RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 CCP110O43303 1012 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 PDE6BP35913 854 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 CRYMQ14894 314 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 PDCD2Q16342 344 aaPredicted RBP11.55□□□□□ -0.56
ZNF540-203ENST00000586134 SETDB2Q96T68 719 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 UTP14AQ9BVJ6 771 aaKnown RBP11.55□□□□□ -0.56
ZNF540-203ENST00000586134 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 RIC1Q4ADV7 1423 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
ZNF540-203ENST00000586134 GCFC2P16383 781 aaKnown RBP11.54□□□□□ -0.56
ZNF540-203ENST00000586134 SCP2P22307 547 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 PAX7P23759 505 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 CLCN6P51797 869 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 C1QTNF8P60827 252 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
ZNF540-203ENST00000586134 TTLL5Q6EMB2 1281 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 GBP6Q6ZN66 633 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
ZNF540-203ENST00000586134 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 H0YIN7 160 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 NEBLO76041 1014 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 ELF1P32519 619 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 GRIK3Q13003 919 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 NAIF1Q69YI7 327 aaPredicted RBP11.53□□□□□ -0.56
ZNF540-203ENST00000586134 PRR5LQ6MZQ0 368 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 REXO1L1PQ8IX06 675 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 TMTC2Q8N394 836 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 CCDC26Q8TAB7 109 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 VEZTQ9HBM0 779 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 IFT57Q9NWB7 429 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 TNRC6CQ9HCJ0 1690 aaKnown RBP11.53□□□□□ -0.56
ZNF540-203ENST00000586134 CD2BP2O95400 341 aaKnown RBP11.53□□□□□ -0.56
ZNF540-203ENST00000586134 TUBB4AP04350 444 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 CHRNA5P30532 468 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 TPD52L1Q16890 204 aaPredicted RBP11.53□□□□□ -0.56
ZNF540-203ENST00000586134 TTLL6Q8N841 843 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
ZNF540-203ENST00000586134 SPATS2LQ9NUQ6 558 aaKnown RBP11.53□□□□□ -0.56
ZNF540-203ENST00000586134 CPSF2Q9P2I0 782 aaKnown RBP11.53□□□□□ -0.56
ZNF540-203ENST00000586134 COG6Q9Y2V7 657 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 PCDHB15Q9Y5E8 787 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 ANKRD36CQ5JPF3 1778 aa11.53□□□□□ -0.56
ZNF540-203ENST00000586134 KLRG2A4D1S0 409 aaPredicted RBP11.52□□□□□ -0.56
ZNF540-203ENST00000586134 KINO60870 393 aaKnown RBP11.52□□□□□ -0.56
ZNF540-203ENST00000586134 BCAR3O75815 825 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 OAS2P29728 719 aaKnown RBP11.52□□□□□ -0.56
ZNF540-203ENST00000586134 MAGEA8P43361 318 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 HSP90AB4PQ58FF6 505 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 CCDC183Q5T5S1 534 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 ARHGAP27Q6ZUM4 889 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 CNBD1Q8NA66 436 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 GPBP1L1Q9HC44 474 aaPredicted RBP11.52□□□□□ -0.56
ZNF540-203ENST00000586134 IRAK4Q9NWZ3 460 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 SMC3Q9UQE7 1217 aa11.52□□□□□ -0.56
ZNF540-203ENST00000586134 NEMFO60524 1076 aa11.52□□□□□ -0.57
ZNF540-203ENST00000586134 RBM5P52756 815 aaKnown RBP eCLIP11.52□□□□□ -0.57
ZNF540-203ENST00000586134 RBBP5Q15291 538 aaKnown RBP11.52□□□□□ -0.57
ZNF540-203ENST00000586134 TTC19Q6DKK2 380 aaPredicted RBP11.52□□□□□ -0.57
ZNF540-203ENST00000586134 STYK1Q6J9G0 422 aa11.52□□□□□ -0.57
ZNF540-203ENST00000586134 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.52□□□□□ -0.57
ZNF540-203ENST00000586134 C2CD5Q86YS7 1000 aa11.52□□□□□ -0.57
ZNF540-203ENST00000586134 DDX11Q96FC9 970 aa11.52□□□□□ -0.57
ZNF540-203ENST00000586134 TSPYL4Q9UJ04 414 aa11.52□□□□□ -0.57
ZNF540-203ENST00000586134 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 CAND2O75155 1236 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 PPFIA2O75334 1257 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 HOXB7P09629 217 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 CT47B1P0C2W7 299 aaPredicted RBP11.51□□□□□ -0.57
ZNF540-203ENST00000586134 CD151P48509 253 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 LMAN1P49257 510 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 CCT2P78371 535 aaKnown RBP11.51□□□□□ -0.57
ZNF540-203ENST00000586134 ARMC2Q8NEN0 867 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 CLIP2Q9UDT6 1046 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 ADAM21Q9UKJ8 722 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 NSFL1CQ9UNZ2 370 aaKnown RBP11.51□□□□□ -0.57
ZNF540-203ENST00000586134 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
ZNF540-203ENST00000586134 AK9Q5TCS8 1911 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 MAP3K15Q6ZN16 1313 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 LTBP3Q9NS15 1303 aa11.51□□□□□ -0.57
ZNF540-203ENST00000586134 TIAM2Q8IVF5 1701 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 CHL1O00533 1208 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 ARMCX6Q7L4S7 300 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 THUMPD2Q9BTF0 503 aaKnown RBP11.5□□□□□ -0.57
ZNF540-203ENST00000586134 ADAMTS8Q9UP79 889 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 SLX4Q8IY92 1834 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 SMC1AQ14683 1233 aaKnown RBP11.5□□□□□ -0.57
ZNF540-203ENST00000586134 PTPN14Q15678 1187 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 SOGA3Q5TF21 947 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 TPTE2Q6XPS3 522 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
ZNF540-203ENST00000586134 MSL3Q8N5Y2 521 aaKnown RBP11.5□□□□□ -0.57
ZNF540-203ENST00000586134 L2HGDHQ9H9P8 463 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms