RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 CRKP46108 304 aa26.15■■□□□ 1.78
SNX11-207ENST00000580875 E9PSI1 815 aa26.14■■□□□ 1.78
SNX11-207ENST00000580875 FRAT2O75474 233 aaPredicted RBP26.14■■□□□ 1.78
SNX11-207ENST00000580875 PDE8BO95263 885 aa26.14■■□□□ 1.78
SNX11-207ENST00000580875 OTUD7BQ6GQQ9 843 aa26.14■■□□□ 1.78
SNX11-207ENST00000580875 VGLL2Q8N8G2 317 aa26.14■■□□□ 1.78
SNX11-207ENST00000580875 TBC1D22AQ8WUA7 517 aa26.14■■□□□ 1.78
SNX11-207ENST00000580875 IQSEC3Q9UPP2 1182 aaPredicted RBP26.14■■□□□ 1.78
SNX11-207ENST00000580875 LAMB1P07942 1786 aa26.13■■□□□ 1.77
SNX11-207ENST00000580875 GJA5P36382 358 aa26.13■■□□□ 1.77
SNX11-207ENST00000580875 TNNI2P48788 182 aa26.13■■□□□ 1.77
SNX11-207ENST00000580875 CHAF1AQ13111 956 aaPredicted RBP26.13■■□□□ 1.77
SNX11-207ENST00000580875 SSH1Q8WYL5 1049 aa26.13■■□□□ 1.77
SNX11-207ENST00000580875 TEPSINQ96N21 525 aa26.13■■□□□ 1.77
SNX11-207ENST00000580875 TCP10L2B9ZVM9 353 aa26.12■■□□□ 1.77
SNX11-207ENST00000580875 HDLBPQ00341 1268 aaKnown RBP26.12■■□□□ 1.77
SNX11-207ENST00000580875 GRIK5Q16478 980 aa26.12■■□□□ 1.77
SNX11-207ENST00000580875 USP44Q9H0E7 712 aa26.12■■□□□ 1.77
SNX11-207ENST00000580875 CDAN1Q8IWY9 1227 aa26.11■■□□□ 1.77
SNX11-207ENST00000580875 KLHDC4Q8TBB5 520 aa26.11■■□□□ 1.77
SNX11-207ENST00000580875 TMEM39BQ9GZU3 492 aa26.11■■□□□ 1.77
SNX11-207ENST00000580875 ELP3Q9H9T3 547 aa26.11■■□□□ 1.77
SNX11-207ENST00000580875 TESPA1A2RU30 521 aaPredicted RBP26.1■■□□□ 1.77
SNX11-207ENST00000580875 TEKT1Q969V4 418 aa26.1■■□□□ 1.77
SNX11-207ENST00000580875 OPTNQ96CV9 577 aa26.1■■□□□ 1.77
SNX11-207ENST00000580875 TRIM17Q9Y577 477 aa26.1■■□□□ 1.77
SNX11-207ENST00000580875 BCAMP50895 628 aa26.09■■□□□ 1.77
SNX11-207ENST00000580875 CRHR2Q13324 411 aa26.09■■□□□ 1.77
SNX11-207ENST00000580875 PUM3Q15397 648 aaKnown RBP26.09■■□□□ 1.77
SNX11-207ENST00000580875 PTPN18Q99952 460 aa26.09■■□□□ 1.77
SNX11-207ENST00000580875 KIF16BQ96L93 1317 aa26.09■■□□□ 1.77
SNX11-207ENST00000580875 PDE4DIPQ5VU43 2346 aa26.09■■□□□ 1.77
SNX11-207ENST00000580875 IFIT1P09914 478 aaKnown RBP26.08■■□□□ 1.77
SNX11-207ENST00000580875 SLFN5Q08AF3 891 aa26.08■■□□□ 1.77
SNX11-207ENST00000580875 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.08■■□□□ 1.77
SNX11-207ENST00000580875 OTOP1Q7RTM1 612 aa26.08■■□□□ 1.77
SNX11-207ENST00000580875 OTOFQ9HC10 1997 aa26.07■■□□□ 1.76
SNX11-207ENST00000580875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.07■■□□□ 1.76
SNX11-207ENST00000580875 ERO1AQ96HE7 468 aa26.07■■□□□ 1.76
SNX11-207ENST00000580875 ZDHHC15Q96MV8 337 aa26.07■■□□□ 1.76
SNX11-207ENST00000580875 MRIQ9BWK5 157 aa26.07■■□□□ 1.76
SNX11-207ENST00000580875 SUGT1Q9Y2Z0 365 aa26.07■■□□□ 1.76
SNX11-207ENST00000580875 FGFR2P21802 821 aa26.06■■□□□ 1.76
SNX11-207ENST00000580875 MAP3K9P80192 1104 aa26.06■■□□□ 1.76
SNX11-207ENST00000580875 VGLL4Q14135 290 aa26.06■■□□□ 1.76
SNX11-207ENST00000580875 ALDH1L2Q3SY69 923 aa26.06■■□□□ 1.76
SNX11-207ENST00000580875 MS4A4AQ96JQ5 239 aa26.06■■□□□ 1.76
SNX11-207ENST00000580875 TMOD2Q9NZR1 351 aa26.06■■□□□ 1.76
SNX11-207ENST00000580875 MAST3O60307 1309 aa26.06■■□□□ 1.76
SNX11-207ENST00000580875 CSADQ9Y600 493 aa26.05■■□□□ 1.76
SNX11-207ENST00000580875 EYA2O00167 538 aa26.04■■□□□ 1.76
SNX11-207ENST00000580875 GTF2A2P52657 109 aa26.04■■□□□ 1.76
SNX11-207ENST00000580875 CACNB3P54284 484 aa26.04■■□□□ 1.76
SNX11-207ENST00000580875 CNKSR2Q8WXI2 1034 aa26.04■■□□□ 1.76
SNX11-207ENST00000580875 SLC5A1P13866 664 aa26.03■■□□□ 1.76
SNX11-207ENST00000580875 RFX5P48382 616 aaPredicted RBP26.03■■□□□ 1.76
SNX11-207ENST00000580875 PRPF38BQ5VTL8 546 aaKnown RBP26.03■■□□□ 1.76
SNX11-207ENST00000580875 APOBEC3HQ6NTF7 200 aaKnown RBP26.03■■□□□ 1.76
SNX11-207ENST00000580875 CD99L2Q8TCZ2 262 aa26.03■■□□□ 1.76
SNX11-207ENST00000580875 LPIN2Q92539 896 aa26.03■■□□□ 1.76
SNX11-207ENST00000580875 SMC4Q9NTJ3 1288 aa26.03■■□□□ 1.76
SNX11-207ENST00000580875 SP3Q02447 781 aa26.02■■□□□ 1.76
SNX11-207ENST00000580875 FKBP1CQ5VVH2 108 aa26.02■■□□□ 1.76
SNX11-207ENST00000580875 FAM83AQ86UY5 434 aa26.02■■□□□ 1.76
SNX11-207ENST00000580875 BRI3BPQ8WY22 251 aa26.02■■□□□ 1.76
SNX11-207ENST00000580875 HTTP42858 3142 aa26.02■■□□□ 1.76
SNX11-207ENST00000580875 CCL15-CCL14A0A0B4J2E2 113 aa26.01■■□□□ 1.75
SNX11-207ENST00000580875 CCL15Q16663 113 aa26.01■■□□□ 1.75
SNX11-207ENST00000580875 INTS3Q68E01 1043 aaKnown RBP26.01■■□□□ 1.75
SNX11-207ENST00000580875 HHIPL2Q6UWX4 724 aa26.01■■□□□ 1.75
SNX11-207ENST00000580875 HOOK2Q96ED9 719 aa26.01■■□□□ 1.75
SNX11-207ENST00000580875 OTUD5Q96G74 571 aa26.01■■□□□ 1.75
SNX11-207ENST00000580875 EFCC1Q9HA90 598 aa26.01■■□□□ 1.75
SNX11-207ENST00000580875 PTPN22Q9Y2R2 807 aa26.01■■□□□ 1.75
SNX11-207ENST00000580875 WDR66Q8TBY9 1149 aa26■■□□□ 1.75
SNX11-207ENST00000580875 CDCA7LQ96GN5 454 aa26■■□□□ 1.75
SNX11-207ENST00000580875 SPDYE5A6NIY4 337 aa25.99■■□□□ 1.75
SNX11-207ENST00000580875 ATG9AQ7Z3C6 839 aa25.99■■□□□ 1.75
SNX11-207ENST00000580875 WRNIP1Q96S55 665 aa25.99■■□□□ 1.75
SNX11-207ENST00000580875 RPAP1Q9BWH6 1393 aaPredicted RBP25.98■■□□□ 1.75
SNX11-207ENST00000580875 UBTFL1P0CB47 393 aaPredicted RBP25.98■■□□□ 1.75
SNX11-207ENST00000580875 TAF1CQ15572 869 aaPredicted RBP25.98■■□□□ 1.75
SNX11-207ENST00000580875 ZFYVE28Q9HCC9 887 aa25.98■■□□□ 1.75
SNX11-207ENST00000580875 FBXO3Q9UK99 471 aa25.98■■□□□ 1.75
SNX11-207ENST00000580875 SNCAIPQ9Y6H5 919 aa25.98■■□□□ 1.75
SNX11-207ENST00000580875 CIAO1O76071 339 aa25.97■■□□□ 1.75
SNX11-207ENST00000580875 ERO1BQ86YB8 467 aa25.97■■□□□ 1.75
SNX11-207ENST00000580875 FAM43AQ8N2R8 423 aa25.97■■□□□ 1.75
SNX11-207ENST00000580875 CT47B1P0C2W7 299 aaPredicted RBP25.96■■□□□ 1.75
SNX11-207ENST00000580875 DCAF15Q66K64 600 aa25.96■■□□□ 1.75
SNX11-207ENST00000580875 TRMT2AQ8IZ69 625 aaKnown RBP25.96■■□□□ 1.75
SNX11-207ENST00000580875 CETPP11597 493 aa25.95■■□□□ 1.74
SNX11-207ENST00000580875 ARHGEF6Q15052 776 aa25.95■■□□□ 1.74
SNX11-207ENST00000580875 ZKSCAN4Q969J2 545 aaPredicted RBP25.95■■□□□ 1.74
SNX11-207ENST00000580875 ARMC5Q96C12 935 aa25.95■■□□□ 1.74
SNX11-207ENST00000580875 SIL1Q9H173 461 aa25.95■■□□□ 1.74
SNX11-207ENST00000580875 CEP126Q9P2H0 1117 aa25.95■■□□□ 1.74
SNX11-207ENST00000580875 WDHD1O75717 1129 aaPredicted RBP25.94■■□□□ 1.74
SNX11-207ENST00000580875 CAP1Q01518 475 aa25.94■■□□□ 1.74
SNX11-207ENST00000580875 ATP2B3Q16720 1220 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms