RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ME3Q16798 604 aa17.63■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ZNF384Q8TF68 577 aa17.63■□□□□ 0.41
CDK5RAP3-218ENST00000580391 LRRC2Q9BYS8 371 aa17.63■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ALDH8A1Q9H2A2 487 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-218ENST00000580391 GGA1Q9UJY5 639 aa17.63■□□□□ 0.41
CDK5RAP3-218ENST00000580391 APPP05067 770 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 NPR1P16066 1061 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ATP2B4P23634 1241 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 PDE6BP35913 854 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ANKRD1Q15327 319 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 Q6ZUG5 572 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ZSCAN31Q96LW9 406 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 PDGFDQ9GZP0 370 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 NBPF3Q9H094 633 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 SH2B1Q9NRF2 756 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 PODXL2Q9NZ53 605 aa17.62■□□□□ 0.41
CDK5RAP3-218ENST00000580391 SLX4Q8IY92 1834 aa17.61■□□□□ 0.41
CDK5RAP3-218ENST00000580391 PRKAB2O43741 272 aa17.61■□□□□ 0.41
CDK5RAP3-218ENST00000580391 PRDX5P30044 214 aa17.61■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ZNF804AQ7Z570 1209 aa17.61■□□□□ 0.41
CDK5RAP3-218ENST00000580391 MYH2Q9UKX2 1941 aa17.61■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ZMYM6O95789 1325 aa17.61■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ZBTB22O15209 634 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 HMGB1P09429 215 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 NUCB2P80303 420 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 NAA16Q6N069 864 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 OLFM4Q6UX06 510 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 DHX32Q7L7V1 743 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 TMC4Q7Z404 712 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 TDRD7Q8NHU6 1098 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 TBC1D16Q8TBP0 767 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 POLLQ9UGP5 575 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 LAMB1P07942 1786 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 PATL2C9JE40 543 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ZNF213O14771 459 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 DTNBO60941 627 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 TBC1D10CQ8IV04 446 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 NSUN4Q96CB9 384 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
CDK5RAP3-218ENST00000580391 DLEC1Q9Y238 1755 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 GSG1L2A8MUP6 293 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 MCM4P33991 863 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 EXOSC10Q01780 885 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 MECOMQ03112 1051 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 SP8Q8IXZ3 490 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 IFNL3Q8IZI9 196 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ZDHHC9Q9Y397 364 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 SLC4A4Q9Y6R1 1079 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 MAGEB6P1A0A0J9YX57 407 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 ALX1Q15699 326 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 CHST3Q7LGC8 479 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 BRF1Q92994 677 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 MASTLQ96GX5 879 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 RIOK1Q9BRS2 568 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 NAPBQ9H115 298 aa17.59■□□□□ 0.41
CDK5RAP3-218ENST00000580391 GNAT2P19087 354 aa17.58■□□□□ 0.4
CDK5RAP3-218ENST00000580391 DYNLL1P63167 89 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-218ENST00000580391 MB21D2Q8IYB1 491 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-218ENST00000580391 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.58■□□□□ 0.4
CDK5RAP3-218ENST00000580391 CDK5RAP2Q96SN8 1893 aa17.58■□□□□ 0.4
CDK5RAP3-218ENST00000580391 SALL1Q9NSC2 1324 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 C6orf229H3BNL8 230 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 STK3Q13188 491 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 C2CD5Q86YS7 1000 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 SDR42E1Q8WUS8 393 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 CD209Q9NNX6 404 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 TDO2P48775 406 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 FGD1P98174 961 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 NKX2-3Q8TAU0 364 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.41e-10■■□□□ 12.5
CDK5RAP3-218ENST00000580391 AGXT2Q9BYV1 514 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
CDK5RAP3-218ENST00000580391 GRIK5Q16478 980 aa17.56■□□□□ 0.4
CDK5RAP3-218ENST00000580391 RALYLQ86SE5 291 aaKnown RBP17.56■□□□□ 0.4
CDK5RAP3-218ENST00000580391 NCOA7Q8NI08 942 aa17.56■□□□□ 0.4
CDK5RAP3-218ENST00000580391 WDR66Q8TBY9 1149 aa17.56■□□□□ 0.4
CDK5RAP3-218ENST00000580391 NEDD4P46934 1319 aa17.56■□□□□ 0.4
CDK5RAP3-218ENST00000580391 IL1R1P14778 569 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 ANTXR2P58335 489 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 FOXD4L5Q5VV16 416 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 DZIP1Q86YF9 867 aaKnown RBP17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 FOXD4L4Q8WXT5 416 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 GBP4Q96PP9 640 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 NAV1Q8NEY1 1877 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 TCHHQ07283 1943 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 BRD1O95696 1058 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 GJB2P29033 226 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 CHRNA5P30532 468 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 TACC3Q9Y6A5 838 aa17.55■□□□□ 0.4
CDK5RAP3-218ENST00000580391 PRC1O43663 620 aa17.54■□□□□ 0.4
CDK5RAP3-218ENST00000580391 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-218ENST00000580391 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms