RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
TOP3A-215ENST00000583328 CDAN1Q8IWY9 1227 aa15.63■□□□□ 0.09
TOP3A-215ENST00000583328 SH3TC2Q8TF17 1288 aa15.63■□□□□ 0.09
TOP3A-215ENST00000583328 ZNF594Q96JF6 807 aaPredicted RBP15.63■□□□□ 0.09
TOP3A-215ENST00000583328 TEPSINQ96N21 525 aa15.63■□□□□ 0.09
TOP3A-215ENST00000583328 PRKRIP1Q9H875 184 aaPredicted RBP15.63■□□□□ 0.09
TOP3A-215ENST00000583328 MKI67P46013 3256 aaKnown RBP15.62■□□□□ 0.09
TOP3A-215ENST00000583328 TLR2O60603 784 aa15.62■□□□□ 0.09
TOP3A-215ENST00000583328 HIBADHP31937 336 aaKnown RBP15.62■□□□□ 0.09
TOP3A-215ENST00000583328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.62■□□□□ 0.09
TOP3A-215ENST00000583328 TDRD7Q8NHU6 1098 aaKnown RBP15.62■□□□□ 0.09
TOP3A-215ENST00000583328 CETPP11597 493 aa15.61■□□□□ 0.09
TOP3A-215ENST00000583328 CRKP46108 304 aa15.61■□□□□ 0.09
TOP3A-215ENST00000583328 GYG1P46976 350 aa15.61■□□□□ 0.09
TOP3A-215ENST00000583328 ARHGAP39Q9C0H5 1083 aa15.61■□□□□ 0.09
TOP3A-215ENST00000583328 HTTP42858 3142 aa15.61■□□□□ 0.09
TOP3A-215ENST00000583328 ECM2O94769 699 aaPredicted RBP15.6■□□□□ 0.09
TOP3A-215ENST00000583328 PRMT2P55345 433 aa15.6■□□□□ 0.09
TOP3A-215ENST00000583328 LACTBP83111 547 aaPredicted RBP15.6■□□□□ 0.09
TOP3A-215ENST00000583328 UBE4AQ14139 1066 aa15.6■□□□□ 0.09
TOP3A-215ENST00000583328 CHRDL2Q6WN34 429 aa15.6■□□□□ 0.09
TOP3A-215ENST00000583328 ERO1BQ86YB8 467 aa15.6■□□□□ 0.09
TOP3A-215ENST00000583328 DPF3Q92784 378 aa15.6■□□□□ 0.09
TOP3A-215ENST00000583328 SPDYE5A6NIY4 337 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 BTBD19C9JJ37 291 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 F6X3S4 739 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 GNRH1P01148 92 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 SNAPC2Q13487 334 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 EPHA10Q5JZY3 1008 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 BEND3Q5T5X7 828 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
TOP3A-215ENST00000583328 FAM84BQ96KN1 310 aaPredicted RBP15.59■□□□□ 0.09
TOP3A-215ENST00000583328 ZCCHC17Q9NP64 241 aaKnown RBP15.59■□□□□ 0.09
TOP3A-215ENST00000583328 RBBP6Q7Z6E9 1792 aaKnown RBP15.58■□□□□ 0.08
TOP3A-215ENST00000583328 CCDC27Q2M243 656 aa15.58■□□□□ 0.08
TOP3A-215ENST00000583328 VPS37DQ86XT2 251 aa15.58■□□□□ 0.08
TOP3A-215ENST00000583328 WRNIP1Q96S55 665 aa15.58■□□□□ 0.08
TOP3A-215ENST00000583328 SNCAIPQ9Y6H5 919 aa15.58■□□□□ 0.08
TOP3A-215ENST00000583328 IRF6O14896 467 aa15.57■□□□□ 0.08
TOP3A-215ENST00000583328 VAMP4O75379 141 aa15.57■□□□□ 0.08
TOP3A-215ENST00000583328 FRAT2O75474 233 aaPredicted RBP15.57■□□□□ 0.08
TOP3A-215ENST00000583328 HOXD10P28358 340 aa15.57■□□□□ 0.08
TOP3A-215ENST00000583328 CACNB3P54284 484 aa15.57■□□□□ 0.08
TOP3A-215ENST00000583328 CHAF1AQ13111 956 aaPredicted RBP15.57■□□□□ 0.08
TOP3A-215ENST00000583328 MTFR1Q15390 333 aa15.57■□□□□ 0.08
TOP3A-215ENST00000583328 ZKSCAN4Q969J2 545 aaPredicted RBP15.57■□□□□ 0.08
TOP3A-215ENST00000583328 TMOD2Q9NZR1 351 aa15.57■□□□□ 0.08
TOP3A-215ENST00000583328 TRIOBPQ9H2D6 2365 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 GRM8O00222 908 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 HDLBPQ00341 1268 aaKnown RBP15.56■□□□□ 0.08
TOP3A-215ENST00000583328 PPIL2Q13356 520 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 GRIK5Q16478 980 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 NKX2-3Q8TAU0 364 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 HOOK2Q96ED9 719 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 PUS3Q9BZE2 481 aaKnown RBP15.56■□□□□ 0.08
TOP3A-215ENST00000583328 C9orf78Q9NZ63 289 aaPredicted RBP15.56■□□□□ 0.08
TOP3A-215ENST00000583328 RBM27Q9P2N5 1060 aaKnown RBP15.56■□□□□ 0.08
TOP3A-215ENST00000583328 CPA4Q9UI42 421 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 IQSEC3Q9UPP2 1182 aaPredicted RBP15.56■□□□□ 0.08
TOP3A-215ENST00000583328 IL16Q14005 1332 aa15.56■□□□□ 0.08
TOP3A-215ENST00000583328 ECM29Q5VYK3 1845 aa15.55■□□□□ 0.08
TOP3A-215ENST00000583328 FMNL1O95466 1100 aaPredicted RBP15.55■□□□□ 0.08
TOP3A-215ENST00000583328 PSMC4P43686 418 aa15.55■□□□□ 0.08
TOP3A-215ENST00000583328 C17orf99Q6UX52 265 aa15.55■□□□□ 0.08
TOP3A-215ENST00000583328 RAET1EQ8TD07 263 aa15.55■□□□□ 0.08
TOP3A-215ENST00000583328 TBC1D22AQ8WUA7 517 aa15.55■□□□□ 0.08
TOP3A-215ENST00000583328 TEKT1Q969V4 418 aa15.55■□□□□ 0.08
TOP3A-215ENST00000583328 SRRDQ9UH36 339 aa15.55■□□□□ 0.08
TOP3A-215ENST00000583328 CEP290O15078 2479 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 CENPFP49454 3210 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 GRK4P32298 578 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 DCAF15Q66K64 600 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 FBXO33Q7Z6M2 555 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 FAM83AQ86UY5 434 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 SHISA4Q96DD7 197 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 HTATIP2Q9BUP3 242 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 BIN2Q9UBW5 565 aaPredicted RBP15.54■□□□□ 0.08
TOP3A-215ENST00000583328 LAMB1P07942 1786 aa15.54■□□□□ 0.08
TOP3A-215ENST00000583328 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 OSBPP22059 807 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 PPATQ06203 517 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 CAVIN4Q5BKX8 364 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 MIGA2Q7L4E1 593 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
TOP3A-215ENST00000583328 TRIM47Q96LD4 638 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 ZDHHC15Q96MV8 337 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 MRIQ9BWK5 157 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 ZNF341Q9BYN7 854 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 RIPOR2Q9Y4F9 1068 aa15.53■□□□□ 0.08
TOP3A-215ENST00000583328 MROH5Q6ZUA9 1318 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 PDHXO00330 501 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 GJB1P08034 283 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 CCL5P13501 91 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 CTGFP29279 349 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 GJA8P48165 433 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 UBXN2AP68543 259 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 EXOSC9Q06265 439 aaKnown RBP15.52■□□□□ 0.08
TOP3A-215ENST00000583328 FKBP1CQ5VVH2 108 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 ANKRD23Q86SG2 305 aa15.52■□□□□ 0.08
TOP3A-215ENST00000583328 RNF208Q9H0X6 261 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms