ5SR56 506 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms