RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 UBE4AQ14139 1066 aa25.83■■□□□ 1.73
SRSF1-206ENST00000583741 KAZALD1Q96I82 304 aa25.83■■□□□ 1.73
SRSF1-206ENST00000583741 FAM84BQ96KN1 310 aaPredicted RBP25.83■■□□□ 1.73
SRSF1-206ENST00000583741 TEPSINQ96N21 525 aa25.83■■□□□ 1.73
SRSF1-206ENST00000583741 SERPINA10Q9UK55 444 aa25.83■■□□□ 1.73
SRSF1-206ENST00000583741 TESPA1A2RU30 521 aaPredicted RBP25.82■■□□□ 1.72
SRSF1-206ENST00000583741 HIBADHP31937 336 aaKnown RBP25.82■■□□□ 1.72
SRSF1-206ENST00000583741 TNFAIP1Q13829 316 aa25.82■■□□□ 1.72
SRSF1-206ENST00000583741 OPTNQ96CV9 577 aa25.82■■□□□ 1.72
SRSF1-206ENST00000583741 ERO1AQ96HE7 468 aa25.82■■□□□ 1.72
SRSF1-206ENST00000583741 SUCLG2Q96I99 432 aa25.82■■□□□ 1.72
SRSF1-206ENST00000583741 ALDH1L1O75891 902 aa25.81■■□□□ 1.72
SRSF1-206ENST00000583741 OTUD7BQ6GQQ9 843 aa25.81■■□□□ 1.72
SRSF1-206ENST00000583741 SLC4A10Q6U841 1118 aa25.81■■□□□ 1.72
SRSF1-206ENST00000583741 DZIP1LQ8IYY4 767 aaKnown RBP25.81■■□□□ 1.72
SRSF1-206ENST00000583741 PTPN22Q9Y2R2 807 aa25.81■■□□□ 1.72
SRSF1-206ENST00000583741 GRIK5Q16478 980 aa25.8■■□□□ 1.72
SRSF1-206ENST00000583741 CNKSR2Q8WXI2 1034 aa25.8■■□□□ 1.72
SRSF1-206ENST00000583741 MS4A4AQ96JQ5 239 aa25.8■■□□□ 1.72
SRSF1-206ENST00000583741 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.79■■□□□ 1.72
SRSF1-206ENST00000583741 SRCIN1Q9C0H9 1055 aa25.79■■□□□ 1.72
SRSF1-206ENST00000583741 TMEM39BQ9GZU3 492 aa25.79■■□□□ 1.72
SRSF1-206ENST00000583741 TCP10L2B9ZVM9 353 aa25.79■■□□□ 1.72
SRSF1-206ENST00000583741 CRKP46108 304 aa25.79■■□□□ 1.72
SRSF1-206ENST00000583741 INTS3Q68E01 1043 aaKnown RBP25.79■■□□□ 1.72
SRSF1-206ENST00000583741 RIPOR2Q9Y4F9 1068 aa25.79■■□□□ 1.72
SRSF1-206ENST00000583741 NBPF7P0C2Y1 421 aaPredicted RBP25.78■■□□□ 1.72
SRSF1-206ENST00000583741 SP3Q02447 781 aa25.78■■□□□ 1.72
SRSF1-206ENST00000583741 EFCC1Q9HA90 598 aa25.78■■□□□ 1.72
SRSF1-206ENST00000583741 IQSEC3Q9UPP2 1182 aaPredicted RBP25.78■■□□□ 1.72
SRSF1-206ENST00000583741 VGLL4Q14135 290 aa25.77■■□□□ 1.72
SRSF1-206ENST00000583741 BRI3BPQ8WY22 251 aa25.77■■□□□ 1.72
SRSF1-206ENST00000583741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.76■■□□□ 1.71
SRSF1-206ENST00000583741 ARMC5Q96C12 935 aa25.76■■□□□ 1.71
SRSF1-206ENST00000583741 MROH5Q6ZUA9 1318 aa25.75■■□□□ 1.71
SRSF1-206ENST00000583741 FBXO33Q7Z6M2 555 aa25.75■■□□□ 1.71
SRSF1-206ENST00000583741 UTYO14607 1347 aa25.74■■□□□ 1.71
SRSF1-206ENST00000583741 BICC1Q9H694 974 aaKnown RBP25.74■■□□□ 1.71
SRSF1-206ENST00000583741 CACNB3P54284 484 aa25.73■■□□□ 1.71
SRSF1-206ENST00000583741 CHAF1AQ13111 956 aaPredicted RBP25.73■■□□□ 1.71
SRSF1-206ENST00000583741 LRRC24Q50LG9 513 aa25.73■■□□□ 1.71
SRSF1-206ENST00000583741 ZSWIM8A7E2V4 1837 aa25.73■■□□□ 1.71
SRSF1-206ENST00000583741 CCL15-CCL14A0A0B4J2E2 113 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 TNNI2P48788 182 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 MAP3K9P80192 1104 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 CCL15Q16663 113 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 RABL6Q3YEC7 729 aaPredicted RBP25.72■■□□□ 1.71
SRSF1-206ENST00000583741 OTUD5Q96G74 571 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 EN2P19622 333 aaPredicted RBP25.72■■□□□ 1.71
SRSF1-206ENST00000583741 TAF1CQ15572 869 aaPredicted RBP25.72■■□□□ 1.71
SRSF1-206ENST00000583741 VPS37DQ86XT2 251 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 FAM43AQ8N2R8 423 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 ANKRD44Q8N8A2 993 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 VGLL2Q8N8G2 317 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 CDCA7LQ96GN5 454 aa25.72■■□□□ 1.71
SRSF1-206ENST00000583741 GTF2A2P52657 109 aa25.71■■□□□ 1.71
SRSF1-206ENST00000583741 CSADQ9Y600 493 aa25.71■■□□□ 1.71
SRSF1-206ENST00000583741 METTL24Q5JXM2 366 aa25.7■■□□□ 1.7
SRSF1-206ENST00000583741 HDLBPQ00341 1268 aaKnown RBP25.69■■□□□ 1.7
SRSF1-206ENST00000583741 KLHDC4Q8TBB5 520 aa25.69■■□□□ 1.7
SRSF1-206ENST00000583741 TBC1D22AQ8WUA7 517 aa25.69■■□□□ 1.7
SRSF1-206ENST00000583741 TEKT1Q969V4 418 aa25.69■■□□□ 1.7
SRSF1-206ENST00000583741 GCC1Q96CN9 775 aa25.69■■□□□ 1.7
SRSF1-206ENST00000583741 ZNF333Q96JL9 665 aa25.69■■□□□ 1.7
SRSF1-206ENST00000583741 ZFYVE28Q9HCC9 887 aa25.69■■□□□ 1.7
SRSF1-206ENST00000583741 SNCAIPQ9Y6H5 919 aa25.69■■□□□ 1.7
SRSF1-206ENST00000583741 MYH13Q9UKX3 1938 aa25.68■■□□□ 1.7
SRSF1-206ENST00000583741 SPDYE5A6NIY4 337 aa25.68■■□□□ 1.7
SRSF1-206ENST00000583741 CAVIN4Q5BKX8 364 aa25.68■■□□□ 1.7
SRSF1-206ENST00000583741 PTCH2Q9Y6C5 1203 aa25.68■■□□□ 1.7
SRSF1-206ENST00000583741 E9PSI1 815 aa25.67■■□□□ 1.7
SRSF1-206ENST00000583741 FRAT2O75474 233 aaPredicted RBP25.67■■□□□ 1.7
SRSF1-206ENST00000583741 PDE8BO95263 885 aa25.67■■□□□ 1.7
SRSF1-206ENST00000583741 BCAMP50895 628 aa25.67■■□□□ 1.7
SRSF1-206ENST00000583741 SLFN5Q08AF3 891 aa25.67■■□□□ 1.7
SRSF1-206ENST00000583741 ZDHHC15Q96MV8 337 aa25.66■■□□□ 1.7
SRSF1-206ENST00000583741 HABP4Q5JVS0 413 aaKnown RBP25.66■■□□□ 1.7
SRSF1-206ENST00000583741 APOBEC3HQ6NTF7 200 aaKnown RBP25.66■■□□□ 1.7
SRSF1-206ENST00000583741 ZKSCAN4Q969J2 545 aaPredicted RBP25.66■■□□□ 1.7
SRSF1-206ENST00000583741 WRNIP1Q96S55 665 aa25.66■■□□□ 1.7
SRSF1-206ENST00000583741 MRPL50Q8N5N7 158 aaKnown RBP25.65■■□□□ 1.7
SRSF1-206ENST00000583741 ARHGAP39Q9C0H5 1083 aa25.65■■□□□ 1.7
SRSF1-206ENST00000583741 CEP290O15078 2479 aa25.64■■□□□ 1.7
SRSF1-206ENST00000583741 SLC9C1Q4G0N8 1177 aa25.64■■□□□ 1.69
SRSF1-206ENST00000583741 FAM83AQ86UY5 434 aa25.64■■□□□ 1.69
SRSF1-206ENST00000583741 ERO1BQ86YB8 467 aa25.64■■□□□ 1.69
SRSF1-206ENST00000583741 IRF6O14896 467 aa25.63■■□□□ 1.69
SRSF1-206ENST00000583741 TMEM106CQ9BVX2 250 aa25.63■■□□□ 1.69
SRSF1-206ENST00000583741 MRIQ9BWK5 157 aa25.63■■□□□ 1.69
SRSF1-206ENST00000583741 TMOD2Q9NZR1 351 aa25.63■■□□□ 1.69
SRSF1-206ENST00000583741 RPAP1Q9BWH6 1393 aaPredicted RBP25.63■■□□□ 1.69
SRSF1-206ENST00000583741 BTBD19C9JJ37 291 aa25.62■■□□□ 1.69
SRSF1-206ENST00000583741 TLR2O60603 784 aa25.62■■□□□ 1.69
SRSF1-206ENST00000583741 CETPP11597 493 aa25.62■■□□□ 1.69
SRSF1-206ENST00000583741 FGFR2P21802 821 aa25.62■■□□□ 1.69
SRSF1-206ENST00000583741 ARHGEF6Q15052 776 aa25.62■■□□□ 1.69
SRSF1-206ENST00000583741 FKBP1CQ5VVH2 108 aa25.62■■□□□ 1.69
SRSF1-206ENST00000583741 TRMT2AQ8IZ69 625 aaKnown RBP25.62■■□□□ 1.69
SRSF1-206ENST00000583741 PUM3Q15397 648 aaKnown RBP25.61■■□□□ 1.69
SRSF1-206ENST00000583741 MAST3O60307 1309 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms