RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SPDYE2Q495Y8 402 aa20.05■□□□□ 0.8
VAPA-204ENST00000577901 ANKRD13AQ8IZ07 590 aa20.05■□□□□ 0.8
VAPA-204ENST00000577901 SERPINA10Q9UK55 444 aa20.05■□□□□ 0.8
VAPA-204ENST00000577901 TTF2Q9UNY4 1162 aaKnown RBP20.05■□□□□ 0.8
VAPA-204ENST00000577901 TRIM17Q9Y577 477 aa20.05■□□□□ 0.8
VAPA-204ENST00000577901 HTTP42858 3142 aa20.05■□□□□ 0.8
VAPA-204ENST00000577901 BCAR3O75815 825 aa20.04■□□□□ 0.8
VAPA-204ENST00000577901 GJA5P36382 358 aa20.04■□□□□ 0.8
VAPA-204ENST00000577901 TNFAIP1Q13829 316 aa20.04■□□□□ 0.8
VAPA-204ENST00000577901 FRAT1Q92837 279 aaPredicted RBP20.04■□□□□ 0.8
VAPA-204ENST00000577901 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
VAPA-204ENST00000577901 FAM84BQ96KN1 310 aaPredicted RBP20.04■□□□□ 0.8
VAPA-204ENST00000577901 PUS3Q9BZE2 481 aaKnown RBP20.04■□□□□ 0.8
VAPA-204ENST00000577901 TDRD3Q9H7E2 651 aaKnown RBP20.04■□□□□ 0.8
VAPA-204ENST00000577901 ZNF70Q9UC06 446 aaPredicted RBP20.04■□□□□ 0.8
VAPA-204ENST00000577901 PDE4DIPQ5VU43 2346 aa20.03■□□□□ 0.8
VAPA-204ENST00000577901 OTUD7BQ6GQQ9 843 aa20.03■□□□□ 0.8
VAPA-204ENST00000577901 KAZALD1Q96I82 304 aa20.03■□□□□ 0.8
VAPA-204ENST00000577901 USP44Q9H0E7 712 aa20.03■□□□□ 0.8
VAPA-204ENST00000577901 CRHR2Q13324 411 aa20.02■□□□□ 0.8
VAPA-204ENST00000577901 OTOP1Q7RTM1 612 aa20.02■□□□□ 0.8
VAPA-204ENST00000577901 DZIP1LQ8IYY4 767 aaKnown RBP20.02■□□□□ 0.8
VAPA-204ENST00000577901 HDAC5Q9UQL6 1122 aa20.02■□□□□ 0.8
VAPA-204ENST00000577901 LAMB1P07942 1786 aa20.02■□□□□ 0.8
VAPA-204ENST00000577901 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.79
VAPA-204ENST00000577901 ATF7IPQ6VMQ6 1270 aa20.01■□□□□ 0.79
VAPA-204ENST00000577901 OPTNQ96CV9 577 aa20.01■□□□□ 0.79
VAPA-204ENST00000577901 ERO1AQ96HE7 468 aa20.01■□□□□ 0.79
VAPA-204ENST00000577901 PTPN18Q99952 460 aa20.01■□□□□ 0.79
VAPA-204ENST00000577901 ELP3Q9H9T3 547 aa20.01■□□□□ 0.79
VAPA-204ENST00000577901 RIPOR2Q9Y4F9 1068 aa20.01■□□□□ 0.79
VAPA-204ENST00000577901 TESPA1A2RU30 521 aaPredicted RBP20■□□□□ 0.79
VAPA-204ENST00000577901 CRKP46108 304 aa20■□□□□ 0.79
VAPA-204ENST00000577901 TEPSINQ96N21 525 aa20■□□□□ 0.79
VAPA-204ENST00000577901 CENPFP49454 3210 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 TCP10L2B9ZVM9 353 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 ZKSCAN2Q63HK3 967 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 INTS3Q68E01 1043 aaKnown RBP19.99■□□□□ 0.79
VAPA-204ENST00000577901 FBXO33Q7Z6M2 555 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 VPS37DQ86XT2 251 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 CDAN1Q8IWY9 1227 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 CD99L2Q8TCZ2 262 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 BICC1Q9H694 974 aaKnown RBP19.99■□□□□ 0.79
VAPA-204ENST00000577901 PCDH10Q9P2E7 1040 aa19.99■□□□□ 0.79
VAPA-204ENST00000577901 UBTFL1P0CB47 393 aaPredicted RBP19.98■□□□□ 0.79
VAPA-204ENST00000577901 TRIM27P14373 513 aa19.98■□□□□ 0.79
VAPA-204ENST00000577901 TNNI2P48788 182 aa19.98■□□□□ 0.79
VAPA-204ENST00000577901 GRIK5Q16478 980 aa19.98■□□□□ 0.79
VAPA-204ENST00000577901 RABL6Q3YEC7 729 aaPredicted RBP19.98■□□□□ 0.79
VAPA-204ENST00000577901 TMEM39BQ9GZU3 492 aa19.98■□□□□ 0.79
VAPA-204ENST00000577901 IQSEC3Q9UPP2 1182 aaPredicted RBP19.98■□□□□ 0.79
VAPA-204ENST00000577901 PTPN22Q9Y2R2 807 aa19.98■□□□□ 0.79
VAPA-204ENST00000577901 ARAP2Q8WZ64 1704 aa19.98■□□□□ 0.79
VAPA-204ENST00000577901 SP3Q02447 781 aa19.97■□□□□ 0.79
VAPA-204ENST00000577901 CHAF1AQ13111 956 aaPredicted RBP19.97■□□□□ 0.79
VAPA-204ENST00000577901 LRRC24Q50LG9 513 aa19.97■□□□□ 0.79
VAPA-204ENST00000577901 CAVIN4Q5BKX8 364 aa19.97■□□□□ 0.79
VAPA-204ENST00000577901 METTL24Q5JXM2 366 aa19.97■□□□□ 0.79
VAPA-204ENST00000577901 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.97■□□□□ 0.79
VAPA-204ENST00000577901 MS4A4AQ96JQ5 239 aa19.97■□□□□ 0.79
VAPA-204ENST00000577901 OTOFQ9HC10 1997 aa19.97■□□□□ 0.79
VAPA-204ENST00000577901 FRAT2O75474 233 aaPredicted RBP19.96■□□□□ 0.79
VAPA-204ENST00000577901 MAP3K9P80192 1104 aa19.96■□□□□ 0.79
VAPA-204ENST00000577901 VGLL4Q14135 290 aa19.96■□□□□ 0.79
VAPA-204ENST00000577901 ANKRD44Q8N8A2 993 aa19.96■□□□□ 0.79
VAPA-204ENST00000577901 TBC1D22AQ8WUA7 517 aa19.96■□□□□ 0.79
VAPA-204ENST00000577901 CNKSR2Q8WXI2 1034 aa19.96■□□□□ 0.79
VAPA-204ENST00000577901 EFCC1Q9HA90 598 aa19.96■□□□□ 0.79
VAPA-204ENST00000577901 POTEFA5A3E0 1075 aa19.95■□□□□ 0.78
VAPA-204ENST00000577901 PDE8BO95263 885 aa19.95■□□□□ 0.78
VAPA-204ENST00000577901 HDLBPQ00341 1268 aaKnown RBP19.95■□□□□ 0.78
VAPA-204ENST00000577901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.95■□□□□ 0.78
VAPA-204ENST00000577901 CLUAP1Q96AJ1 413 aa19.95■□□□□ 0.78
VAPA-204ENST00000577901 CSADQ9Y600 493 aa19.95■□□□□ 0.78
VAPA-204ENST00000577901 MKI67P46013 3256 aaKnown RBP19.95■□□□□ 0.78
VAPA-204ENST00000577901 GNAI3P08754 354 aa19.94■□□□□ 0.78
VAPA-204ENST00000577901 VGLL2Q8N8G2 317 aa19.94■□□□□ 0.78
VAPA-204ENST00000577901 BRI3BPQ8WY22 251 aa19.94■□□□□ 0.78
VAPA-204ENST00000577901 TEKT1Q969V4 418 aa19.94■□□□□ 0.78
VAPA-204ENST00000577901 BRCA2P51587 3418 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 CCL15-CCL14A0A0B4J2E2 113 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 BCAMP50895 628 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 GTF2A2P52657 109 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 CACNB3P54284 484 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 CAP1Q01518 475 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 CCL15Q16663 113 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 KLHDC4Q8TBB5 520 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 OTUD5Q96G74 571 aa19.93■□□□□ 0.78
VAPA-204ENST00000577901 FTSJ3Q8IY81 847 aaKnown RBP19.92■□□□□ 0.78
VAPA-204ENST00000577901 ARMC5Q96C12 935 aa19.92■□□□□ 0.78
VAPA-204ENST00000577901 ZDHHC15Q96MV8 337 aa19.92■□□□□ 0.78
VAPA-204ENST00000577901 MEIS3Q99687 375 aa19.92■□□□□ 0.78
VAPA-204ENST00000577901 ZFYVE28Q9HCC9 887 aa19.92■□□□□ 0.78
VAPA-204ENST00000577901 TAF1CQ15572 869 aaPredicted RBP19.91■□□□□ 0.78
VAPA-204ENST00000577901 PPP4R3CPQ6ZMV5 832 aa19.91■□□□□ 0.78
VAPA-204ENST00000577901 MRIQ9BWK5 157 aa19.91■□□□□ 0.78
VAPA-204ENST00000577901 TMOD2Q9NZR1 351 aa19.91■□□□□ 0.78
VAPA-204ENST00000577901 TNNQ9UQP3 1299 aa19.91■□□□□ 0.78
VAPA-204ENST00000577901 LRRFIP2Q9Y608 721 aaKnown RBP19.91■□□□□ 0.78
VAPA-204ENST00000577901 SPDYE5A6NIY4 337 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms