RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 LRRC4CQ9HCJ2 640 aa9.44□□□□□ -0.9
SMCHD1-207ENST00000581711 ZC3H7BQ9UGR2 993 aaKnown RBP9.44□□□□□ -0.9
SMCHD1-207ENST00000581711 PHACTR2O75167 634 aa9.43□□□□□ -0.9
SMCHD1-207ENST00000581711 TNFRSF21O75509 655 aa9.43□□□□□ -0.9
SMCHD1-207ENST00000581711 DUSP27Q5VZP5 1158 aa9.43□□□□□ -0.9
SMCHD1-207ENST00000581711 ACTL7BQ9Y614 415 aa9.43□□□□□ -0.9
SMCHD1-207ENST00000581711 EIF1AXP47813 144 aaKnown RBP9.42□□□□□ -0.9
SMCHD1-207ENST00000581711 ZNF765Q7L2R6 523 aa9.42□□□□□ -0.9
SMCHD1-207ENST00000581711 SNX29Q8TEQ0 813 aa9.42□□□□□ -0.9
SMCHD1-207ENST00000581711 PAPLNO95428 1278 aa9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 NFICP08651 508 aa9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 RAB6AP20340 208 aa9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 MPSTP25325 297 aa9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 MAP7Q14244 749 aa9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 PEAR1Q5VY43 1037 aaPredicted RBP9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 LATS2Q9NRM7 1088 aa9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
SMCHD1-207ENST00000581711 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.9
SMCHD1-207ENST00000581711 CYP27A1Q02318 531 aa9.4□□□□□ -0.9
SMCHD1-207ENST00000581711 SEMA6CQ9H3T2 930 aa9.4□□□□□ -0.9
SMCHD1-207ENST00000581711 FOXD3Q9UJU5 478 aaPredicted RBP9.4□□□□□ -0.9
SMCHD1-207ENST00000581711 METTL12A8MUP2 240 aa9.39□□□□□ -0.91
SMCHD1-207ENST00000581711 CTSBP07858 339 aa9.37□□□□□ -0.91
SMCHD1-207ENST00000581711 MAOBP27338 520 aa9.37□□□□□ -0.91
SMCHD1-207ENST00000581711 ZNF648Q5T619 568 aaPredicted RBP9.37□□□□□ -0.91
SMCHD1-207ENST00000581711 BCL7CQ8WUZ0 217 aaPredicted RBP9.37□□□□□ -0.91
SMCHD1-207ENST00000581711 ACSS3Q9H6R3 686 aa9.37□□□□□ -0.91
SMCHD1-207ENST00000581711 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
SMCHD1-207ENST00000581711 SLC5A6Q9Y289 635 aa9.37□□□□□ -0.91
SMCHD1-207ENST00000581711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.36□□□□□ -0.91
SMCHD1-207ENST00000581711 PLCL1Q15111 1095 aa9.36□□□□□ -0.91
SMCHD1-207ENST00000581711 ALKBH2Q6NS38 261 aa9.36□□□□□ -0.91
SMCHD1-207ENST00000581711 ZNF574Q6ZN55 896 aaPredicted RBP9.36□□□□□ -0.91
SMCHD1-207ENST00000581711 DYMQ7RTS9 669 aa9.36□□□□□ -0.91
SMCHD1-207ENST00000581711 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
SMCHD1-207ENST00000581711 AMOTL2Q9Y2J4 779 aa9.36□□□□□ -0.91
SMCHD1-207ENST00000581711 PCDH1Q08174 1060 aa9.35□□□□□ -0.91
SMCHD1-207ENST00000581711 AKAP4Q5JQC9 854 aa9.35□□□□□ -0.91
SMCHD1-207ENST00000581711 LCE4AQ5TA78 99 aa9.35□□□□□ -0.91
SMCHD1-207ENST00000581711 GTF3C2Q8WUA4 911 aaPredicted RBP9.35□□□□□ -0.91
SMCHD1-207ENST00000581711 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
SMCHD1-207ENST00000581711 CYP11A1P05108 521 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 EHHADHQ08426 723 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 MTMR3Q13615 1198 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 POU4F3Q15319 338 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 ZNF792Q3KQV3 632 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 HP1BP3Q5SSJ5 553 aaPredicted RBP9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 CLEC4MQ9H2X3 399 aaPredicted RBP9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 C1GALT1Q9NS00 363 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 AP4E1Q9UPM8 1137 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.34□□□□□ -0.91
SMCHD1-207ENST00000581711 BIN1O00499 593 aa9.33□□□□□ -0.92
SMCHD1-207ENST00000581711 ZNF423Q2M1K9 1284 aa9.33□□□□□ -0.92
SMCHD1-207ENST00000581711 SEZ6L2Q6UXD5 910 aa9.33□□□□□ -0.92
SMCHD1-207ENST00000581711 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
SMCHD1-207ENST00000581711 STK11IPQ8N1F8 1099 aa9.33□□□□□ -0.92
SMCHD1-207ENST00000581711 CARMIL2Q6F5E8 1435 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 A0A096LPE4 126 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 A0A1W2PPZ6 126 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 DYNC1LI2O43237 492 aaPredicted RBP9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 ASPAP45381 313 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 USP5P45974 858 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 AAMPQ13685 434 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 ZNF124Q15973 351 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 GSX1Q9H4S2 264 aaPredicted RBP9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 RAD18Q9NS91 495 aa9.32□□□□□ -0.92
SMCHD1-207ENST00000581711 OGFOD3Q6PK18 319 aa9.31□□□□□ -0.92
SMCHD1-207ENST00000581711 CCNJLQ8IV13 435 aa9.31□□□□□ -0.92
SMCHD1-207ENST00000581711 DAGLAQ9Y4D2 1042 aa9.31□□□□□ -0.92
SMCHD1-207ENST00000581711 ECEL1O95672 775 aa9.3□□□□□ -0.92
SMCHD1-207ENST00000581711 POLR3DP05423 398 aaPredicted RBP9.3□□□□□ -0.92
SMCHD1-207ENST00000581711 GRIA4P48058 902 aa9.3□□□□□ -0.92
SMCHD1-207ENST00000581711 TRIM56Q9BRZ2 755 aaKnown RBP9.3□□□□□ -0.92
SMCHD1-207ENST00000581711 ZFYVE1Q9HBF4 777 aa9.3□□□□□ -0.92
SMCHD1-207ENST00000581711 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
SMCHD1-207ENST00000581711 DBX1A6NMT0 343 aa9.29□□□□□ -0.92
SMCHD1-207ENST00000581711 NPR3P17342 541 aa9.29□□□□□ -0.92
SMCHD1-207ENST00000581711 SPRED3Q2MJR0 410 aa9.29□□□□□ -0.92
SMCHD1-207ENST00000581711 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
SMCHD1-207ENST00000581711 LGR6Q9HBX8 967 aa9.29□□□□□ -0.92
SMCHD1-207ENST00000581711 FZD6O60353 706 aa9.28□□□□□ -0.92
SMCHD1-207ENST00000581711 BNIP3Q12983 259 aa9.28□□□□□ -0.92
SMCHD1-207ENST00000581711 MISP3Q96FF7 219 aa9.28□□□□□ -0.92
SMCHD1-207ENST00000581711 TCF12Q99081 682 aa9.28□□□□□ -0.92
SMCHD1-207ENST00000581711 KRTAP4-2Q9BYR5 136 aa9.28□□□□□ -0.92
SMCHD1-207ENST00000581711 A0A1W2PP55 124 aa9.27□□□□□ -0.93
SMCHD1-207ENST00000581711 ATG4DQ86TL0 474 aaPredicted RBP9.27□□□□□ -0.93
SMCHD1-207ENST00000581711 GJD3Q8N144 294 aa9.27□□□□□ -0.93
SMCHD1-207ENST00000581711 LIN7BQ9HAP6 207 aa9.27□□□□□ -0.93
SMCHD1-207ENST00000581711 AOC2O75106 756 aa9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 FARP2O94887 1054 aaPredicted RBP9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 FAM13AO94988 1023 aa9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 B3GALT4O96024 378 aa9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 CYP27C1Q4G0S4 372 aa9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 SPOCD1Q6ZMY3 1216 aa9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 GLIS3Q8NEA6 775 aa9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 RC3H2Q9HBD1 1191 aaKnown RBP9.26□□□□□ -0.93
SMCHD1-207ENST00000581711 FUT4P22083 530 aa9.25□□□□□ -0.93
SMCHD1-207ENST00000581711 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms