RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
SS18-220ENST00000582092 RTFDC1Q9BY42 306 aaPredicted RBP11.05□□□□□ -0.64
SS18-220ENST00000582092 IL25Q9H293 177 aa11.05□□□□□ -0.64
SS18-220ENST00000582092 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
SS18-220ENST00000582092 LRP2BPQ9P2M1 347 aa11.05□□□□□ -0.64
SS18-220ENST00000582092 NSFL1CQ9UNZ2 370 aaKnown RBP11.05□□□□□ -0.64
SS18-220ENST00000582092 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
SS18-220ENST00000582092 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
SS18-220ENST00000582092 G3V3G9 751 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 APPP05067 770 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 FGFR2P21802 821 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
SS18-220ENST00000582092 MCAMP43121 646 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 PHKA1P46020 1223 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 IMMTQ16891 758 aaKnown RBP11.04□□□□□ -0.64
SS18-220ENST00000582092 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 CCDC129Q6ZRS4 1044 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 ZNF589Q86UQ0 364 aaPredicted RBP11.04□□□□□ -0.64
SS18-220ENST00000582092 TMX3Q96JJ7 454 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 L3MBTL3Q96JM7 780 aaPredicted RBP11.04□□□□□ -0.64
SS18-220ENST00000582092 SEC62Q99442 399 aaKnown RBP11.04□□□□□ -0.64
SS18-220ENST00000582092 SH2B1Q9NRF2 756 aaPredicted RBP11.04□□□□□ -0.64
SS18-220ENST00000582092 HACL1Q9UJ83 578 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 SPEF2Q9C093 1822 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 LRRC37AA6NMS7 1700 aa11.04□□□□□ -0.64
SS18-220ENST00000582092 SNED1Q8TER0 1413 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 TNIP1Q15025 636 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 AOC3Q16853 763 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
SS18-220ENST00000582092 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
SS18-220ENST00000582092 KCNB2Q92953 911 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 CHMP4CQ96CF2 233 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
SS18-220ENST00000582092 NEK1Q96PY6 1258 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 DENND2AQ9ULE3 1009 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 ZNRF3Q9ULT6 936 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 MINPP1Q9UNW1 487 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 GJA3Q9Y6H8 435 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
SS18-220ENST00000582092 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
SS18-220ENST00000582092 BCAMP50895 628 aa11.02□□□□□ -0.65
SS18-220ENST00000582092 AK2P54819 239 aa11.02□□□□□ -0.65
SS18-220ENST00000582092 KIAA2012Q0VF49 1180 aa11.02□□□□□ -0.65
SS18-220ENST00000582092 UBE3CQ15386 1083 aa11.02□□□□□ -0.65
SS18-220ENST00000582092 TSGA10IPQ3SY00 556 aa11.02□□□□□ -0.65
SS18-220ENST00000582092 ZC3H12CQ9C0D7 883 aaKnown RBP11.02□□□□□ -0.65
SS18-220ENST00000582092 CYP2E1P05181 493 aaPredicted RBP11.01□□□□□ -0.65
SS18-220ENST00000582092 TRDNQ13061 729 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 SCARF1Q14162 830 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 LDHDQ86WU2 507 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 NACAP1Q9BZK3 213 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 RAI14Q9P0K7 980 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 SMC3Q9UQE7 1217 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 MAST3O60307 1309 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 ZNF541Q9H0D2 1346 aa11.01□□□□□ -0.65
SS18-220ENST00000582092 M0R2C6 588 aa11□□□□□ -0.65
SS18-220ENST00000582092 ZNF213O14771 459 aa11□□□□□ -0.65
SS18-220ENST00000582092 SEMA3EO15041 775 aa11□□□□□ -0.65
SS18-220ENST00000582092 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
SS18-220ENST00000582092 RPS6KB1P23443 525 aa11□□□□□ -0.65
SS18-220ENST00000582092 ATP2B4P23634 1241 aa11□□□□□ -0.65
SS18-220ENST00000582092 HIBADHP31937 336 aaKnown RBP11□□□□□ -0.65
SS18-220ENST00000582092 EPHX2P34913 555 aa11□□□□□ -0.65
SS18-220ENST00000582092 ADD2P35612 726 aa11□□□□□ -0.65
SS18-220ENST00000582092 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
SS18-220ENST00000582092 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
SS18-220ENST00000582092 EAPPQ56P03 285 aaPredicted RBP11□□□□□ -0.65
SS18-220ENST00000582092 SPTY2D1Q68D10 685 aaPredicted RBP11□□□□□ -0.65
SS18-220ENST00000582092 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
SS18-220ENST00000582092 PI16Q6UXB8 463 aa11□□□□□ -0.65
SS18-220ENST00000582092 RALYLQ86SE5 291 aaKnown RBP11□□□□□ -0.65
SS18-220ENST00000582092 MAGEB6Q8N7X4 407 aa11□□□□□ -0.65
SS18-220ENST00000582092 OSBP2Q969R2 916 aa11□□□□□ -0.65
SS18-220ENST00000582092 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
SS18-220ENST00000582092 PIH1D3Q9NQM4 214 aaKnown RBP11□□□□□ -0.65
SS18-220ENST00000582092 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
SS18-220ENST00000582092 ABCF2Q9UG63 623 aa11□□□□□ -0.65
SS18-220ENST00000582092 XDHP47989 1333 aa11□□□□□ -0.65
SS18-220ENST00000582092 ZNF532Q9HCE3 1301 aa11□□□□□ -0.65
SS18-220ENST00000582092 POTECB2RU33 542 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 GPAA1O43292 621 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 UFL1O94874 794 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 PDIA4P13667 645 aaKnown RBP10.99□□□□□ -0.65
SS18-220ENST00000582092 PDE6AP16499 860 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 GNAT2P19087 354 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 MCM4P33991 863 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 GYG1P46976 350 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 GPSM2P81274 684 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 CUL4AQ13619 759 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 RASGRF1Q13972 1273 aa10.99□□□□□ -0.65
SS18-220ENST00000582092 TNPO1Q92973 898 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms