RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 SCN7AQ01118 1682 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 ATRNO75882 1429 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 FGFR2P21802 821 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 ARID4AP29374 1257 aaPredicted RBP13.37□□□□□ -0.27
GGA3-205ENST00000578348 MCAMP43121 646 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 CTNNA3Q9UI47 895 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 SPATA31A6Q5VVP1 1343 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 CLEC4GQ6UXB4 293 aa13.37□□□□□ -0.27
GGA3-205ENST00000578348 DHX32Q7L7V1 743 aaKnown RBP13.37□□□□□ -0.27
GGA3-205ENST00000578348 FTOQ9C0B1 505 aaKnown RBP eCLIP13.37□□□□□ -0.27
GGA3-205ENST00000578348 PPFIA3O75145 1194 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 SLC5A1P13866 664 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 APOBRQ0VD83 1088 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
GGA3-205ENST00000578348 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
GGA3-205ENST00000578348 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 C16orf45Q96MC5 204 aaPredicted RBP13.36□□□□□ -0.27
GGA3-205ENST00000578348 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
GGA3-205ENST00000578348 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
GGA3-205ENST00000578348 PFKFB2O60825 505 aa13.35□□□□□ -0.27
GGA3-205ENST00000578348 PI16Q6UXB8 463 aa13.35□□□□□ -0.27
GGA3-205ENST00000578348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.35□□□□□ -0.27
GGA3-205ENST00000578348 NSUN7Q8NE18 718 aaKnown RBP13.35□□□□□ -0.27
GGA3-205ENST00000578348 BTAF1O14981 1849 aa13.35□□□□□ -0.27
GGA3-205ENST00000578348 E7EWF7 191 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 ADD2P35612 726 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 IGHMBP2P38935 993 aaKnown RBP13.34□□□□□ -0.27
GGA3-205ENST00000578348 PHKA1P46020 1223 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
GGA3-205ENST00000578348 LLPHQ9BRT6 129 aaKnown RBP13.34□□□□□ -0.27
GGA3-205ENST00000578348 AGXT2Q9BYV1 514 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 A0A0G2JLW4 131 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 GOLGA6L19H0YKK7 550 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 CTDNEP1O95476 244 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 ADD1P35611 737 aaKnown RBP13.34□□□□□ -0.27
GGA3-205ENST00000578348 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
GGA3-205ENST00000578348 C11orf57Q6ZUT1 292 aaPredicted RBP13.34□□□□□ -0.27
GGA3-205ENST00000578348 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
GGA3-205ENST00000578348 SEC31BQ9NQW1 1179 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 DOCK2Q92608 1830 aa13.34□□□□□ -0.27
GGA3-205ENST00000578348 FOXP2O15409 715 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
GGA3-205ENST00000578348 CCDC144BQ3MJ40 725 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
GGA3-205ENST00000578348 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
GGA3-205ENST00000578348 CHST3Q7LGC8 479 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 GOLPH3LQ9H4A5 285 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 PIH1D3Q9NQM4 214 aaKnown RBP13.33□□□□□ -0.28
GGA3-205ENST00000578348 USP21Q9UK80 565 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 GPAA1O43292 621 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 GUCY1B3Q02153 619 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.28
GGA3-205ENST00000578348 CACTINQ8WUQ7 758 aaKnown RBP13.33□□□□□ -0.28
GGA3-205ENST00000578348 USP28Q96RU2 1077 aa13.33□□□□□ -0.28
GGA3-205ENST00000578348 PUS7LQ9H0K6 701 aaKnown RBP13.33□□□□□ -0.28
GGA3-205ENST00000578348 A0A087WWV3 80 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 CAVIN2O95810 425 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 IQCB1Q15051 598 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 FBXL16Q8N461 479 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 CDC5LQ99459 802 aaKnown RBP13.32□□□□□ -0.28
GGA3-205ENST00000578348 RCOR1Q9UKL0 485 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 COL24A1Q17RW2 1714 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 A0A1B0GUL6 1792 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 CASZ1Q86V15 1759 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 CBX1P83916 185 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 STX1AQ16623 288 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 SLC9C2Q5TAH2 1124 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
GGA3-205ENST00000578348 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
GGA3-205ENST00000578348 KINO60870 393 aaKnown RBP13.31□□□□□ -0.28
GGA3-205ENST00000578348 TNNT1P13805 278 aa13.31□□□□□ -0.28
GGA3-205ENST00000578348 ME1P48163 572 aa13.31□□□□□ -0.28
GGA3-205ENST00000578348 SPATA5Q8NB90 893 aa13.31□□□□□ -0.28
GGA3-205ENST00000578348 MYO5AQ9Y4I1 1855 aaKnown RBP13.31□□□□□ -0.28
GGA3-205ENST00000578348 BECN2A8MW95 431 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 CTAGE5O15320 804 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 IDH1O75874 414 aaKnown RBP13.3□□□□□ -0.28
GGA3-205ENST00000578348 FGAP02671 866 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 PDE6AP16499 860 aa13.3□□□□□ -0.28
GGA3-205ENST00000578348 SNW1Q13573 536 aaKnown RBP13.3□□□□□ -0.28
GGA3-205ENST00000578348 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
GGA3-205ENST00000578348 TPD52L1Q16890 204 aaPredicted RBP13.3□□□□□ -0.28
GGA3-205ENST00000578348 ERCC4Q92889 916 aaPredicted RBP13.3□□□□□ -0.28
GGA3-205ENST00000578348 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
GGA3-205ENST00000578348 CDC25BP30305 580 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms