RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 GOLIM4O00461 696 aa10.17□□□□□ -0.78
ERBB2-216ENST00000584014 SEMA3EO15041 775 aa10.17□□□□□ -0.78
ERBB2-216ENST00000584014 IDH1O75874 414 aaKnown RBP10.17□□□□□ -0.78
ERBB2-216ENST00000584014 LDHBP07195 334 aaKnown RBP10.17□□□□□ -0.78
ERBB2-216ENST00000584014 MX1P20591 662 aa10.17□□□□□ -0.78
ERBB2-216ENST00000584014 RPS12P25398 132 aaKnown RBP10.17□□□□□ -0.78
ERBB2-216ENST00000584014 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
ERBB2-216ENST00000584014 NUCB1Q02818 461 aa10.17□□□□□ -0.78
ERBB2-216ENST00000584014 SPTY2D1Q68D10 685 aaPredicted RBP10.17□□□□□ -0.78
ERBB2-216ENST00000584014 EDC3Q96F86 508 aaKnown RBP10.17□□□□□ -0.78
ERBB2-216ENST00000584014 PSME4Q14997 1843 aa10.17□□□□□ -0.78
ERBB2-216ENST00000584014 POTECB2RU33 542 aa10.16□□□□□ -0.78
ERBB2-216ENST00000584014 HMGB1P09429 215 aaKnown RBP10.16□□□□□ -0.78
ERBB2-216ENST00000584014 PRDX5P30044 214 aa10.16□□□□□ -0.78
ERBB2-216ENST00000584014 DLGAP5Q15398 846 aa10.16□□□□□ -0.78
ERBB2-216ENST00000584014 CENPQQ7L2Z9 268 aaPredicted RBP10.16□□□□□ -0.78
ERBB2-216ENST00000584014 SKAP1Q86WV1 359 aa10.16□□□□□ -0.78
ERBB2-216ENST00000584014 ZGPATQ8N5A5 531 aaKnown RBP10.16□□□□□ -0.78
ERBB2-216ENST00000584014 DPF2Q92785 391 aa10.16□□□□□ -0.78
ERBB2-216ENST00000584014 TAF1DQ9H5J8 278 aaPredicted RBP10.16□□□□□ -0.78
ERBB2-216ENST00000584014 ANTXR1Q9H6X2 564 aa10.16□□□□□ -0.78
ERBB2-216ENST00000584014 MYOZ2Q9NPC6 264 aa10.16□□□□□ -0.78
ERBB2-216ENST00000584014 ADARB2Q9NS39 739 aaKnown RBP10.16□□□□□ -0.78
ERBB2-216ENST00000584014 COL1A1P02452 1464 aaPredicted RBP10.16□□□□□ -0.78
ERBB2-216ENST00000584014 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 ERC2O15083 957 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 EGFRP00533 1210 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 CYP2E1P05181 493 aaPredicted RBP10.15□□□□□ -0.78
ERBB2-216ENST00000584014 ATP5JP18859 108 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 RGS3P49796 1198 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 CFAP100Q494V2 611 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 TRPM4Q8TD43 1214 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
ERBB2-216ENST00000584014 PIH1D3Q9NQM4 214 aaKnown RBP10.15□□□□□ -0.78
ERBB2-216ENST00000584014 SCAF8Q9UPN6 1271 aaKnown RBP10.15□□□□□ -0.78
ERBB2-216ENST00000584014 PCDHAC2Q9Y5I4 1007 aa10.15□□□□□ -0.78
ERBB2-216ENST00000584014 WDR90Q96KV7 1748 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 CLRN2A0PK11 232 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 CRKP46108 304 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 PDE1AP54750 535 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 MECOMQ03112 1051 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 NBPF9Q3BBW0 867 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 ERICH6BQ5W0A0 696 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 NAA16Q6N069 864 aaPredicted RBP10.14□□□□□ -0.79
ERBB2-216ENST00000584014 PNMA8AQ86V59 439 aaPredicted RBP10.14□□□□□ -0.79
ERBB2-216ENST00000584014 TEKT1Q969V4 418 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 ZNF512BQ96KM6 892 aaPredicted RBP10.14□□□□□ -0.79
ERBB2-216ENST00000584014 GMLQ99445 158 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 NOL10Q9BSC4 688 aaKnown RBP10.14□□□□□ -0.79
ERBB2-216ENST00000584014 VEZTQ9HBM0 779 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 PAG1Q9NWQ8 432 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 MYO5AQ9Y4I1 1855 aaKnown RBP10.14□□□□□ -0.79
ERBB2-216ENST00000584014 SCN4AP35499 1836 aa10.14□□□□□ -0.79
ERBB2-216ENST00000584014 MAST3O60307 1309 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 ASTN2O75129 1339 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 TTC41PQ6P2S7 1318 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 MYO1BO43795 1136 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 GLRX3O76003 335 aaKnown RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 PDE4AP27815 886 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 HIRAP54198 1017 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 FKBP1AP62942 108 aaKnown RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 MAP3K12Q12852 859 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 TTF1Q15361 905 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 MAP1SQ66K74 1059 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 USP50Q70EL3 339 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 MAGEB6Q8N7X4 407 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 DCPSQ96C86 337 aaKnown RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 HAUS7Q99871 368 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 TDRD3Q9H7E2 651 aaKnown RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-216ENST00000584014 ADAMTSL1Q8N6G6 1762 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 AKAP11Q9UKA4 1901 aa10.13□□□□□ -0.79
ERBB2-216ENST00000584014 ZNF646O15015 1829 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-216ENST00000584014 MYH2Q9UKX2 1941 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 KIF3CO14782 793 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 LDHCP07864 332 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 CYP7A1P22680 504 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 CACNB3P54284 484 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 ZNF280AP59817 542 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-216ENST00000584014 GSTO1P78417 241 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 SLC9C2Q5TAH2 1124 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 ANGEL2Q5VTE6 544 aaKnown RBP10.12□□□□□ -0.79
ERBB2-216ENST00000584014 PLEKHM2Q8IWE5 1019 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 SLF2Q8IX21 1173 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 PRMT6Q96LA8 375 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-216ENST00000584014 FSD1Q9BTV5 496 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.12□□□□□ -0.79
ERBB2-216ENST00000584014 GGA3Q9NZ52 723 aa10.12□□□□□ -0.79
ERBB2-216ENST00000584014 SALL1Q9NSC2 1324 aa10.11□□□□□ -0.79
ERBB2-216ENST00000584014 TCP10L2B9ZVM9 353 aa10.11□□□□□ -0.79
ERBB2-216ENST00000584014 WNT10BO00744 389 aa10.11□□□□□ -0.79
ERBB2-216ENST00000584014 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
ERBB2-216ENST00000584014 USP48Q86UV5 1035 aa10.11□□□□□ -0.79
ERBB2-216ENST00000584014 LDHDQ86WU2 507 aa10.11□□□□□ -0.79
ERBB2-216ENST00000584014 MIGA1Q8NAN2 632 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms