RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 GYG1P46976 350 aa16.29■□□□□ 0.2
RNF43-202ENST00000577625 CBX1P83916 185 aa16.29■□□□□ 0.2
RNF43-202ENST00000577625 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
RNF43-202ENST00000577625 ZNF532Q9HCE3 1301 aa16.29■□□□□ 0.2
RNF43-202ENST00000577625 GTF2F1P35269 517 aaKnown RBP eCLIP16.28■□□□□ 0.25e-8■■■■□ 25.1
RNF43-202ENST00000577625 ANKRD1Q15327 319 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 STOX1Q6ZVD7 989 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 RBSNQ9H1K0 784 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
RNF43-202ENST00000577625 BAG4O95429 457 aaKnown RBP16.28■□□□□ 0.2
RNF43-202ENST00000577625 HMGN5P82970 282 aaKnown RBP16.28■□□□□ 0.2
RNF43-202ENST00000577625 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 POTEAQ6S8J7 498 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 ANKRD2Q9GZV1 360 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 TFCP2L1Q9NZI6 479 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
RNF43-202ENST00000577625 CHD4Q14839 1912 aa16.28■□□□□ 0.2
RNF43-202ENST00000577625 ST5P78524 1137 aa16.27■□□□□ 0.2
RNF43-202ENST00000577625 GRAPQ13588 217 aa16.27■□□□□ 0.2
RNF43-202ENST00000577625 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
RNF43-202ENST00000577625 GRAPLQ8TC17 118 aaPredicted RBP16.27■□□□□ 0.2
RNF43-202ENST00000577625 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.2
RNF43-202ENST00000577625 IQSEC3Q9UPP2 1182 aaPredicted RBP16.27■□□□□ 0.2
RNF43-202ENST00000577625 CACNA1SQ13698 1873 aa16.27■□□□□ 0.2
RNF43-202ENST00000577625 BRD1O95696 1058 aa16.27■□□□□ 0.19
RNF43-202ENST00000577625 KLRK1P26718 216 aa16.27■□□□□ 0.19
RNF43-202ENST00000577625 MAP3K12Q12852 859 aa16.27■□□□□ 0.19
RNF43-202ENST00000577625 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.19
RNF43-202ENST00000577625 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.19
RNF43-202ENST00000577625 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
RNF43-202ENST00000577625 TTLL5Q6EMB2 1281 aa16.26■□□□□ 0.19
RNF43-202ENST00000577625 COL23A1Q86Y22 540 aaPredicted RBP16.26■□□□□ 0.19
RNF43-202ENST00000577625 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
RNF43-202ENST00000577625 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
RNF43-202ENST00000577625 CAVIN4Q5BKX8 364 aa16.26■□□□□ 0.19
RNF43-202ENST00000577625 FBXO33Q7Z6M2 555 aa16.26■□□□□ 0.19
RNF43-202ENST00000577625 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
RNF43-202ENST00000577625 MAGEB6Q8N7X4 407 aa16.26■□□□□ 0.19
RNF43-202ENST00000577625 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
RNF43-202ENST00000577625 TPCN1Q9ULQ1 816 aa16.26■□□□□ 0.19
RNF43-202ENST00000577625 IRS2Q9Y4H2 1338 aa16.25■□□□□ 0.19
RNF43-202ENST00000577625 FGAP02671 866 aa16.25■□□□□ 0.19
RNF43-202ENST00000577625 ME3Q16798 604 aa16.25■□□□□ 0.19
RNF43-202ENST00000577625 CTNNA3Q9UI47 895 aa16.25■□□□□ 0.19
RNF43-202ENST00000577625 LRRC37AA6NMS7 1700 aa16.24■□□□□ 0.19
RNF43-202ENST00000577625 E7EWF7 191 aa16.24■□□□□ 0.19
RNF43-202ENST00000577625 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
RNF43-202ENST00000577625 CCDC88AQ3V6T2 1871 aa16.24■□□□□ 0.19
RNF43-202ENST00000577625 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
RNF43-202ENST00000577625 RPGRQ92834 1020 aaKnown RBP16.24■□□□□ 0.19
RNF43-202ENST00000577625 VPS37DQ86XT2 251 aa16.24■□□□□ 0.19
RNF43-202ENST00000577625 CCDC83Q8IWF9 413 aa16.24■□□□□ 0.19
RNF43-202ENST00000577625 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
RNF43-202ENST00000577625 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
RNF43-202ENST00000577625 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
RNF43-202ENST00000577625 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
RNF43-202ENST00000577625 LRP2BPQ9P2M1 347 aa16.23■□□□□ 0.19
RNF43-202ENST00000577625 DENND2AQ9ULE3 1009 aa16.23■□□□□ 0.19
RNF43-202ENST00000577625 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
RNF43-202ENST00000577625 KLRG2A4D1S0 409 aaPredicted RBP16.22■□□□□ 0.19
RNF43-202ENST00000577625 SEMA3EO15041 775 aa16.22■□□□□ 0.19
RNF43-202ENST00000577625 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
RNF43-202ENST00000577625 DHX32Q7L7V1 743 aaKnown RBP16.22■□□□□ 0.19
RNF43-202ENST00000577625 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
RNF43-202ENST00000577625 PDS5AQ29RF7 1337 aaKnown RBP16.22■□□□□ 0.19
RNF43-202ENST00000577625 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
RNF43-202ENST00000577625 WDR33Q9C0J8 1336 aaKnown RBP16.22■□□□□ 0.19
RNF43-202ENST00000577625 MBD4O95243 580 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 HAND2P61296 217 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 Q6ZUG5 572 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 TXNRD3Q86VQ6 643 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 NLGN1Q8N2Q7 840 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 FLAD1Q8NFF5 587 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 QSER1Q2KHR3 1735 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 XDHP47989 1333 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 KIAA1551Q9HCM1 1747 aa16.21■□□□□ 0.19
RNF43-202ENST00000577625 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
RNF43-202ENST00000577625 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
RNF43-202ENST00000577625 EXOSC10Q01780 885 aaKnown RBP16.21■□□□□ 0.19
RNF43-202ENST00000577625 RBM17Q96I25 401 aaKnown RBP16.21■□□□□ 0.19
RNF43-202ENST00000577625 DNTTIP2Q5QJE6 756 aaKnown RBP16.2■□□□□ 0.18
RNF43-202ENST00000577625 MCTP1Q6DN14 999 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 ABCF2Q9UG63 623 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 LEMD3Q9Y2U8 911 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 TCHHQ07283 1943 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 ZMYM6O95789 1325 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 ZBTB22O15209 634 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 LRRC2Q9BYS8 371 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 ARMT1Q9H993 441 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
RNF43-202ENST00000577625 GJB2P29033 226 aa16.19■□□□□ 0.18
RNF43-202ENST00000577625 ADGRA1Q86SQ6 560 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms