RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 IQCA1LA6NCM1 817 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 FAM177BA6PVY3 158 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 GNAT3A8MTJ3 354 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 ADAM23O75077 832 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 AVPP01185 164 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 IARSP41252 1262 aaKnown RBP5.32□□□□□ -1.56
PTPRM-206ENST00000578093 RPIAP49247 311 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 PTK2Q05397 1052 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 TEFQ10587 303 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 CNGB1Q14028 1251 aaPredicted RBP5.32□□□□□ -1.56
PTPRM-206ENST00000578093 PTCRAQ6ISU1 281 aaPredicted RBP5.32□□□□□ -1.56
PTPRM-206ENST00000578093 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
PTPRM-206ENST00000578093 PDXDC2PQ6P474 469 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 NBPF15Q8N660 670 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 ZNF592Q92610 1267 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 CNKSR1Q969H4 720 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 AIDAQ96BJ3 306 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 PHACTR3Q96KR7 559 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 FMNL2Q96PY5 1086 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 SETDB2Q96T68 719 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 HACL1Q9UJ83 578 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 USP16Q9Y5T5 823 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 DDX60Q8IY21 1712 aaKnown RBP5.31□□□□□ -1.56
PTPRM-206ENST00000578093 WDR33Q9C0J8 1336 aaKnown RBP5.31□□□□□ -1.56
PTPRM-206ENST00000578093 KLRG2A4D1S0 409 aaPredicted RBP5.31□□□□□ -1.56
PTPRM-206ENST00000578093 FZD9O00144 591 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 TRAF5O00463 557 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 U2SURPO15042 1029 aaKnown RBP5.31□□□□□ -1.56
PTPRM-206ENST00000578093 NPHP1O15259 732 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 TRAK2O60296 914 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 CD2BP2O95400 341 aaKnown RBP5.31□□□□□ -1.56
PTPRM-206ENST00000578093 IGHA1P01876 353 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 NPR1P16066 1061 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 SCNN1DP51172 638 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 HLFQ16534 295 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 SOGA3Q5TF21 947 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 CYP4F22Q6NT55 531 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 NBPF5PQ86XG9 351 aaPredicted RBP5.31□□□□□ -1.56
PTPRM-206ENST00000578093 CNTROBQ8N137 903 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 GAS2L2Q8NHY3 880 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 GPSM3Q9Y4H4 160 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 HTTP42858 3142 aa5.31□□□□□ -1.56
PTPRM-206ENST00000578093 MKI67P46013 3256 aaKnown RBP5.31□□□□□ -1.56
PTPRM-206ENST00000578093 BRCA2P51587 3418 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 UBN2Q6ZU65 1347 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 CENPFP49454 3210 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 POLR2AP24928 1970 aaKnown RBP5.3□□□□□ -1.56
PTPRM-206ENST00000578093 ZBBXA8MT70 800 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 TNFRSF10AO00220 468 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 PRKAR2BP31323 418 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 EPS15P42566 896 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 TRIM26Q12899 539 aaPredicted RBP5.3□□□□□ -1.56
PTPRM-206ENST00000578093 GRM1Q13255 1194 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 DCTN1Q14203 1278 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 AGERQ15109 404 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 DEFB115Q30KQ5 88 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 MCM10Q7L590 875 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 ZBTB33Q86T24 672 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 BPHLQ86WA6 291 aaPredicted RBP5.3□□□□□ -1.56
PTPRM-206ENST00000578093 SYNE4Q8N205 404 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 Q8N3U1 123 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 BAP1Q92560 729 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 TEX13AQ9BXU3 409 aaPredicted RBP5.3□□□□□ -1.56
PTPRM-206ENST00000578093 DDX21Q9NR30 783 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRM-206ENST00000578093 ABT1Q9ULW3 272 aaKnown RBP5.3□□□□□ -1.56
PTPRM-206ENST00000578093 NIP7Q9Y221 180 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRM-206ENST00000578093 GJA3Q9Y6H8 435 aa5.3□□□□□ -1.56
PTPRM-206ENST00000578093 CLSPNQ9HAW4 1339 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 PDE4DIPQ5VU43 2346 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 AOC2O75106 756 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 SOX11P35716 441 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 WNT7BP56706 349 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 MCCD1P59942 119 aaPredicted RBP5.29□□□□□ -1.56
PTPRM-206ENST00000578093 TRIM32Q13049 653 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 NR1H3Q13133 447 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 LINC01559Q495D7 138 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 CRY2Q49AN0 593 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 CST9Q5W186 159 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 TTLL7Q6ZT98 887 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 GPC2Q8N158 579 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 ZNF511Q8NB15 262 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 CAPNS2Q96L46 248 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 PSMD1Q99460 953 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 ARHGAP9Q9BRR9 750 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 PCGF6Q9BYE7 350 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 ZNF646O15015 1829 aaPredicted RBP5.29□□□□□ -1.56
PTPRM-206ENST00000578093 SCN9AQ15858 1988 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 IBTKQ9P2D0 1353 aaPredicted RBP5.29□□□□□ -1.56
PTPRM-206ENST00000578093 NPC1L1Q9UHC9 1359 aa5.29□□□□□ -1.56
PTPRM-206ENST00000578093 PSME4Q14997 1843 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 SHTN1A0MZ66 631 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 CCDC85CA6NKD9 419 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 TCERG1O14776 1098 aaKnown RBP5.28□□□□□ -1.56
PTPRM-206ENST00000578093 GPTP24298 496 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 MAP2K1Q02750 393 aaPredicted RBP5.28□□□□□ -1.56
PTPRM-206ENST00000578093 IRF5Q13568 498 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 GPAT2Q6NUI2 795 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 CLEC4GQ6UXB4 293 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 DLK2Q6UY11 383 aa5.28□□□□□ -1.56
PTPRM-206ENST00000578093 PNMA8AQ86V59 439 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms