RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 GTF2A2P52657 109 aa24.34■■□□□ 1.49
NDEL1-209ENST00000580738 LDHAL6AQ6ZMR3 332 aa24.34■■□□□ 1.49
NDEL1-209ENST00000580738 DZIP1LQ8IYY4 767 aaKnown RBP24.34■■□□□ 1.49
NDEL1-209ENST00000580738 CEP290O15078 2479 aa24.33■■□□□ 1.49
NDEL1-209ENST00000580738 MAP3K9P80192 1104 aa24.33■■□□□ 1.49
NDEL1-209ENST00000580738 ARHGEF6Q15052 776 aa24.33■■□□□ 1.49
NDEL1-209ENST00000580738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.33■■□□□ 1.49
NDEL1-209ENST00000580738 TDRD7Q8NHU6 1098 aaKnown RBP24.33■■□□□ 1.49
NDEL1-209ENST00000580738 OTUD5Q96G74 571 aa24.33■■□□□ 1.49
NDEL1-209ENST00000580738 ARHGAP39Q9C0H5 1083 aa24.33■■□□□ 1.49
NDEL1-209ENST00000580738 F6X3S4 739 aa24.32■■□□□ 1.48
NDEL1-209ENST00000580738 GYG1P46976 350 aa24.32■■□□□ 1.48
NDEL1-209ENST00000580738 SH3TC2Q8TF17 1288 aa24.32■■□□□ 1.48
NDEL1-209ENST00000580738 CNNM1Q9NRU3 951 aa24.32■■□□□ 1.48
NDEL1-209ENST00000580738 H0YGN5 161 aa24.31■■□□□ 1.48
NDEL1-209ENST00000580738 CCDC27Q2M243 656 aa24.31■■□□□ 1.48
NDEL1-209ENST00000580738 CCDC57Q2TAC2 916 aa24.31■■□□□ 1.48
NDEL1-209ENST00000580738 BEND3Q5T5X7 828 aa24.31■■□□□ 1.48
NDEL1-209ENST00000580738 GRIK5Q16478 980 aa24.3■■□□□ 1.48
NDEL1-209ENST00000580738 TAF7LQ5H9L4 462 aa24.3■■□□□ 1.48
NDEL1-209ENST00000580738 FAM84BQ96KN1 310 aaPredicted RBP24.3■■□□□ 1.48
NDEL1-209ENST00000580738 CSADQ9Y600 493 aa24.3■■□□□ 1.48
NDEL1-209ENST00000580738 SZT2Q5T011 3432 aa24.3■■□□□ 1.48
NDEL1-209ENST00000580738 HIBADHP31937 336 aaKnown RBP24.29■■□□□ 1.48
NDEL1-209ENST00000580738 CRKP46108 304 aa24.29■■□□□ 1.48
NDEL1-209ENST00000580738 TRIOBPQ9H2D6 2365 aa24.29■■□□□ 1.48
NDEL1-209ENST00000580738 VAMP4O75379 141 aa24.28■■□□□ 1.48
NDEL1-209ENST00000580738 SPDYE5A6NIY4 337 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 TLR2O60603 784 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 TNNI2P48788 182 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 CACNB3P54284 484 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 LACTBP83111 547 aaPredicted RBP24.27■■□□□ 1.48
NDEL1-209ENST00000580738 UBE4AQ14139 1066 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 CCDC184Q52MB2 194 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 PUS3Q9BZE2 481 aaKnown RBP24.27■■□□□ 1.48
NDEL1-209ENST00000580738 SNCAIPQ9Y6H5 919 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 IL16Q14005 1332 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 FANCIQ9NVI1 1328 aa24.27■■□□□ 1.48
NDEL1-209ENST00000580738 BTBD19C9JJ37 291 aa24.26■■□□□ 1.47
NDEL1-209ENST00000580738 ZSWIM8A7E2V4 1837 aa24.26■■□□□ 1.47
NDEL1-209ENST00000580738 GRM8O00222 908 aa24.25■■□□□ 1.47
NDEL1-209ENST00000580738 ECM2O94769 699 aaPredicted RBP24.25■■□□□ 1.47
NDEL1-209ENST00000580738 CETPP11597 493 aa24.25■■□□□ 1.47
NDEL1-209ENST00000580738 ZKSCAN4Q969J2 545 aaPredicted RBP24.25■■□□□ 1.47
NDEL1-209ENST00000580738 IQSEC3Q9UPP2 1182 aaPredicted RBP24.25■■□□□ 1.47
NDEL1-209ENST00000580738 IRF6O14896 467 aa24.24■■□□□ 1.47
NDEL1-209ENST00000580738 KIF22Q14807 665 aa24.24■■□□□ 1.47
NDEL1-209ENST00000580738 ERO1BQ86YB8 467 aa24.24■■□□□ 1.47
NDEL1-209ENST00000580738 RANBP2P49792 3224 aaKnown RBP24.24■■□□□ 1.47
NDEL1-209ENST00000580738 WDHD1O75717 1129 aaPredicted RBP24.23■■□□□ 1.47
NDEL1-209ENST00000580738 WRNIP1Q96S55 665 aa24.23■■□□□ 1.47
NDEL1-209ENST00000580738 ARAP2Q8WZ64 1704 aa24.23■■□□□ 1.47
NDEL1-209ENST00000580738 EXOSC9Q06265 439 aaKnown RBP24.22■■□□□ 1.47
NDEL1-209ENST00000580738 CHAF1AQ13111 956 aaPredicted RBP24.22■■□□□ 1.47
NDEL1-209ENST00000580738 SNAPC2Q13487 334 aa24.22■■□□□ 1.47
NDEL1-209ENST00000580738 MTFR1Q15390 333 aa24.22■■□□□ 1.47
NDEL1-209ENST00000580738 CHRDL2Q6WN34 429 aa24.22■■□□□ 1.47
NDEL1-209ENST00000580738 CTGFP29279 349 aa24.21■■□□□ 1.47
NDEL1-209ENST00000580738 FBXO33Q7Z6M2 555 aa24.21■■□□□ 1.47
NDEL1-209ENST00000580738 SHISA4Q96DD7 197 aa24.21■■□□□ 1.47
NDEL1-209ENST00000580738 ZCCHC17Q9NP64 241 aaKnown RBP24.21■■□□□ 1.47
NDEL1-209ENST00000580738 C9orf78Q9NZ63 289 aaPredicted RBP24.21■■□□□ 1.47
NDEL1-209ENST00000580738 GNRH1P01148 92 aa24.2■■□□□ 1.46
NDEL1-209ENST00000580738 HDLBPQ00341 1268 aaKnown RBP24.2■■□□□ 1.46
NDEL1-209ENST00000580738 RIPOR2Q9Y4F9 1068 aa24.2■■□□□ 1.46
NDEL1-209ENST00000580738 PPIL2Q13356 520 aa24.19■■□□□ 1.46
NDEL1-209ENST00000580738 C17orf99Q6UX52 265 aa24.19■■□□□ 1.46
NDEL1-209ENST00000580738 VPS37DQ86XT2 251 aa24.19■■□□□ 1.46
NDEL1-209ENST00000580738 TEKT1Q969V4 418 aa24.19■■□□□ 1.46
NDEL1-209ENST00000580738 KAZALD1Q96I82 304 aa24.19■■□□□ 1.46
NDEL1-209ENST00000580738 SUCLG2Q96I99 432 aa24.19■■□□□ 1.46
NDEL1-209ENST00000580738 CPA4Q9UI42 421 aa24.19■■□□□ 1.46
NDEL1-209ENST00000580738 PRMT2P55345 433 aa24.18■■□□□ 1.46
NDEL1-209ENST00000580738 DPF3Q92784 378 aa24.18■■□□□ 1.46
NDEL1-209ENST00000580738 TRIM47Q96LD4 638 aa24.18■■□□□ 1.46
NDEL1-209ENST00000580738 RBM27Q9P2N5 1060 aaKnown RBP24.18■■□□□ 1.46
NDEL1-209ENST00000580738 FRAT2O75474 233 aaPredicted RBP24.17■■□□□ 1.46
NDEL1-209ENST00000580738 APOBEC3HQ6NTF7 200 aaKnown RBP24.17■■□□□ 1.46
NDEL1-209ENST00000580738 MIGA2Q7L4E1 593 aa24.17■■□□□ 1.46
NDEL1-209ENST00000580738 FAM83AQ86UY5 434 aa24.17■■□□□ 1.46
NDEL1-209ENST00000580738 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.17■■□□□ 1.46
NDEL1-209ENST00000580738 ZDHHC15Q96MV8 337 aa24.17■■□□□ 1.46
NDEL1-209ENST00000580738 SRRDQ9UH36 339 aa24.17■■□□□ 1.46
NDEL1-209ENST00000580738 SALL2Q9Y467 1007 aaPredicted RBP24.17■■□□□ 1.46
NDEL1-209ENST00000580738 CACNA1FO60840 1977 aa24.16■■□□□ 1.46
NDEL1-209ENST00000580738 MROH5Q6ZUA9 1318 aa24.16■■□□□ 1.46
NDEL1-209ENST00000580738 PSMC4P43686 418 aa24.16■■□□□ 1.46
NDEL1-209ENST00000580738 SLC4A10Q6U841 1118 aa24.16■■□□□ 1.46
NDEL1-209ENST00000580738 TBC1D22AQ8WUA7 517 aa24.16■■□□□ 1.46
NDEL1-209ENST00000580738 TMOD2Q9NZR1 351 aa24.16■■□□□ 1.46
NDEL1-209ENST00000580738 ALDH1L1O75891 902 aa24.15■■□□□ 1.46
NDEL1-209ENST00000580738 INPP5BP32019 993 aa24.15■■□□□ 1.46
NDEL1-209ENST00000580738 PPATQ06203 517 aa24.15■■□□□ 1.46
NDEL1-209ENST00000580738 LRRC24Q50LG9 513 aa24.15■■□□□ 1.46
NDEL1-209ENST00000580738 PDHXO00330 501 aa24.14■■□□□ 1.45
NDEL1-209ENST00000580738 NBPF7P0C2Y1 421 aaPredicted RBP24.14■■□□□ 1.45
NDEL1-209ENST00000580738 OSBPP22059 807 aa24.14■■□□□ 1.45
NDEL1-209ENST00000580738 BCAMP50895 628 aa24.14■■□□□ 1.45
NDEL1-209ENST00000580738 NCBP3Q53F19 620 aaKnown RBP24.14■■□□□ 1.45
NDEL1-209ENST00000580738 CAVIN4Q5BKX8 364 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms