RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 TAF1P21675 1872 aa20.2■□□□□ 0.82
SREBF1-218ENST00000578469 BBOX1O75936 387 aa20.2■□□□□ 0.82
SREBF1-218ENST00000578469 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-218ENST00000578469 GYG1P46976 350 aa20.2■□□□□ 0.82
SREBF1-218ENST00000578469 CRAMP1Q96RY5 1269 aa20.2■□□□□ 0.82
SREBF1-218ENST00000578469 KLRG2A4D1S0 409 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-218ENST00000578469 SRGNP10124 158 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 HSPD1P10809 573 aaKnown RBP20.19■□□□□ 0.82
SREBF1-218ENST00000578469 PDE6AP16499 860 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 HOXA10P31260 410 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-218ENST00000578469 SLFNL1Q499Z3 407 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 RUFY3Q7L099 469 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 TMC4Q7Z404 712 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 FBXO33Q7Z6M2 555 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 FAM84BQ96KN1 310 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-218ENST00000578469 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
SREBF1-218ENST00000578469 PDRG1Q9NUG6 133 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
SREBF1-218ENST00000578469 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 HIBADHP31937 336 aaKnown RBP20.18■□□□□ 0.82
SREBF1-218ENST00000578469 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 LDHDQ86WU2 507 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 TMX3Q96JJ7 454 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 TTC14Q96N46 770 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 LRP2BPQ9P2M1 347 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 XDHP47989 1333 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 ZNF532Q9HCE3 1301 aa20.18■□□□□ 0.82
SREBF1-218ENST00000578469 RPAP1Q9BWH6 1393 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-218ENST00000578469 MYH7P12883 1935 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 ZBTB22O15209 634 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 GPAA1O43292 621 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-218ENST00000578469 ADCK5Q3MIX3 580 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 AIDAQ96BJ3 306 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 SCN4AP35499 1836 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 CNTNAP1P78357 1384 aa20.17■□□□□ 0.82
SREBF1-218ENST00000578469 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
SREBF1-218ENST00000578469 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
SREBF1-218ENST00000578469 ATP2B4P23634 1241 aa20.16■□□□□ 0.82
SREBF1-218ENST00000578469 DDIT3P35638 169 aa20.16■□□□□ 0.82
SREBF1-218ENST00000578469 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
SREBF1-218ENST00000578469 L3MBTL3Q96JM7 780 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-218ENST00000578469 PUS7LQ9H0K6 701 aaKnown RBP20.16■□□□□ 0.82
SREBF1-218ENST00000578469 LIMCH1Q9UPQ0 1083 aa20.16■□□□□ 0.82
SREBF1-218ENST00000578469 PDS5AQ29RF7 1337 aaKnown RBP20.16■□□□□ 0.82
SREBF1-218ENST00000578469 HMGB1P09429 215 aaKnown RBP20.15■□□□□ 0.82
SREBF1-218ENST00000578469 AK2P54819 239 aa20.15■□□□□ 0.82
SREBF1-218ENST00000578469 CUL4AQ13619 759 aa20.15■□□□□ 0.82
SREBF1-218ENST00000578469 NBR1Q14596 966 aa20.15■□□□□ 0.82
SREBF1-218ENST00000578469 MAGEB6Q8N7X4 407 aa20.15■□□□□ 0.82
SREBF1-218ENST00000578469 INTS4Q96HW7 963 aaKnown RBP20.15■□□□□ 0.82
SREBF1-218ENST00000578469 ZSCAN31Q96LW9 406 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-218ENST00000578469 NEK1Q96PY6 1258 aa20.15■□□□□ 0.82
SREBF1-218ENST00000578469 TCRBV5S4A2TA0A5A2 114 aa20.14■□□□□ 0.81
SREBF1-218ENST00000578469 CYP21A2P08686 494 aa20.14■□□□□ 0.81
SREBF1-218ENST00000578469 NPR1P16066 1061 aa20.14■□□□□ 0.81
SREBF1-218ENST00000578469 RPS6KB1P23443 525 aa20.14■□□□□ 0.81
SREBF1-218ENST00000578469 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
SREBF1-218ENST00000578469 NOL8Q76FK4 1167 aaKnown RBP20.14■□□□□ 0.81
SREBF1-218ENST00000578469 ALDH8A1Q9H2A2 487 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-218ENST00000578469 IQSEC3Q9UPP2 1182 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-218ENST00000578469 PASKQ96RG2 1323 aa20.13■□□□□ 0.81
SREBF1-218ENST00000578469 NFKBIBQ15653 356 aa20.13■□□□□ 0.81
SREBF1-218ENST00000578469 EAPPQ56P03 285 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-218ENST00000578469 C15orf52Q6ZUT6 534 aaKnown RBP20.13■□□□□ 0.81
SREBF1-218ENST00000578469 TAF1DQ9H5J8 278 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-218ENST00000578469 RAI14Q9P0K7 980 aa20.13■□□□□ 0.81
SREBF1-218ENST00000578469 ABCF2Q9UG63 623 aa20.13■□□□□ 0.81
SREBF1-218ENST00000578469 DOCK2Q92608 1830 aa20.13■□□□□ 0.81
SREBF1-218ENST00000578469 WTIPA6NIX2 430 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-218ENST00000578469 TMEM88BA6NKF7 163 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 IGSF3O75054 1194 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 CPA1P15085 419 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 NUCB2P80303 420 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 TMED8Q6PL24 325 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-218ENST00000578469 ZNF804AQ7Z570 1209 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 PRDM10Q9NQV6 1147 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 SH2B1Q9NRF2 756 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-218ENST00000578469 HACL1Q9UJ83 578 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 GGA1Q9UJY5 639 aa20.12■□□□□ 0.81
SREBF1-218ENST00000578469 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-218ENST00000578469 FOXN1O15353 648 aa20.11■□□□□ 0.81
SREBF1-218ENST00000578469 GNAT2P19087 354 aa20.11■□□□□ 0.81
SREBF1-218ENST00000578469 KLRK1P26718 216 aa20.11■□□□□ 0.81
SREBF1-218ENST00000578469 CTCFP49711 727 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-218ENST00000578469 GPSM2P81274 684 aa20.11■□□□□ 0.81
SREBF1-218ENST00000578469 SP8Q8IXZ3 490 aa20.11■□□□□ 0.81
SREBF1-218ENST00000578469 RTKN2Q8IZC4 609 aa20.11■□□□□ 0.81
SREBF1-218ENST00000578469 TMX4Q9H1E5 349 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-218ENST00000578469 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
SREBF1-218ENST00000578469 FGAP02671 866 aa20.1■□□□□ 0.81
SREBF1-218ENST00000578469 APPP05067 770 aa20.1■□□□□ 0.81
SREBF1-218ENST00000578469 CYP7A1P22680 504 aa20.1■□□□□ 0.81
SREBF1-218ENST00000578469 SPTY2D1Q68D10 685 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-218ENST00000578469 ZGPATQ8N5A5 531 aaKnown RBP20.1■□□□□ 0.81
SREBF1-218ENST00000578469 STRBPQ96SI9 672 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms