RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 GATA6Q92908 595 aa7.41□□□□□ -1.22
TTC39C-210ENST00000584424 CLP1Q92989 425 aaKnown RBP7.41□□□□□ -1.22
TTC39C-210ENST00000584424 SOX17Q9H6I2 414 aaPredicted RBP7.41□□□□□ -1.22
TTC39C-210ENST00000584424 PHACTR2O75167 634 aa7.4□□□□□ -1.22
TTC39C-210ENST00000584424 EDN3P14138 238 aa7.4□□□□□ -1.22
TTC39C-210ENST00000584424 ATP2B4P23634 1241 aa7.4□□□□□ -1.22
TTC39C-210ENST00000584424 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
TTC39C-210ENST00000584424 DYMQ7RTS9 669 aa7.4□□□□□ -1.22
TTC39C-210ENST00000584424 LATS2Q9NRM7 1088 aa7.4□□□□□ -1.22
TTC39C-210ENST00000584424 SLC5A6Q9Y289 635 aa7.4□□□□□ -1.22
TTC39C-210ENST00000584424 METTL12A8MUP2 240 aa7.39□□□□□ -1.23
TTC39C-210ENST00000584424 CYP27A1Q02318 531 aa7.39□□□□□ -1.23
TTC39C-210ENST00000584424 AKAP4Q5JQC9 854 aa7.39□□□□□ -1.23
TTC39C-210ENST00000584424 LGR6Q9HBX8 967 aa7.39□□□□□ -1.23
TTC39C-210ENST00000584424 BIN1O00499 593 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 ATG7O95352 703 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 MZF1P28698 734 aaPredicted RBP7.38□□□□□ -1.23
TTC39C-210ENST00000584424 AAMPQ13685 434 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 ZNF792Q3KQV3 632 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 LCE4AQ5TA78 99 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 BCL7CQ8WUZ0 217 aaPredicted RBP7.38□□□□□ -1.23
TTC39C-210ENST00000584424 SEMA6CQ9H3T2 930 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 RAD18Q9NS91 495 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 SLAIN2Q9P270 581 aa7.38□□□□□ -1.23
TTC39C-210ENST00000584424 FOXD3Q9UJU5 478 aaPredicted RBP7.38□□□□□ -1.23
TTC39C-210ENST00000584424 MAOBP27338 520 aa7.37□□□□□ -1.23
TTC39C-210ENST00000584424 EIF1AXP47813 144 aaKnown RBP7.37□□□□□ -1.23
TTC39C-210ENST00000584424 HELQQ8TDG4 1101 aa7.37□□□□□ -1.23
TTC39C-210ENST00000584424 BHLHE41Q9C0J9 482 aaPredicted RBP7.37□□□□□ -1.23
TTC39C-210ENST00000584424 FAM105AQ9NUU6 356 aa7.37□□□□□ -1.23
TTC39C-210ENST00000584424 POLIQ9UNA4 740 aa7.37□□□□□ -1.23
TTC39C-210ENST00000584424 AP4E1Q9UPM8 1137 aa7.37□□□□□ -1.23
TTC39C-210ENST00000584424 TNFRSF21O75509 655 aa7.36□□□□□ -1.23
TTC39C-210ENST00000584424 CTSBP07858 339 aa7.36□□□□□ -1.23
TTC39C-210ENST00000584424 MPSTP25325 297 aa7.36□□□□□ -1.23
TTC39C-210ENST00000584424 BNIP3Q12983 259 aa7.36□□□□□ -1.23
TTC39C-210ENST00000584424 SPRED2Q7Z698 418 aa7.36□□□□□ -1.23
TTC39C-210ENST00000584424 DAGLAQ9Y4D2 1042 aa7.36□□□□□ -1.23
TTC39C-210ENST00000584424 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
TTC39C-210ENST00000584424 DBX1A6NMT0 343 aa7.35□□□□□ -1.23
TTC39C-210ENST00000584424 ASPAP45381 313 aa7.35□□□□□ -1.23
TTC39C-210ENST00000584424 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
TTC39C-210ENST00000584424 POU4F3Q15319 338 aa7.35□□□□□ -1.23
TTC39C-210ENST00000584424 SNX29Q8TEQ0 813 aa7.35□□□□□ -1.23
TTC39C-210ENST00000584424 CARMIL2Q6F5E8 1435 aa7.35□□□□□ -1.23
TTC39C-210ENST00000584424 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.34□□□□□ -1.23
TTC39C-210ENST00000584424 DYNC1LI2O43237 492 aaPredicted RBP7.34□□□□□ -1.23
TTC39C-210ENST00000584424 FARP2O94887 1054 aaPredicted RBP7.34□□□□□ -1.23
TTC39C-210ENST00000584424 CYP11A1P05108 521 aa7.34□□□□□ -1.23
TTC39C-210ENST00000584424 PCDH1Q08174 1060 aa7.34□□□□□ -1.23
TTC39C-210ENST00000584424 PKN1Q16512 942 aa7.34□□□□□ -1.23
TTC39C-210ENST00000584424 TMEM132AQ24JP5 1023 aa7.34□□□□□ -1.23
TTC39C-210ENST00000584424 PEAR1Q5VY43 1037 aaPredicted RBP7.34□□□□□ -1.23
TTC39C-210ENST00000584424 STK11IPQ8N1F8 1099 aa7.34□□□□□ -1.23
TTC39C-210ENST00000584424 NRSN2Q9GZP1 204 aa7.34□□□□□ -1.23
TTC39C-210ENST00000584424 ACSS3Q9H6R3 686 aa7.34□□□□□ -1.23
TTC39C-210ENST00000584424 POLR3DP05423 398 aaPredicted RBP7.33□□□□□ -1.24
TTC39C-210ENST00000584424 MTMR3Q13615 1198 aa7.33□□□□□ -1.24
TTC39C-210ENST00000584424 FBLN7Q53RD9 439 aa7.33□□□□□ -1.24
TTC39C-210ENST00000584424 KSR1Q8IVT5 923 aa7.33□□□□□ -1.24
TTC39C-210ENST00000584424 FAM168AQ92567 244 aa7.33□□□□□ -1.24
TTC39C-210ENST00000584424 C1GALT1Q9NS00 363 aa7.33□□□□□ -1.24
TTC39C-210ENST00000584424 AMOTL2Q9Y2J4 779 aa7.33□□□□□ -1.24
TTC39C-210ENST00000584424 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
TTC39C-210ENST00000584424 ECEL1O95672 775 aa7.32□□□□□ -1.24
TTC39C-210ENST00000584424 ZNF423Q2M1K9 1284 aa7.32□□□□□ -1.24
TTC39C-210ENST00000584424 HP1BP3Q5SSJ5 553 aaPredicted RBP7.32□□□□□ -1.24
TTC39C-210ENST00000584424 OGFOD3Q6PK18 319 aa7.32□□□□□ -1.24
TTC39C-210ENST00000584424 GTF3C2Q8WUA4 911 aaPredicted RBP7.32□□□□□ -1.24
TTC39C-210ENST00000584424 KRTAP4-2Q9BYR5 136 aa7.32□□□□□ -1.24
TTC39C-210ENST00000584424 RC3H2Q9HBD1 1191 aaKnown RBP7.32□□□□□ -1.24
TTC39C-210ENST00000584424 A0A096LPE4 126 aa7.31□□□□□ -1.24
TTC39C-210ENST00000584424 A0A1W2PPZ6 126 aa7.31□□□□□ -1.24
TTC39C-210ENST00000584424 SPRED3Q2MJR0 410 aa7.31□□□□□ -1.24
TTC39C-210ENST00000584424 ALKBH2Q6NS38 261 aa7.31□□□□□ -1.24
TTC39C-210ENST00000584424 WFDC3Q8IUB2 231 aa7.31□□□□□ -1.24
TTC39C-210ENST00000584424 CORO1BQ9BR76 489 aa7.31□□□□□ -1.24
TTC39C-210ENST00000584424 CLEC4MQ9H2X3 399 aaPredicted RBP7.31□□□□□ -1.24
TTC39C-210ENST00000584424 CD8BP10966 210 aa7.3□□□□□ -1.24
TTC39C-210ENST00000584424 PDE3AQ14432 1141 aa7.3□□□□□ -1.24
TTC39C-210ENST00000584424 CYP27C1Q4G0S4 372 aa7.3□□□□□ -1.24
TTC39C-210ENST00000584424 SEZ6L2Q6UXD5 910 aa7.3□□□□□ -1.24
TTC39C-210ENST00000584424 SPOCD1Q6ZMY3 1216 aa7.3□□□□□ -1.24
TTC39C-210ENST00000584424 PLD6Q8N2A8 252 aaKnown RBP7.3□□□□□ -1.24
TTC39C-210ENST00000584424 FAM181AQ8N9Y4 354 aa7.3□□□□□ -1.24
TTC39C-210ENST00000584424 RNASE1P07998 156 aaKnown RBP7.29□□□□□ -1.24
TTC39C-210ENST00000584424 CD96P40200 585 aa7.29□□□□□ -1.24
TTC39C-210ENST00000584424 GRIA4P48058 902 aa7.29□□□□□ -1.24
TTC39C-210ENST00000584424 EHHADHQ08426 723 aa7.29□□□□□ -1.24
TTC39C-210ENST00000584424 ATG4DQ86TL0 474 aaPredicted RBP7.29□□□□□ -1.24
TTC39C-210ENST00000584424 SLC38A3Q99624 504 aa7.29□□□□□ -1.24
TTC39C-210ENST00000584424 ZFYVE1Q9HBF4 777 aa7.29□□□□□ -1.24
TTC39C-210ENST00000584424 FUT4P22083 530 aa7.28□□□□□ -1.24
TTC39C-210ENST00000584424 CDK5R2Q13319 367 aa7.28□□□□□ -1.24
TTC39C-210ENST00000584424 GLIS3Q8NEA6 775 aa7.28□□□□□ -1.24
TTC39C-210ENST00000584424 PI4K2BQ8TCG2 481 aa7.28□□□□□ -1.24
TTC39C-210ENST00000584424 NETO1Q8TDF5 533 aa7.28□□□□□ -1.24
TTC39C-210ENST00000584424 MISP3Q96FF7 219 aa7.28□□□□□ -1.24
TTC39C-210ENST00000584424 LIN7BQ9HAP6 207 aa7.28□□□□□ -1.24
TTC39C-210ENST00000584424 ZFYVE28Q9HCC9 887 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms