RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FPGT-TNNI3KV9GXZ4 949 aa28.94■■■□□ 2.22
SNF8-217ENST00000576353 SALL1Q9NSC2 1324 aa28.94■■■□□ 2.22
SNF8-217ENST00000576353 ECE1P42892 770 aa28.93■■■□□ 2.22
SNF8-217ENST00000576353 ZGPATQ8N5A5 531 aaKnown RBP28.93■■■□□ 2.22
SNF8-217ENST00000576353 PDS5AQ29RF7 1337 aaKnown RBP28.93■■■□□ 2.22
SNF8-217ENST00000576353 POLR2AP24928 1970 aaKnown RBP28.92■■■□□ 2.22
SNF8-217ENST00000576353 RASGRF1Q13972 1273 aa28.92■■■□□ 2.22
SNF8-217ENST00000576353 PAXIP1Q6ZW49 1069 aaPredicted RBP28.92■■■□□ 2.22
SNF8-217ENST00000576353 COL1A1P02452 1464 aaPredicted RBP28.91■■■□□ 2.22
SNF8-217ENST00000576353 CLRN2A0PK11 232 aa28.91■■■□□ 2.22
SNF8-217ENST00000576353 NF2P35240 595 aa28.91■■■□□ 2.22
SNF8-217ENST00000576353 RRP1P56182 461 aaKnown RBP28.91■■■□□ 2.22
SNF8-217ENST00000576353 HHIPL2Q6UWX4 724 aa28.91■■■□□ 2.22
SNF8-217ENST00000576353 DEFB129Q9H1M3 183 aa28.91■■■□□ 2.22
SNF8-217ENST00000576353 EXOC6BQ9Y2D4 811 aa28.91■■■□□ 2.22
SNF8-217ENST00000576353 LDHBP07195 334 aaKnown RBP28.9■■■□□ 2.22
SNF8-217ENST00000576353 UQCRFS1P1P0C7P4 283 aa28.9■■■□□ 2.22
SNF8-217ENST00000576353 HUNKP57058 714 aa28.9■■■□□ 2.22
SNF8-217ENST00000576353 FKBP1BP68106 108 aa28.9■■■□□ 2.22
SNF8-217ENST00000576353 ZDHHC15Q96MV8 337 aa28.9■■■□□ 2.22
SNF8-217ENST00000576353 VEZTQ9HBM0 779 aa28.9■■■□□ 2.22
SNF8-217ENST00000576353 PPP2R3BQ9Y5P8 575 aa28.9■■■□□ 2.22
SNF8-217ENST00000576353 SPDYE2Q495Y8 402 aa28.89■■■□□ 2.22
SNF8-217ENST00000576353 CCDC158Q5M9N0 1113 aa28.89■■■□□ 2.22
SNF8-217ENST00000576353 PRAMEF18Q5VWM3 479 aa28.89■■■□□ 2.22
SNF8-217ENST00000576353 SIRT2Q8IXJ6 389 aa28.89■■■□□ 2.22
SNF8-217ENST00000576353 CAPNS2Q96L46 248 aa28.89■■■□□ 2.22
SNF8-217ENST00000576353 TDRD3Q9H7E2 651 aaKnown RBP28.89■■■□□ 2.22
SNF8-217ENST00000576353 ZNF70Q9UC06 446 aaPredicted RBP28.89■■■□□ 2.22
SNF8-217ENST00000576353 WDR33Q9C0J8 1336 aaKnown RBP28.89■■■□□ 2.21
SNF8-217ENST00000576353 ARAP2Q8WZ64 1704 aa28.89■■■□□ 2.21
SNF8-217ENST00000576353 ARID4AP29374 1257 aaPredicted RBP28.88■■■□□ 2.21
SNF8-217ENST00000576353 PRDX5P30044 214 aa28.88■■■□□ 2.21
SNF8-217ENST00000576353 TNFAIP1Q13829 316 aa28.88■■■□□ 2.21
SNF8-217ENST00000576353 SPTY2D1Q68D10 685 aaPredicted RBP28.87■■■□□ 2.21
SNF8-217ENST00000576353 CYP4F22Q6NT55 531 aa28.87■■■□□ 2.21
SNF8-217ENST00000576353 SPATA5Q8NB90 893 aa28.87■■■□□ 2.21
SNF8-217ENST00000576353 DBNDD2Q9BQY9 259 aa28.87■■■□□ 2.21
SNF8-217ENST00000576353 AOX1Q06278 1338 aa28.87■■■□□ 2.21
SNF8-217ENST00000576353 HMG20BQ9P0W2 317 aa28.86■■■□□ 2.21
SNF8-217ENST00000576353 ABCF2Q9UG63 623 aa28.86■■■□□ 2.21
SNF8-217ENST00000576353 GRM1Q13255 1194 aa28.85■■■□□ 2.21
SNF8-217ENST00000576353 TTC39AQ5SRH9 613 aa28.85■■■□□ 2.21
SNF8-217ENST00000576353 RAB11FIP3O75154 756 aa28.84■■■□□ 2.21
SNF8-217ENST00000576353 APOBEC3HQ6NTF7 200 aaKnown RBP28.84■■■□□ 2.21
SNF8-217ENST00000576353 RHPN1Q8TCX5 695 aa28.84■■■□□ 2.21
SNF8-217ENST00000576353 EAF2Q96CJ1 260 aaPredicted RBP28.84■■■□□ 2.21
SNF8-217ENST00000576353 KIF1BPQ96EK5 621 aa28.84■■■□□ 2.21
SNF8-217ENST00000576353 TMOD2Q9NZR1 351 aa28.84■■■□□ 2.21
SNF8-217ENST00000576353 TNNI2P48788 182 aa28.83■■■□□ 2.21
SNF8-217ENST00000576353 TTLL12Q14166 644 aaPredicted RBP28.83■■■□□ 2.21
SNF8-217ENST00000576353 RASA3Q14644 834 aa28.83■■■□□ 2.21
SNF8-217ENST00000576353 SUPT20HL1Q3ZLR7 823 aa28.83■■■□□ 2.21
SNF8-217ENST00000576353 RGMBQ6NW40 437 aa28.83■■■□□ 2.21
SNF8-217ENST00000576353 SLF2Q8IX21 1173 aa28.83■■■□□ 2.21
SNF8-217ENST00000576353 ZNF512BQ96KM6 892 aaPredicted RBP28.83■■■□□ 2.21
SNF8-217ENST00000576353 CCDC8Q9H0W5 538 aaPredicted RBP28.83■■■□□ 2.21
SNF8-217ENST00000576353 DIXDC1Q155Q3 683 aa28.82■■■□□ 2.2
SNF8-217ENST00000576353 DZIP1Q86YF9 867 aaKnown RBP28.82■■■□□ 2.2
SNF8-217ENST00000576353 DBNLQ9UJU6 430 aaKnown RBP28.82■■■□□ 2.2
SNF8-217ENST00000576353 MCAMP43121 646 aa28.81■■■□□ 2.2
SNF8-217ENST00000576353 ERICH6Q7L0X2 663 aa28.81■■■□□ 2.2
SNF8-217ENST00000576353 ARMC9Q7Z3E5 817 aa28.81■■■□□ 2.2
SNF8-217ENST00000576353 AACSQ86V21 672 aa28.81■■■□□ 2.2
SNF8-217ENST00000576353 CLASRPQ8N2M8 674 aaKnown RBP28.81■■■□□ 2.2
SNF8-217ENST00000576353 CCDC102AQ96A19 550 aa28.81■■■□□ 2.2
SNF8-217ENST00000576353 DAGLAQ9Y4D2 1042 aa28.81■■■□□ 2.2
SNF8-217ENST00000576353 MYH13Q9UKX3 1938 aa28.81■■■□□ 2.2
SNF8-217ENST00000576353 TCP10L2B9ZVM9 353 aa28.8■■■□□ 2.2
SNF8-217ENST00000576353 MAP2K2P36507 400 aa28.8■■■□□ 2.2
SNF8-217ENST00000576353 ZNF157P51786 506 aaPredicted RBP28.8■■■□□ 2.2
SNF8-217ENST00000576353 FKBP1CQ5VVH2 108 aa28.8■■■□□ 2.2
SNF8-217ENST00000576353 PI16Q6UXB8 463 aa28.8■■■□□ 2.2
SNF8-217ENST00000576353 IL1RAPL2Q9NP60 686 aa28.8■■■□□ 2.2
SNF8-217ENST00000576353 APBB1O00213 710 aa28.79■■■□□ 2.2
SNF8-217ENST00000576353 MAP2K1Q02750 393 aaPredicted RBP28.79■■■□□ 2.2
SNF8-217ENST00000576353 TLR7Q9NYK1 1049 aaKnown RBP28.79■■■□□ 2.2
SNF8-217ENST00000576353 UBE2Q2LH0YL09 131 aa28.78■■■□□ 2.2
SNF8-217ENST00000576353 PPP1R12BO60237 982 aaPredicted RBP28.78■■■□□ 2.2
SNF8-217ENST00000576353 NOGQ13253 232 aa28.78■■■□□ 2.2
SNF8-217ENST00000576353 HSPA1AP0DMV8 641 aaKnown RBP28.77■■■□□ 2.2
SNF8-217ENST00000576353 HSPA1BP0DMV9 641 aaKnown RBP28.77■■■□□ 2.2
SNF8-217ENST00000576353 NBPF12Q5TAG4 269 aaPredicted RBP28.77■■■□□ 2.2
SNF8-217ENST00000576353 TBC1D9Q6ZT07 1266 aa28.77■■■□□ 2.2
SNF8-217ENST00000576353 MOB2Q70IA6 237 aa28.77■■■□□ 2.2
SNF8-217ENST00000576353 FAM163AQ96GL9 167 aaPredicted RBP28.77■■■□□ 2.2
SNF8-217ENST00000576353 ECM29Q5VYK3 1845 aa28.77■■■□□ 2.2
SNF8-217ENST00000576353 PAPPA2Q9BXP8 1791 aa28.77■■■□□ 2.2
SNF8-217ENST00000576353 AOC2O75106 756 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 CACNB3P54284 484 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 GSTO1P78417 241 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 MECOMQ03112 1051 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 PRKG1Q13976 671 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 FAM83AQ86UY5 434 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 SNRKQ9NRH2 765 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 LRP2BPQ9P2M1 347 aa28.76■■■□□ 2.19
SNF8-217ENST00000576353 GAKO14976 1311 aa28.75■■■□□ 2.19
SNF8-217ENST00000576353 CDC42EP5Q6NZY7 148 aa28.75■■■□□ 2.19
SNF8-217ENST00000576353 USP40Q9NVE5 1235 aa28.75■■■□□ 2.19
SNF8-217ENST00000576353 RAI14Q9P0K7 980 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms