RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 TTC22Q5TAA0 569 aa20.34■□□□□ 0.85
GCDH-203ENST00000585420 TTF2Q9UNY4 1162 aaKnown RBP20.34■□□□□ 0.85
GCDH-203ENST00000585420 PCDHAC2Q9Y5I4 1007 aa20.34■□□□□ 0.85
GCDH-203ENST00000585420 WNT10BO00744 389 aa20.33■□□□□ 0.85
GCDH-203ENST00000585420 SEMA3EO15041 775 aa20.33■□□□□ 0.85
GCDH-203ENST00000585420 ERC2O15083 957 aa20.33■□□□□ 0.85
GCDH-203ENST00000585420 MMP14P50281 582 aa20.33■□□□□ 0.85
GCDH-203ENST00000585420 WDR66Q8TBY9 1149 aa20.33■□□□□ 0.85
GCDH-203ENST00000585420 ZBTB22O15209 634 aa20.33■□□□□ 0.84
GCDH-203ENST00000585420 GSPT1P15170 499 aaKnown RBP20.32■□□□□ 0.84
GCDH-203ENST00000585420 HSPA6P17066 643 aa20.32■□□□□ 0.84
GCDH-203ENST00000585420 ARID4AP29374 1257 aaPredicted RBP20.32■□□□□ 0.84
GCDH-203ENST00000585420 FMR1Q06787 632 aaKnown RBP eCLIP20.32■□□□□ 0.84
GCDH-203ENST00000585420 PI16Q6UXB8 463 aa20.32■□□□□ 0.84
GCDH-203ENST00000585420 PI4K2BQ8TCG2 481 aa20.32■□□□□ 0.84
GCDH-203ENST00000585420 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
GCDH-203ENST00000585420 PASKQ96RG2 1323 aa20.31■□□□□ 0.84
GCDH-203ENST00000585420 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
GCDH-203ENST00000585420 MCAMP43121 646 aa20.31■□□□□ 0.84
GCDH-203ENST00000585420 CFAP100Q494V2 611 aa20.31■□□□□ 0.84
GCDH-203ENST00000585420 BMP2KLQ5H9B9 411 aa20.31■□□□□ 0.84
GCDH-203ENST00000585420 CCDC158Q5M9N0 1113 aa20.31■□□□□ 0.84
GCDH-203ENST00000585420 ANGEL2Q5VTE6 544 aaKnown RBP20.31■□□□□ 0.84
GCDH-203ENST00000585420 ZBED3Q96IU2 234 aaPredicted RBP20.31■□□□□ 0.84
GCDH-203ENST00000585420 GLIS2Q9BZE0 524 aaPredicted RBP20.31■□□□□ 0.84
GCDH-203ENST00000585420 HMG20BQ9P0W2 317 aa20.31■□□□□ 0.84
GCDH-203ENST00000585420 MYH13Q9UKX3 1938 aa20.31■□□□□ 0.84
GCDH-203ENST00000585420 TRAF5O00463 557 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 PRDX5P30044 214 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 TTC39AQ5SRH9 613 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 DLK2Q6UY11 383 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 SCAF8Q9UPN6 1271 aaKnown RBP20.3■□□□□ 0.84
GCDH-203ENST00000585420 PCNTO95613 3336 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
GCDH-203ENST00000585420 DLGAP5Q15398 846 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 SPATA5Q8NB90 893 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 MTMR14Q8NCE2 650 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 DCPSQ96C86 337 aaKnown RBP20.3■□□□□ 0.84
GCDH-203ENST00000585420 PRMT6Q96LA8 375 aaPredicted RBP20.3■□□□□ 0.84
GCDH-203ENST00000585420 SUGT1Q9Y2Z0 365 aa20.3■□□□□ 0.84
GCDH-203ENST00000585420 PDS5AQ29RF7 1337 aaKnown RBP20.29■□□□□ 0.84
GCDH-203ENST00000585420 SALL1Q9NSC2 1324 aa20.29■□□□□ 0.84
GCDH-203ENST00000585420 UQCRFS1P1P0C7P4 283 aa20.29■□□□□ 0.84
GCDH-203ENST00000585420 ATP5JP18859 108 aa20.29■□□□□ 0.84
GCDH-203ENST00000585420 CDC37L1Q7L3B6 337 aa20.29■□□□□ 0.84
GCDH-203ENST00000585420 USP48Q86UV5 1035 aa20.29■□□□□ 0.84
GCDH-203ENST00000585420 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
GCDH-203ENST00000585420 SERPINA10Q9UK55 444 aa20.29■□□□□ 0.84
GCDH-203ENST00000585420 SPDYE2BA6NHP3 402 aa20.28■□□□□ 0.84
GCDH-203ENST00000585420 SPDYE6P0CI01 402 aa20.28■□□□□ 0.84
GCDH-203ENST00000585420 CRKP46108 304 aa20.28■□□□□ 0.84
GCDH-203ENST00000585420 APLP1P51693 650 aa20.28■□□□□ 0.84
GCDH-203ENST00000585420 KRT26Q7Z3Y9 468 aa20.28■□□□□ 0.84
GCDH-203ENST00000585420 SNRKQ9NRH2 765 aa20.28■□□□□ 0.84
GCDH-203ENST00000585420 ABCF2Q9UG63 623 aa20.28■□□□□ 0.84
GCDH-203ENST00000585420 TRIM6-TRIM34B2RNG4 842 aa20.27■□□□□ 0.84
GCDH-203ENST00000585420 ADM5C9JUS6 153 aa20.27■□□□□ 0.84
GCDH-203ENST00000585420 MAP4K4O95819 1239 aaPredicted RBP20.27■□□□□ 0.84
GCDH-203ENST00000585420 HTRA3P83110 453 aa20.27■□□□□ 0.84
GCDH-203ENST00000585420 ZNF512BQ96KM6 892 aaPredicted RBP20.27■□□□□ 0.84
GCDH-203ENST00000585420 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.83
GCDH-203ENST00000585420 TBC1D9Q6ZT07 1266 aa20.27■□□□□ 0.83
GCDH-203ENST00000585420 SDSP20132 328 aa20.26■□□□□ 0.83
GCDH-203ENST00000585420 SULF1Q8IWU6 871 aa20.26■□□□□ 0.83
GCDH-203ENST00000585420 ZGPATQ8N5A5 531 aaKnown RBP20.26■□□□□ 0.83
GCDH-203ENST00000585420 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
GCDH-203ENST00000585420 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
GCDH-203ENST00000585420 DIXDC1Q155Q3 683 aa20.25■□□□□ 0.83
GCDH-203ENST00000585420 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
GCDH-203ENST00000585420 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
GCDH-203ENST00000585420 MRIQ9BWK5 157 aa20.25■□□□□ 0.83
GCDH-203ENST00000585420 POLR2AP24928 1970 aaKnown RBP20.25■□□□□ 0.83
GCDH-203ENST00000585420 MAST3O60307 1309 aa20.25■□□□□ 0.83
GCDH-203ENST00000585420 PITPNM2Q9BZ72 1349 aa20.25■□□□□ 0.83
GCDH-203ENST00000585420 CLRN2A0PK11 232 aa20.24■□□□□ 0.83
GCDH-203ENST00000585420 NDUFB9Q9Y6M9 179 aa20.24■□□□□ 0.83
GCDH-203ENST00000585420 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
GCDH-203ENST00000585420 ZAP70P43403 619 aa20.24■□□□□ 0.83
GCDH-203ENST00000585420 CST9Q5W186 159 aa20.24■□□□□ 0.83
GCDH-203ENST00000585420 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.24■□□□□ 0.83
GCDH-203ENST00000585420 HAUS7Q99871 368 aa20.24■□□□□ 0.83
GCDH-203ENST00000585420 MYO1BO43795 1136 aa20.23■□□□□ 0.83
GCDH-203ENST00000585420 APOBEC3HQ6NTF7 200 aaKnown RBP20.23■□□□□ 0.83
GCDH-203ENST00000585420 HHIPL2Q6UWX4 724 aa20.23■□□□□ 0.83
GCDH-203ENST00000585420 ZDHHC15Q96MV8 337 aa20.23■□□□□ 0.83
GCDH-203ENST00000585420 TDRD3Q9H7E2 651 aaKnown RBP20.23■□□□□ 0.83
GCDH-203ENST00000585420 AKAP11Q9UKA4 1901 aa20.22■□□□□ 0.83
GCDH-203ENST00000585420 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
GCDH-203ENST00000585420 ZNF384Q8TF68 577 aa20.22■□□□□ 0.83
GCDH-203ENST00000585420 TMEM88BA6NKF7 163 aa20.22■□□□□ 0.83
GCDH-203ENST00000585420 PRAMEF18Q5VWM3 479 aa20.22■□□□□ 0.83
GCDH-203ENST00000585420 SPTY2D1Q68D10 685 aaPredicted RBP20.22■□□□□ 0.83
GCDH-203ENST00000585420 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
GCDH-203ENST00000585420 ZNF408Q9H9D4 720 aa20.22■□□□□ 0.83
GCDH-203ENST00000585420 VEZTQ9HBM0 779 aa20.22■□□□□ 0.83
GCDH-203ENST00000585420 CELF2O95319 508 aaKnown RBP20.21■□□□□ 0.83
GCDH-203ENST00000585420 MECOMQ03112 1051 aa20.21■□□□□ 0.83
GCDH-203ENST00000585420 SPDYE2Q495Y8 402 aa20.21■□□□□ 0.83
GCDH-203ENST00000585420 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
GCDH-203ENST00000585420 EDC3Q96F86 508 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms