RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 HSP90AB4PQ58FF6 505 aa27.33■■□□□ 1.97
SMARCD2-206ENST00000577990 ERC1Q8IUD2 1116 aa27.33■■□□□ 1.97
SMARCD2-206ENST00000577990 GRIK5Q16478 980 aa27.32■■□□□ 1.96
SMARCD2-206ENST00000577990 GORABQ5T7V8 394 aa27.32■■□□□ 1.96
SMARCD2-206ENST00000577990 SUGT1Q9Y2Z0 365 aa27.32■■□□□ 1.96
SMARCD2-206ENST00000577990 AOC2O75106 756 aa27.31■■□□□ 1.96
SMARCD2-206ENST00000577990 ECE1P42892 770 aa27.31■■□□□ 1.96
SMARCD2-206ENST00000577990 SERPINA10Q9UK55 444 aa27.31■■□□□ 1.96
SMARCD2-206ENST00000577990 SPDYE2BA6NHP3 402 aa27.3■■□□□ 1.96
SMARCD2-206ENST00000577990 SPDYE6P0CI01 402 aa27.3■■□□□ 1.96
SMARCD2-206ENST00000577990 RBM5P52756 815 aaKnown RBP eCLIP27.3■■□□□ 1.96
SMARCD2-206ENST00000577990 RASGRF1Q13972 1273 aa27.3■■□□□ 1.96
SMARCD2-206ENST00000577990 PCDHAC2Q9Y5I4 1007 aa27.3■■□□□ 1.96
SMARCD2-206ENST00000577990 ECM29Q5VYK3 1845 aa27.3■■□□□ 1.96
SMARCD2-206ENST00000577990 MAST3O60307 1309 aa27.29■■□□□ 1.96
SMARCD2-206ENST00000577990 PDS5AQ29RF7 1337 aaKnown RBP27.29■■□□□ 1.96
SMARCD2-206ENST00000577990 SALL1Q9NSC2 1324 aa27.28■■□□□ 1.96
SMARCD2-206ENST00000577990 CRKP46108 304 aa27.28■■□□□ 1.96
SMARCD2-206ENST00000577990 CTCFP49711 727 aaPredicted RBP27.28■■□□□ 1.96
SMARCD2-206ENST00000577990 HDLBPQ00341 1268 aaKnown RBP27.28■■□□□ 1.96
SMARCD2-206ENST00000577990 DBNDD2Q9BQY9 259 aa27.28■■□□□ 1.96
SMARCD2-206ENST00000577990 MYO1BO43795 1136 aa27.27■■□□□ 1.96
SMARCD2-206ENST00000577990 ARID4AP29374 1257 aaPredicted RBP27.27■■□□□ 1.96
SMARCD2-206ENST00000577990 MAP2K1Q02750 393 aaPredicted RBP27.27■■□□□ 1.96
SMARCD2-206ENST00000577990 APOBEC3FQ8IUX4 373 aaKnown RBP27.27■■□□□ 1.96
SMARCD2-206ENST00000577990 PRMT6Q96LA8 375 aaPredicted RBP27.27■■□□□ 1.96
SMARCD2-206ENST00000577990 CRBNQ96SW2 442 aa27.27■■□□□ 1.96
SMARCD2-206ENST00000577990 UQCRFS1P1P0C7P4 283 aa27.26■■□□□ 1.95
SMARCD2-206ENST00000577990 LBX1P52954 281 aa27.26■■□□□ 1.95
SMARCD2-206ENST00000577990 HUNKP57058 714 aa27.26■■□□□ 1.95
SMARCD2-206ENST00000577990 ZGPATQ8N5A5 531 aaKnown RBP27.26■■□□□ 1.95
SMARCD2-206ENST00000577990 RHPN1Q8TCX5 695 aa27.26■■□□□ 1.95
SMARCD2-206ENST00000577990 EAF2Q96CJ1 260 aaPredicted RBP27.26■■□□□ 1.95
SMARCD2-206ENST00000577990 SCAF8Q9UPN6 1271 aaKnown RBP27.26■■□□□ 1.95
SMARCD2-206ENST00000577990 CAPN15O75808 1086 aa27.25■■□□□ 1.95
SMARCD2-206ENST00000577990 TEKT1Q969V4 418 aa27.25■■□□□ 1.95
SMARCD2-206ENST00000577990 KIF1BPQ96EK5 621 aa27.25■■□□□ 1.95
SMARCD2-206ENST00000577990 CDCA5Q96FF9 252 aa27.25■■□□□ 1.95
SMARCD2-206ENST00000577990 MRIQ9BWK5 157 aa27.25■■□□□ 1.95
SMARCD2-206ENST00000577990 DBNLQ9UJU6 430 aaKnown RBP27.25■■□□□ 1.95
SMARCD2-206ENST00000577990 AOX1Q06278 1338 aa27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 RAB11FIP3O75154 756 aa27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 PRDX5P30044 214 aa27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 CCDC158Q5M9N0 1113 aa27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 TTC39AQ5SRH9 613 aa27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 HHIPL1Q96JK4 782 aa27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 CCDC8Q9H0W5 538 aaPredicted RBP27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 GBA2Q9HCG7 927 aaPredicted RBP27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 HMG20BQ9P0W2 317 aa27.24■■□□□ 1.95
SMARCD2-206ENST00000577990 CLRN2A0PK11 232 aa27.23■■□□□ 1.95
SMARCD2-206ENST00000577990 APBB1O00213 710 aa27.23■■□□□ 1.95
SMARCD2-206ENST00000577990 LDHBP07195 334 aaKnown RBP27.23■■□□□ 1.95
SMARCD2-206ENST00000577990 HSPA8P11142 646 aaKnown RBP27.23■■□□□ 1.95
SMARCD2-206ENST00000577990 SPATA5Q8NB90 893 aa27.23■■□□□ 1.95
SMARCD2-206ENST00000577990 IL1RAPL2Q9NP60 686 aa27.23■■□□□ 1.95
SMARCD2-206ENST00000577990 TLR7Q9NYK1 1049 aaKnown RBP27.23■■□□□ 1.95
SMARCD2-206ENST00000577990 AACSQ86V21 672 aa27.22■■□□□ 1.95
SMARCD2-206ENST00000577990 PRDM10Q9NQV6 1147 aa27.22■■□□□ 1.95
SMARCD2-206ENST00000577990 MCAMP43121 646 aa27.21■■□□□ 1.95
SMARCD2-206ENST00000577990 SPDYE2Q495Y8 402 aa27.21■■□□□ 1.95
SMARCD2-206ENST00000577990 HHIPL2Q6UWX4 724 aa27.21■■□□□ 1.95
SMARCD2-206ENST00000577990 PI16Q6UXB8 463 aa27.21■■□□□ 1.95
SMARCD2-206ENST00000577990 C2orf69Q8N8R5 385 aa27.21■■□□□ 1.95
SMARCD2-206ENST00000577990 ZDHHC15Q96MV8 337 aa27.21■■□□□ 1.95
SMARCD2-206ENST00000577990 VEZTQ9HBM0 779 aa27.21■■□□□ 1.95
SMARCD2-206ENST00000577990 MAP2K2P36507 400 aa27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 SPTY2D1Q68D10 685 aaPredicted RBP27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 CLASRPQ8N2M8 674 aaKnown RBP27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 ZNF512BQ96KM6 892 aaPredicted RBP27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 ZIC5Q96T25 663 aa27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 TDRD3Q9H7E2 651 aaKnown RBP27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 ZNF70Q9UC06 446 aaPredicted RBP27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 ABCF2Q9UG63 623 aa27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 TSKSQ9UJT2 592 aa27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 PCDHB15Q9Y5E8 787 aa27.2■■□□□ 1.94
SMARCD2-206ENST00000577990 BEGAINQ9BUH8 593 aa27.19■■□□□ 1.94
SMARCD2-206ENST00000577990 AKAP11Q9UKA4 1901 aa27.18■■□□□ 1.94
SMARCD2-206ENST00000577990 DIXDC1Q155Q3 683 aa27.18■■□□□ 1.94
SMARCD2-206ENST00000577990 PRAMEF18Q5VWM3 479 aa27.18■■□□□ 1.94
SMARCD2-206ENST00000577990 DEFB129Q9H1M3 183 aa27.18■■□□□ 1.94
SMARCD2-206ENST00000577990 SUPT16HQ9Y5B9 1047 aaKnown RBP27.18■■□□□ 1.94
SMARCD2-206ENST00000577990 APOBEC3HQ6NTF7 200 aaKnown RBP27.17■■□□□ 1.94
SMARCD2-206ENST00000577990 ERICH6Q7L0X2 663 aa27.17■■□□□ 1.94
SMARCD2-206ENST00000577990 DZIP1Q86YF9 867 aaKnown RBP27.17■■□□□ 1.94
SMARCD2-206ENST00000577990 DAGLAQ9Y4D2 1042 aa27.17■■□□□ 1.94
SMARCD2-206ENST00000577990 PPP2R3BQ9Y5P8 575 aa27.17■■□□□ 1.94
SMARCD2-206ENST00000577990 PAPPA2Q9BXP8 1791 aa27.17■■□□□ 1.94
SMARCD2-206ENST00000577990 TNFAIP1Q13829 316 aa27.16■■□□□ 1.94
SMARCD2-206ENST00000577990 RGMBQ6NW40 437 aa27.16■■□□□ 1.94
SMARCD2-206ENST00000577990 DCTPP1Q9H773 170 aa27.16■■□□□ 1.94
SMARCD2-206ENST00000577990 SNRKQ9NRH2 765 aa27.16■■□□□ 1.94
SMARCD2-206ENST00000577990 IFIT2P09913 472 aaKnown RBP27.15■■□□□ 1.94
SMARCD2-206ENST00000577990 TBC1D9Q6ZT07 1266 aa27.15■■□□□ 1.94
SMARCD2-206ENST00000577990 LRRCC1Q9C099 1032 aa27.15■■□□□ 1.94
SMARCD2-206ENST00000577990 MYH2Q9UKX2 1941 aa27.15■■□□□ 1.94
SMARCD2-206ENST00000577990 NF2P35240 595 aa27.14■■□□□ 1.94
SMARCD2-206ENST00000577990 ZNF157P51786 506 aaPredicted RBP27.14■■□□□ 1.94
SMARCD2-206ENST00000577990 NOGQ13253 232 aa27.14■■□□□ 1.94
SMARCD2-206ENST00000577990 SLF2Q8IX21 1173 aa27.14■■□□□ 1.94
SMARCD2-206ENST00000577990 TMOD2Q9NZR1 351 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms