RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 CWF19L2Q2TBE0 894 aaKnown RBP22.25■■□□□ 1.15
SNX11-212ENST00000583320 A0A1B0GUL6 1792 aa22.25■■□□□ 1.15
SNX11-212ENST00000583320 TESPA1A2RU30 521 aaPredicted RBP22.24■■□□□ 1.15
SNX11-212ENST00000583320 PI4KAP2A4QPH2 592 aa22.24■■□□□ 1.15
SNX11-212ENST00000583320 USP2O75604 605 aaPredicted RBP22.24■■□□□ 1.15
SNX11-212ENST00000583320 PI4KAP1Q8N8J0 262 aa22.24■■□□□ 1.15
SNX11-212ENST00000583320 MTMR14Q8NCE2 650 aa22.24■■□□□ 1.15
SNX11-212ENST00000583320 CD209Q9NNX6 404 aa22.24■■□□□ 1.15
SNX11-212ENST00000583320 PPP2R3BQ9Y5P8 575 aa22.24■■□□□ 1.15
SNX11-212ENST00000583320 PTCH2Q9Y6C5 1203 aa22.24■■□□□ 1.15
SNX11-212ENST00000583320 SPDYE2BA6NHP3 402 aa22.23■■□□□ 1.15
SNX11-212ENST00000583320 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
SNX11-212ENST00000583320 SPDYE6P0CI01 402 aa22.23■■□□□ 1.15
SNX11-212ENST00000583320 SLC4A10Q6U841 1118 aa22.23■■□□□ 1.15
SNX11-212ENST00000583320 PRMT6Q96LA8 375 aaPredicted RBP22.23■■□□□ 1.15
SNX11-212ENST00000583320 H0YGN5 161 aa22.22■■□□□ 1.15
SNX11-212ENST00000583320 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
SNX11-212ENST00000583320 CFAP100Q494V2 611 aa22.22■■□□□ 1.15
SNX11-212ENST00000583320 UBE3BQ7Z3V4 1068 aa22.22■■□□□ 1.15
SNX11-212ENST00000583320 CNKSR2Q8WXI2 1034 aa22.22■■□□□ 1.15
SNX11-212ENST00000583320 TMEM106CQ9BVX2 250 aa22.22■■□□□ 1.15
SNX11-212ENST00000583320 VEZTQ9HBM0 779 aa22.22■■□□□ 1.15
SNX11-212ENST00000583320 UNCXA6NJT0 531 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 NEURL1BA8MQ27 555 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 ALDH1L1O75891 902 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 MYCP01106 439 aaPredicted RBP22.21■■□□□ 1.15
SNX11-212ENST00000583320 ITGA6P23229 1130 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 OTUD7BQ6GQQ9 843 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 CDAN1Q8IWY9 1227 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 OTUD5Q96G74 571 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 MS4A4AQ96JQ5 239 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 SRCIN1Q9C0H9 1055 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 ANKRD2Q9GZV1 360 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 ELP3Q9H9T3 547 aa22.21■■□□□ 1.15
SNX11-212ENST00000583320 IREB2P48200 963 aaKnown RBP22.2■■□□□ 1.14
SNX11-212ENST00000583320 CHRNDQ07001 517 aa22.2■■□□□ 1.14
SNX11-212ENST00000583320 SUPT20HL1Q3ZLR7 823 aa22.2■■□□□ 1.14
SNX11-212ENST00000583320 BEND3Q5T5X7 828 aa22.2■■□□□ 1.14
SNX11-212ENST00000583320 BRI3BPQ8WY22 251 aa22.2■■□□□ 1.14
SNX11-212ENST00000583320 OPTNQ96CV9 577 aa22.2■■□□□ 1.14
SNX11-212ENST00000583320 JAG2Q9Y219 1238 aa22.2■■□□□ 1.14
SNX11-212ENST00000583320 H7C1W4 665 aa22.19■■□□□ 1.14
SNX11-212ENST00000583320 RASA3Q14644 834 aa22.19■■□□□ 1.14
SNX11-212ENST00000583320 SLC9C1Q4G0N8 1177 aa22.19■■□□□ 1.14
SNX11-212ENST00000583320 ANKRD13AQ8IZ07 590 aa22.19■■□□□ 1.14
SNX11-212ENST00000583320 PCDHB15Q9Y5E8 787 aa22.19■■□□□ 1.14
SNX11-212ENST00000583320 GNAI3P08754 354 aa22.18■■□□□ 1.14
SNX11-212ENST00000583320 KCNJ4P48050 445 aa22.18■■□□□ 1.14
SNX11-212ENST00000583320 CENPQQ7L2Z9 268 aaPredicted RBP22.18■■□□□ 1.14
SNX11-212ENST00000583320 LINS1Q8NG48 757 aa22.18■■□□□ 1.14
SNX11-212ENST00000583320 TAF5LO75529 589 aa22.17■■□□□ 1.14
SNX11-212ENST00000583320 CASP7P55210 303 aa22.17■■□□□ 1.14
SNX11-212ENST00000583320 HELBQ8NG08 1087 aaPredicted RBP22.17■■□□□ 1.14
SNX11-212ENST00000583320 SH3TC2Q8TF17 1288 aa22.17■■□□□ 1.14
SNX11-212ENST00000583320 MPHOSPH8Q99549 860 aa22.17■■□□□ 1.14
SNX11-212ENST00000583320 ARHGAP39Q9C0H5 1083 aa22.17■■□□□ 1.14
SNX11-212ENST00000583320 NEXNQ0ZGT2 675 aa22.16■■□□□ 1.14
SNX11-212ENST00000583320 HDAC1Q13547 482 aaPredicted RBP22.16■■□□□ 1.14
SNX11-212ENST00000583320 TAF1CQ15572 869 aaPredicted RBP22.16■■□□□ 1.14
SNX11-212ENST00000583320 SLC4A8Q2Y0W8 1093 aa22.16■■□□□ 1.14
SNX11-212ENST00000583320 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.16■■□□□ 1.14
SNX11-212ENST00000583320 FAM43AQ8N2R8 423 aa22.16■■□□□ 1.14
SNX11-212ENST00000583320 PLA2G12BQ9BX93 195 aa22.16■■□□□ 1.14
SNX11-212ENST00000583320 RWDD1Q9H446 243 aaPredicted RBP22.16■■□□□ 1.14
SNX11-212ENST00000583320 CUL9Q8IWT3 2517 aa22.16■■□□□ 1.14
SNX11-212ENST00000583320 MYO1BO43795 1136 aa22.15■■□□□ 1.14
SNX11-212ENST00000583320 CSF1RP07333 972 aa22.15■■□□□ 1.14
SNX11-212ENST00000583320 IL1R1P14778 569 aa22.15■■□□□ 1.14
SNX11-212ENST00000583320 CHRDL2Q6WN34 429 aa22.15■■□□□ 1.14
SNX11-212ENST00000583320 CCL15-CCL14A0A0B4J2E2 113 aa22.14■■□□□ 1.13
SNX11-212ENST00000583320 CCL15Q16663 113 aa22.14■■□□□ 1.13
SNX11-212ENST00000583320 C15orf52Q6ZUT6 534 aaKnown RBP22.14■■□□□ 1.13
SNX11-212ENST00000583320 TEPSINQ96N21 525 aa22.14■■□□□ 1.13
SNX11-212ENST00000583320 MEIS3Q99687 375 aa22.14■■□□□ 1.13
SNX11-212ENST00000583320 HDAC5Q9UQL6 1122 aa22.14■■□□□ 1.13
SNX11-212ENST00000583320 A0A0C4DFX4 3053 aa22.14■■□□□ 1.13
SNX11-212ENST00000583320 ARAP2Q8WZ64 1704 aa22.14■■□□□ 1.13
SNX11-212ENST00000583320 VGLL4Q14135 290 aa22.13■■□□□ 1.13
SNX11-212ENST00000583320 GCKRQ14397 625 aa22.13■■□□□ 1.13
SNX11-212ENST00000583320 NBPF11Q86T75 865 aa22.13■■□□□ 1.13
SNX11-212ENST00000583320 SHISA4Q96DD7 197 aa22.13■■□□□ 1.13
SNX11-212ENST00000583320 USP44Q9H0E7 712 aa22.13■■□□□ 1.13
SNX11-212ENST00000583320 RBM5P52756 815 aaKnown RBP eCLIP22.12■■□□□ 1.13
SNX11-212ENST00000583320 SPDYE2Q495Y8 402 aa22.12■■□□□ 1.13
SNX11-212ENST00000583320 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
SNX11-212ENST00000583320 ZFYVE28Q9HCC9 887 aa22.12■■□□□ 1.13
SNX11-212ENST00000583320 RBM27Q9P2N5 1060 aaKnown RBP22.12■■□□□ 1.13
SNX11-212ENST00000583320 ZNF70Q9UC06 446 aaPredicted RBP22.12■■□□□ 1.13
SNX11-212ENST00000583320 GNAI2P04899 355 aa22.11■■□□□ 1.13
SNX11-212ENST00000583320 FKBP1AP62942 108 aaKnown RBP22.11■■□□□ 1.13
SNX11-212ENST00000583320 COL6A3P12111 3177 aa22.11■■□□□ 1.13
SNX11-212ENST00000583320 UTYO14607 1347 aa22.1■■□□□ 1.13
SNX11-212ENST00000583320 IGHDP01880 384 aa22.1■■□□□ 1.13
SNX11-212ENST00000583320 ZNF804AQ7Z570 1209 aa22.1■■□□□ 1.13
SNX11-212ENST00000583320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.1■■□□□ 1.13
SNX11-212ENST00000583320 TMEM39BQ9GZU3 492 aa22.1■■□□□ 1.13
SNX11-212ENST00000583320 TDRD3Q9H7E2 651 aaKnown RBP22.1■■□□□ 1.13
SNX11-212ENST00000583320 UBTFL1P0CB47 393 aaPredicted RBP22.09■■□□□ 1.13
SNX11-212ENST00000583320 GTF2A2P52657 109 aa22.09■■□□□ 1.13
SNX11-212ENST00000583320 ANKRD44Q8N8A2 993 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms