RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 DLGAP5Q15398 846 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
TVP23B-210ENST00000582288 RIC3Q7Z5B4 369 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 CLMNQ96JQ2 1002 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 MS4A4AQ96JQ5 239 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 HTATIP2Q9BUP3 242 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 ZFYVE28Q9HCC9 887 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 PTCH2Q9Y6C5 1203 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 USP2O75604 605 aaPredicted RBP8.07□□□□□ -1.12
TVP23B-210ENST00000582288 GJA5P36382 358 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 GTF2A2P52657 109 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 CAP1Q01518 475 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 KIF22Q14807 665 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 UBE2Q1Q7Z7E8 422 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 KIAA0825Q8IV33 1275 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 HELBQ8NG08 1087 aaPredicted RBP8.07□□□□□ -1.12
TVP23B-210ENST00000582288 MXD3Q9BW11 206 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 CHMP4AQ9BY43 222 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 ANKRD2Q9GZV1 360 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 CWC25Q9NXE8 425 aaPredicted RBP8.07□□□□□ -1.12
TVP23B-210ENST00000582288 NR2E3Q9Y5X4 410 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 ECM29Q5VYK3 1845 aa8.07□□□□□ -1.12
TVP23B-210ENST00000582288 TLR2O60603 784 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 GJA8P48165 433 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 CTSWP56202 376 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 TNFAIP1Q13829 316 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 TTLL11Q8NHH1 800 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 DPF3Q92784 378 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 ZNF428Q96B54 188 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 OPTNQ96CV9 577 aa8.06□□□□□ -1.12
TVP23B-210ENST00000582288 WTIPA6NIX2 430 aaPredicted RBP8.05□□□□□ -1.12
TVP23B-210ENST00000582288 GJB1P08034 283 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 GTF2IP78347 998 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 LACTBP83111 547 aaPredicted RBP8.05□□□□□ -1.12
TVP23B-210ENST00000582288 TAF1CQ15572 869 aaPredicted RBP8.05□□□□□ -1.12
TVP23B-210ENST00000582288 KRT24Q2M2I5 525 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 NBPF12Q5TAG4 269 aaPredicted RBP8.05□□□□□ -1.12
TVP23B-210ENST00000582288 C15orf52Q6ZUT6 534 aaKnown RBP8.05□□□□□ -1.12
TVP23B-210ENST00000582288 TXNRD3Q86VQ6 643 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 BRI3BPQ8WY22 251 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 FBXW7Q969H0 707 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 SHISA4Q96DD7 197 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 METTL22Q9BUU2 404 aaPredicted RBP8.05□□□□□ -1.12
TVP23B-210ENST00000582288 CD209Q9NNX6 404 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 FZD1Q9UP38 647 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 LAMA3Q16787 3333 aa8.05□□□□□ -1.12
TVP23B-210ENST00000582288 KIAA0100Q14667 2235 aaKnown RBP8.05□□□□□ -1.12
TVP23B-210ENST00000582288 CCL15-CCL14A0A0B4J2E2 113 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 ZBTB7BO15156 539 aaPredicted RBP8.04□□□□□ -1.12
TVP23B-210ENST00000582288 DDX58O95786 925 aaKnown RBP8.04□□□□□ -1.12
TVP23B-210ENST00000582288 HOXD10P28358 340 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 IGHMBP2P38935 993 aaKnown RBP8.04□□□□□ -1.12
TVP23B-210ENST00000582288 RASA3Q14644 834 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 CCL15Q16663 113 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 SH3TC2Q8TF17 1288 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 PRMT6Q96LA8 375 aaPredicted RBP8.04□□□□□ -1.12
TVP23B-210ENST00000582288 MYD88Q99836 296 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 UNC80Q8N2C7 3258 aa8.04□□□□□ -1.12
TVP23B-210ENST00000582288 SPDYE5A6NIY4 337 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 CETPP11597 493 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 IL1R1P14778 569 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 MAP3K9P80192 1104 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 CFAP100Q494V2 611 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.03□□□□□ -1.12
TVP23B-210ENST00000582288 FAM43AQ8N2R8 423 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 CERS5Q8N5B7 392 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.03□□□□□ -1.12
TVP23B-210ENST00000582288 CCER1Q8TC90 406 aaPredicted RBP8.03□□□□□ -1.12
TVP23B-210ENST00000582288 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
TVP23B-210ENST00000582288 GREM2Q9H772 168 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 ELP3Q9H9T3 547 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 CSADQ9Y600 493 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 IRS2Q9Y4H2 1338 aa8.03□□□□□ -1.12
TVP23B-210ENST00000582288 GRK4P32298 578 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 BMP8BP34820 402 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 VGLL4Q14135 290 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 TEPSINQ96N21 525 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 PLA2G12BQ9BX93 195 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 PHAXQ9H814 394 aaKnown RBP8.02□□□□□ -1.13
TVP23B-210ENST00000582288 VEZTQ9HBM0 779 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 SRRDQ9UH36 339 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 SERPINA10Q9UK55 444 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 OTOFQ9HC10 1997 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 TRIOBPQ9H2D6 2365 aa8.02□□□□□ -1.13
TVP23B-210ENST00000582288 MYH3P11055 1940 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 CLRN2A0PK11 232 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 H7C1W4 665 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 CSF1RP07333 972 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 KCNJ4P48050 445 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 TNNI2P48788 182 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 UBXN2AP68543 259 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 MTFR1Q15390 333 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 C17orf99Q6UX52 265 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 ZNF804AQ7Z570 1209 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 ERO1BQ86YB8 467 aa8.01□□□□□ -1.13
TVP23B-210ENST00000582288 HOOK2Q96ED9 719 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms