RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 ANGEL2Q5VTE6 544 aaKnown RBP17.29■□□□□ 0.36
MKS1-213ENST00000585134 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
MKS1-213ENST00000585134 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
MKS1-213ENST00000585134 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
MKS1-213ENST00000585134 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
MKS1-213ENST00000585134 SCAF8Q9UPN6 1271 aaKnown RBP17.29■□□□□ 0.36
MKS1-213ENST00000585134 AKAP11Q9UKA4 1901 aa17.29■□□□□ 0.36
MKS1-213ENST00000585134 MAST2Q6P0Q8 1798 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 AOX1Q06278 1338 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 CLRN2A0PK11 232 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 ADM5C9JUS6 153 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 DIXDC1Q155Q3 683 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 ERICH6Q7L0X2 663 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 TEKT1Q969V4 418 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
MKS1-213ENST00000585134 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 TRAF5O00463 557 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
MKS1-213ENST00000585134 SPTY2D1Q68D10 685 aaPredicted RBP17.27■□□□□ 0.36
MKS1-213ENST00000585134 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
MKS1-213ENST00000585134 ZC3H15Q8WU90 426 aaKnown RBP17.27■□□□□ 0.36
MKS1-213ENST00000585134 DCPSQ96C86 337 aaKnown RBP17.27■□□□□ 0.36
MKS1-213ENST00000585134 GPATCH3Q96I76 525 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
MKS1-213ENST00000585134 BOLA2Q9H3K6 86 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 VEZTQ9HBM0 779 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 PIH1D3Q9NQM4 214 aaKnown RBP17.27■□□□□ 0.36
MKS1-213ENST00000585134 RAI14Q9P0K7 980 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 SERPINA10Q9UK55 444 aa17.27■□□□□ 0.36
MKS1-213ENST00000585134 ECM29Q5VYK3 1845 aa17.26■□□□□ 0.35
MKS1-213ENST00000585134 ZBTB22O15209 634 aa17.26■□□□□ 0.35
MKS1-213ENST00000585134 CYP2E1P05181 493 aaPredicted RBP17.26■□□□□ 0.35
MKS1-213ENST00000585134 MMP14P50281 582 aa17.26■□□□□ 0.35
MKS1-213ENST00000585134 KRT26Q7Z3Y9 468 aa17.26■□□□□ 0.35
MKS1-213ENST00000585134 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
MKS1-213ENST00000585134 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
MKS1-213ENST00000585134 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
MKS1-213ENST00000585134 MYO1BO43795 1136 aa17.25■□□□□ 0.35
MKS1-213ENST00000585134 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
MKS1-213ENST00000585134 SULF1Q8IWU6 871 aa17.25■□□□□ 0.35
MKS1-213ENST00000585134 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
MKS1-213ENST00000585134 MTMR14Q8NCE2 650 aa17.25■□□□□ 0.35
MKS1-213ENST00000585134 PRMT6Q96LA8 375 aaPredicted RBP17.25■□□□□ 0.35
MKS1-213ENST00000585134 TDRD3Q9H7E2 651 aaKnown RBP17.25■□□□□ 0.35
MKS1-213ENST00000585134 ZNF408Q9H9D4 720 aa17.25■□□□□ 0.35
MKS1-213ENST00000585134 GOLIM4O00461 696 aa17.24■□□□□ 0.35
MKS1-213ENST00000585134 IDH1O75874 414 aaKnown RBP17.24■□□□□ 0.35
MKS1-213ENST00000585134 MECOMQ03112 1051 aa17.24■□□□□ 0.35
MKS1-213ENST00000585134 CDC37L1Q7L3B6 337 aa17.24■□□□□ 0.35
MKS1-213ENST00000585134 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
MKS1-213ENST00000585134 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
MKS1-213ENST00000585134 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
MKS1-213ENST00000585134 PGAP2Q9UHJ9 254 aa17.24■□□□□ 0.35
MKS1-213ENST00000585134 DAGLAQ9Y4D2 1042 aa17.24■□□□□ 0.35
MKS1-213ENST00000585134 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
MKS1-213ENST00000585134 MYH2Q9UKX2 1941 aa17.23■□□□□ 0.35
MKS1-213ENST00000585134 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
MKS1-213ENST00000585134 ATP5JP18859 108 aa17.23■□□□□ 0.35
MKS1-213ENST00000585134 CACNB3P54284 484 aa17.23■□□□□ 0.35
MKS1-213ENST00000585134 HDLBPQ00341 1268 aaKnown RBP17.23■□□□□ 0.35
MKS1-213ENST00000585134 APOBEC3FQ8IUX4 373 aaKnown RBP17.23■□□□□ 0.35
MKS1-213ENST00000585134 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.23■□□□□ 0.35
MKS1-213ENST00000585134 ZDHHC15Q96MV8 337 aa17.23■□□□□ 0.35
MKS1-213ENST00000585134 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
MKS1-213ENST00000585134 MROH7-TTC4A0A0A0MT08 1334 aa17.22■□□□□ 0.35
MKS1-213ENST00000585134 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
MKS1-213ENST00000585134 POLR2AP24928 1970 aaKnown RBP17.22■□□□□ 0.35
MKS1-213ENST00000585134 DOCK2Q92608 1830 aa17.22■□□□□ 0.35
MKS1-213ENST00000585134 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
MKS1-213ENST00000585134 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
MKS1-213ENST00000585134 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 TCP10L2B9ZVM9 353 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 HSPA6P17066 643 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 MX1P20591 662 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 BTDP43251 543 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 GSTO1P78417 241 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 PRAMEF18Q5VWM3 479 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 NAA16Q6N069 864 aaPredicted RBP17.21■□□□□ 0.35
MKS1-213ENST00000585134 HHIPL2Q6UWX4 724 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 ZNF384Q8TF68 577 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
MKS1-213ENST00000585134 CDCA5Q96FF9 252 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 PAG1Q9NWQ8 432 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 TMOD2Q9NZR1 351 aa17.21■□□□□ 0.35
MKS1-213ENST00000585134 GAKO14976 1311 aa17.21■□□□□ 0.34
MKS1-213ENST00000585134 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
MKS1-213ENST00000585134 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
MKS1-213ENST00000585134 HTRA3P83110 453 aa17.2■□□□□ 0.34
MKS1-213ENST00000585134 NUCB1Q02818 461 aa17.2■□□□□ 0.34
MKS1-213ENST00000585134 TTF1Q15361 905 aaPredicted RBP17.2■□□□□ 0.34
MKS1-213ENST00000585134 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
MKS1-213ENST00000585134 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
MKS1-213ENST00000585134 HAUS7Q99871 368 aa17.2■□□□□ 0.34
MKS1-213ENST00000585134 TRPM7Q96QT4 1865 aa17.2■□□□□ 0.34
MKS1-213ENST00000585134 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
MKS1-213ENST00000585134 LDHCP07864 332 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms