RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 VGLL2Q8N8G2 317 aa13.45□□□□□ -0.26
CSNK1D-210ENST00000579308 BICC1Q9H694 974 aaKnown RBP13.45□□□□□ -0.26
CSNK1D-210ENST00000579308 TDRD3Q9H7E2 651 aaKnown RBP13.45□□□□□ -0.26
CSNK1D-210ENST00000579308 CACNA1FO60840 1977 aa13.45□□□□□ -0.26
CSNK1D-210ENST00000579308 TNFAIP1Q13829 316 aa13.44□□□□□ -0.26
CSNK1D-210ENST00000579308 LRRC24Q50LG9 513 aa13.44□□□□□ -0.26
CSNK1D-210ENST00000579308 OTOP1Q7RTM1 612 aa13.44□□□□□ -0.26
CSNK1D-210ENST00000579308 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
CSNK1D-210ENST00000579308 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
CSNK1D-210ENST00000579308 MRIQ9BWK5 157 aa13.44□□□□□ -0.26
CSNK1D-210ENST00000579308 PDE8BO95263 885 aa13.43□□□□□ -0.26
CSNK1D-210ENST00000579308 CRKP46108 304 aa13.43□□□□□ -0.26
CSNK1D-210ENST00000579308 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-210ENST00000579308 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-210ENST00000579308 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-210ENST00000579308 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 MAP3K9P80192 1104 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 CAP1Q01518 475 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 CRHR2Q13324 411 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 PRPF38BQ5VTL8 546 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 OTUD7BQ6GQQ9 843 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 OPTNQ96CV9 577 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 TMEM39BQ9GZU3 492 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 TRIM17Q9Y577 477 aa13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 MKI67P46013 3256 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-210ENST00000579308 TCP10L2B9ZVM9 353 aa13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 FGFR2P21802 821 aa13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 BCAMP50895 628 aa13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 METTL24Q5JXM2 366 aa13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 TBC1D22AQ8WUA7 517 aa13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 ELP3Q9H9T3 547 aa13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 CENPFP49454 3210 aa13.41□□□□□ -0.26
CSNK1D-210ENST00000579308 PTPRCP08575 1304 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 VGLL4Q14135 290 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 VPS37DQ86XT2 251 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 KLHDC4Q8TBB5 520 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 BRI3BPQ8WY22 251 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 ERO1AQ96HE7 468 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 PTPN22Q9Y2R2 807 aa13.4□□□□□ -0.26
CSNK1D-210ENST00000579308 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 BRCA2P51587 3418 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 TNNI2P48788 182 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 SP3Q02447 781 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 CHAF1AQ13111 956 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 FKBP1CQ5VVH2 108 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 CD99L2Q8TCZ2 262 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 A0A1B0GUL6 1792 aa13.39□□□□□ -0.27
CSNK1D-210ENST00000579308 E9PSI1 815 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 GTF2A2P52657 109 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 CACNB3P54284 484 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 SLFN5Q08AF3 891 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 FAM83AQ86UY5 434 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 ARMC5Q96C12 935 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 EFCC1Q9HA90 598 aa13.38□□□□□ -0.27
CSNK1D-210ENST00000579308 POTEFA5A3E0 1075 aa13.37□□□□□ -0.27
CSNK1D-210ENST00000579308 FRAT2O75474 233 aaPredicted RBP13.37□□□□□ -0.27
CSNK1D-210ENST00000579308 PUM3Q15397 648 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-210ENST00000579308 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
CSNK1D-210ENST00000579308 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
CSNK1D-210ENST00000579308 SNCAIPQ9Y6H5 919 aa13.37□□□□□ -0.27
CSNK1D-210ENST00000579308 CCL15-CCL14A0A0B4J2E2 113 aa13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 SPDYE5A6NIY4 337 aa13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 EYA2O00167 538 aa13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 IFIT1P09914 478 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 CCL15Q16663 113 aa13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 ATG9AQ7Z3C6 839 aa13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 FAM43AQ8N2R8 423 aa13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 CSADQ9Y600 493 aa13.36□□□□□ -0.27
CSNK1D-210ENST00000579308 ALDH1L2Q3SY69 923 aa13.35□□□□□ -0.27
CSNK1D-210ENST00000579308 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
CSNK1D-210ENST00000579308 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-210ENST00000579308 LPIN2Q92539 896 aa13.35□□□□□ -0.27
CSNK1D-210ENST00000579308 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-210ENST00000579308 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
CSNK1D-210ENST00000579308 ZFYVE28Q9HCC9 887 aa13.35□□□□□ -0.27
CSNK1D-210ENST00000579308 ECM29Q5VYK3 1845 aa13.34□□□□□ -0.27
CSNK1D-210ENST00000579308 IRF6O14896 467 aa13.34□□□□□ -0.27
CSNK1D-210ENST00000579308 TAF1CQ15572 869 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-210ENST00000579308 WDR66Q8TBY9 1149 aa13.34□□□□□ -0.27
CSNK1D-210ENST00000579308 WRNIP1Q96S55 665 aa13.34□□□□□ -0.27
CSNK1D-210ENST00000579308 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-210ENST00000579308 MAST3O60307 1309 aa13.34□□□□□ -0.27
CSNK1D-210ENST00000579308 LAMB1P07942 1786 aa13.33□□□□□ -0.28
CSNK1D-210ENST00000579308 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
CSNK1D-210ENST00000579308 ZBTB22O15209 634 aa13.33□□□□□ -0.28
CSNK1D-210ENST00000579308 TLR2O60603 784 aa13.33□□□□□ -0.28
CSNK1D-210ENST00000579308 CETPP11597 493 aa13.33□□□□□ -0.28
CSNK1D-210ENST00000579308 SLC5A1P13866 664 aa13.33□□□□□ -0.28
CSNK1D-210ENST00000579308 EN2P19622 333 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms