RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 C3orf80F5H4A9 247 aa8.83□□□□□ -1
CASC3-205ENST00000577605 H7C1D1 291 aa8.83□□□□□ -1
CASC3-205ENST00000577605 SMAPO00193 183 aa8.83□□□□□ -1
CASC3-205ENST00000577605 ECE2O60344 883 aa8.83□□□□□ -1
CASC3-205ENST00000577605 BCAMP50895 628 aa8.83□□□□□ -1
CASC3-205ENST00000577605 FAM161AQ3B820 660 aa8.83□□□□□ -1
CASC3-205ENST00000577605 RABL6Q3YEC7 729 aaPredicted RBP8.83□□□□□ -1
CASC3-205ENST00000577605 PADI6Q6TGC4 694 aa8.83□□□□□ -1
CASC3-205ENST00000577605 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
CASC3-205ENST00000577605 C15orf52Q6ZUT6 534 aaKnown RBP8.83□□□□□ -1
CASC3-205ENST00000577605 AGBL3Q8NEM8 1001 aa8.83□□□□□ -1
CASC3-205ENST00000577605 CCDC85AQ96PX6 553 aaPredicted RBP8.83□□□□□ -1
CASC3-205ENST00000577605 BCL2L13Q9BXK5 485 aa8.83□□□□□ -1
CASC3-205ENST00000577605 GPRC5DQ9NZD1 345 aa8.83□□□□□ -1
CASC3-205ENST00000577605 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
CASC3-205ENST00000577605 CHMP3Q9Y3E7 222 aa8.83□□□□□ -1
CASC3-205ENST00000577605 LAMB2P55268 1798 aa8.83□□□□□ -1
CASC3-205ENST00000577605 MED23Q9ULK4 1368 aa8.83□□□□□ -1
CASC3-205ENST00000577605 DDX60Q8IY21 1712 aaKnown RBP8.83□□□□□ -1
CASC3-205ENST00000577605 ZNF804BA4D1E1 1349 aa8.82□□□□□ -1
CASC3-205ENST00000577605 RAD21O60216 631 aa8.82□□□□□ -1
CASC3-205ENST00000577605 GNAI3P08754 354 aa8.82□□□□□ -1
CASC3-205ENST00000577605 VIL1P09327 827 aaKnown RBP8.82□□□□□ -1
CASC3-205ENST00000577605 NBPF7P0C2Y1 421 aaPredicted RBP8.82□□□□□ -1
CASC3-205ENST00000577605 KCNJ4P48050 445 aa8.82□□□□□ -1
CASC3-205ENST00000577605 SCNN1DP51172 638 aa8.82□□□□□ -1
CASC3-205ENST00000577605 INTS3Q68E01 1043 aaKnown RBP8.82□□□□□ -1
CASC3-205ENST00000577605 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
CASC3-205ENST00000577605 USP44Q9H0E7 712 aa8.82□□□□□ -1
CASC3-205ENST00000577605 CACNA1FO60840 1977 aa8.82□□□□□ -1
CASC3-205ENST00000577605 TIAM2Q8IVF5 1701 aa8.82□□□□□ -1
CASC3-205ENST00000577605 MROH5Q6ZUA9 1318 aa8.81□□□□□ -1
CASC3-205ENST00000577605 MYO3BQ8WXR4 1341 aa8.81□□□□□ -1
CASC3-205ENST00000577605 ZNF609O15014 1411 aa8.81□□□□□ -1
CASC3-205ENST00000577605 LRRC37AA6NMS7 1700 aa8.81□□□□□ -1
CASC3-205ENST00000577605 USP17L3A6NCW0 530 aa8.81□□□□□ -1
CASC3-205ENST00000577605 USP17L4A6NCW7 530 aa8.81□□□□□ -1
CASC3-205ENST00000577605 RAD17O75943 681 aa8.81□□□□□ -1
CASC3-205ENST00000577605 UBTFL1P0CB47 393 aaPredicted RBP8.81□□□□□ -1
CASC3-205ENST00000577605 MS4A1P11836 297 aa8.81□□□□□ -1
CASC3-205ENST00000577605 GMPSP49915 693 aaPredicted RBP8.81□□□□□ -1
CASC3-205ENST00000577605 CHRNDQ07001 517 aa8.81□□□□□ -1
CASC3-205ENST00000577605 PTGDRQ13258 359 aa8.81□□□□□ -1
CASC3-205ENST00000577605 UBE4AQ14139 1066 aa8.81□□□□□ -1
CASC3-205ENST00000577605 EAPPQ56P03 285 aaPredicted RBP8.81□□□□□ -1
CASC3-205ENST00000577605 ATF7IPQ6VMQ6 1270 aa8.81□□□□□ -1
CASC3-205ENST00000577605 USP17L1Q7RTZ2 530 aa8.81□□□□□ -1
CASC3-205ENST00000577605 TATDN2Q93075 761 aa8.81□□□□□ -1
CASC3-205ENST00000577605 SUCLG2Q96I99 432 aa8.81□□□□□ -1
CASC3-205ENST00000577605 DBNDD1Q9H9R9 158 aa8.81□□□□□ -1
CASC3-205ENST00000577605 CNNM1Q9NRU3 951 aa8.81□□□□□ -1
CASC3-205ENST00000577605 PGAP2Q9UHJ9 254 aa8.81□□□□□ -1
CASC3-205ENST00000577605 CNOT7Q9UIV1 285 aaKnown RBP8.81□□□□□ -1
CASC3-205ENST00000577605 DICER1Q9UPY3 1922 aaKnown RBP8.8□□□□□ -1
CASC3-205ENST00000577605 SOWAHBA6NEL2 793 aa8.8□□□□□ -1
CASC3-205ENST00000577605 YDJCA8MPS7 323 aa8.8□□□□□ -1
CASC3-205ENST00000577605 PSMD14O00487 310 aa8.8□□□□□ -1
CASC3-205ENST00000577605 EPS15P42566 896 aa8.8□□□□□ -1
CASC3-205ENST00000577605 STRIP1Q5VSL9 837 aa8.8□□□□□ -1
CASC3-205ENST00000577605 ZKSCAN2Q63HK3 967 aa8.8□□□□□ -1
CASC3-205ENST00000577605 ZNF804AQ7Z570 1209 aa8.8□□□□□ -1
CASC3-205ENST00000577605 CNTROBQ8N137 903 aa8.8□□□□□ -1
CASC3-205ENST00000577605 TTC13Q8NBP0 860 aa8.8□□□□□ -1
CASC3-205ENST00000577605 PNMA3Q9UL41 463 aa8.8□□□□□ -1
CASC3-205ENST00000577605 DUOX1Q9NRD9 1551 aa8.79□□□□□ -1
CASC3-205ENST00000577605 ITGBL1O95965 494 aaPredicted RBP8.79□□□□□ -1
CASC3-205ENST00000577605 FKBP1AP62942 108 aaKnown RBP8.79□□□□□ -1
CASC3-205ENST00000577605 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
CASC3-205ENST00000577605 RSBN1LQ6PCB5 846 aaPredicted RBP8.79□□□□□ -1
CASC3-205ENST00000577605 NUDT18Q6ZVK8 323 aa8.79□□□□□ -1
CASC3-205ENST00000577605 CDC37L1Q7L3B6 337 aa8.79□□□□□ -1
CASC3-205ENST00000577605 OGFOD1Q8N543 542 aa8.79□□□□□ -1
CASC3-205ENST00000577605 RGS22Q8NE09 1264 aa8.79□□□□□ -1
CASC3-205ENST00000577605 KAZALD1Q96I82 304 aa8.79□□□□□ -1
CASC3-205ENST00000577605 BICC1Q9H694 974 aaKnown RBP8.79□□□□□ -1
CASC3-205ENST00000577605 SCN4AP35499 1836 aa8.79□□□□□ -1
CASC3-205ENST00000577605 PASKQ96RG2 1323 aa8.79□□□□□ -1
CASC3-205ENST00000577605 COL4A5P29400 1685 aa8.78□□□□□ -1
CASC3-205ENST00000577605 TMEM88BA6NKF7 163 aa8.78□□□□□ -1
CASC3-205ENST00000577605 CIAO1O76071 339 aa8.78□□□□□ -1
CASC3-205ENST00000577605 USP17L8P0C7I0 530 aa8.78□□□□□ -1
CASC3-205ENST00000577605 IL1R1P14778 569 aa8.78□□□□□ -1
CASC3-205ENST00000577605 CAVIN4Q5BKX8 364 aa8.78□□□□□ -1
CASC3-205ENST00000577605 SLC51AQ86UW1 340 aa8.78□□□□□ -1
CASC3-205ENST00000577605 ANKRD44Q8N8A2 993 aa8.78□□□□□ -1
CASC3-205ENST00000577605 FRAT1Q92837 279 aaPredicted RBP8.78□□□□□ -1
CASC3-205ENST00000577605 LRCH3Q96II8 777 aa8.78□□□□□ -1
CASC3-205ENST00000577605 CHMP4BQ9H444 224 aaKnown RBP8.78□□□□□ -1
CASC3-205ENST00000577605 CD209Q9NNX6 404 aa8.78□□□□□ -1
CASC3-205ENST00000577605 PLA2G2EQ9NZK7 142 aa8.78□□□□□ -1
CASC3-205ENST00000577605 HDAC9Q9UKV0 1011 aa8.78□□□□□ -1
CASC3-205ENST00000577605 RIPOR2Q9Y4F9 1068 aa8.78□□□□□ -1
CASC3-205ENST00000577605 UTRNP46939 3433 aa8.78□□□□□ -1
CASC3-205ENST00000577605 GOLGB1Q14789 3259 aaKnown RBP8.77□□□□□ -1.01
CASC3-205ENST00000577605 SASH1O94885 1247 aa8.77□□□□□ -1.01
CASC3-205ENST00000577605 PDE8BO95263 885 aa8.77□□□□□ -1.01
CASC3-205ENST00000577605 TRIM27P14373 513 aa8.77□□□□□ -1.01
CASC3-205ENST00000577605 ZNF280AP59817 542 aaPredicted RBP8.77□□□□□ -1.01
CASC3-205ENST00000577605 AMHR2Q16671 573 aa8.77□□□□□ -1.01
CASC3-205ENST00000577605 TTLL5Q6EMB2 1281 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms