RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 WEE1P30291 646 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 INPP5BP32019 993 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 CHMP4BP1P59074 171 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 PPP2R3AQ06190 1150 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 UBAP2LQ14157 1087 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 UTP4Q969X6 686 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 ZNF428Q96B54 188 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 SLC38A3Q99624 504 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 ABI2Q9NYB9 513 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 BRPF3Q9ULD4 1205 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 AMOTL2Q9Y2J4 779 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 H3BRJ5 948 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 PIK3CDO00329 1044 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 CYP11A1P05108 521 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 SLFN14P0C7P3 912 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 C19orf57Q0VDD7 668 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 COL19A1Q14993 1142 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 OR13H1Q8NG92 308 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 SLC30A3Q99726 388 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 DBNDD2Q9BQY9 259 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 SUV39H2Q9H5I1 410 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 USTQ9Y2C2 406 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 DNMT1P26358 1616 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 UNC13BO14795 1591 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 ATP2B4P23634 1241 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 PKN1Q16512 942 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 NUTM2GQ5VZR2 741 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 CEP135Q66GS9 1140 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 KRT25Q7Z3Z0 450 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 CCER1Q8TC90 406 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 ATP10BO94823 1461 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 DIP2CQ9Y2E4 1556 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 IQGAP1P46940 1657 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 CTTNBP2Q8WZ74 1663 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 KDM5DQ9BY66 1539 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 LOC105371045A0A1W2PR82 267 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 SASH3O75995 380 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 WNT11O96014 354 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 NID1P14543 1247 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 GDF6Q6KF10 455 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 SNX29Q8TEQ0 813 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 TRIM11Q96F44 468 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 MISP3Q96FF7 219 aa2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 SOX17Q9H6I2 414 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 COL16A1Q07092 1604 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-211ENST00000584897 CARNS1A5YM72 827 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 XRCC5P13010 732 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 LMNB1P20700 586 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 AFF1P51825 1210 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 RSPO4Q2I0M5 234 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 ACAD11Q709F0 780 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 FAM53CQ9NYF3 392 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 CXXC1Q9P0U4 656 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 BTBD11A6QL63 1104 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 CANXP27824 592 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 ZAP70P43403 619 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 TSGA10IPQ3SY00 556 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 TBCELQ5QJ74 424 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 C20orf204Q6ZNR8 217 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 RGL4Q8IZJ4 473 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 FOXD4L4Q8WXT5 416 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 PBX4Q9BYU1 374 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 KCNF1Q9H3M0 494 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 PROCP04070 461 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 JUNBP17275 347 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 VAMP1P23763 118 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 IREB2P48200 963 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 AP3B2Q13367 1082 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 Q8N3U1 123 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 FRMD6Q96NE9 622 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 TPSG1Q9NRR2 321 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 FGD6Q6ZV73 1430 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 GIPC1O14908 333 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 XKR5Q6UX68 686 aa2.87□□□□□ -1.95
SMCHD1-211ENST00000584897 AHDC1Q5TGY3 1603 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 ABCC3O15438 1527 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 PHLPP1O60346 1717 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 COL8A1P27658 744 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 CLDN10P78369 228 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 CCDC27Q2M243 656 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 RNF43Q68DV7 783 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 KCT2Q8NC54 265 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 DIP2AQ14689 1571 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 MEGF11A6BM72 1044 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 F8W735 103 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 PDE2AO00408 941 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 ATP2B2Q01814 1243 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 IKBKEQ14164 716 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 RPS26P11Q5JNZ5 115 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 PERM1Q5SV97 790 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 PRR23CQ6ZRP0 262 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 ELP3Q9H9T3 547 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 PIDD1Q9HB75 910 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 EGFL7Q9UHF1 273 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 A2ML1A8K2U0 1454 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 BCL9LQ86UU0 1499 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 ROBO1Q9Y6N7 1651 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 OCLNQ16625 522 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 CDCA8Q53HL2 280 aa2.86□□□□□ -1.95
SMCHD1-211ENST00000584897 ADAM19Q9H013 955 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms