RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
TVP23B-208ENST00000575261 OTUD7BQ6GQQ9 843 aa13.14□□□□□ -0.31
TVP23B-208ENST00000575261 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
TVP23B-208ENST00000575261 TDRD3Q9H7E2 651 aaKnown RBP13.14□□□□□ -0.31
TVP23B-208ENST00000575261 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-208ENST00000575261 USP2O75604 605 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-208ENST00000575261 GJA5P36382 358 aa13.13□□□□□ -0.31
TVP23B-208ENST00000575261 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
TVP23B-208ENST00000575261 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
TVP23B-208ENST00000575261 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 E9PSI1 815 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 PDE8BO95263 885 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
TVP23B-208ENST00000575261 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
TVP23B-208ENST00000575261 CRHR2Q13324 411 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 LRRC24Q50LG9 513 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 PRPF38BQ5VTL8 546 aaKnown RBP13.12□□□□□ -0.31
TVP23B-208ENST00000575261 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 ERO1AQ96HE7 468 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 TEPSINQ96N21 525 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 ELP3Q9H9T3 547 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
TVP23B-208ENST00000575261 TRIM17Q9Y577 477 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
TVP23B-208ENST00000575261 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
TVP23B-208ENST00000575261 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
TVP23B-208ENST00000575261 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
TVP23B-208ENST00000575261 TEKT1Q969V4 418 aa13.11□□□□□ -0.31
TVP23B-208ENST00000575261 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
TVP23B-208ENST00000575261 MAST3O60307 1309 aa13.11□□□□□ -0.31
TVP23B-208ENST00000575261 VGLL4Q14135 290 aa13.1□□□□□ -0.31
TVP23B-208ENST00000575261 PUM3Q15397 648 aaKnown RBP13.1□□□□□ -0.31
TVP23B-208ENST00000575261 GRIK5Q16478 980 aa13.1□□□□□ -0.31
TVP23B-208ENST00000575261 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.1□□□□□ -0.31
TVP23B-208ENST00000575261 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.1□□□□□ -0.31
TVP23B-208ENST00000575261 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
TVP23B-208ENST00000575261 TMOD2Q9NZR1 351 aa13.1□□□□□ -0.31
TVP23B-208ENST00000575261 SUGT1Q9Y2Z0 365 aa13.1□□□□□ -0.31
TVP23B-208ENST00000575261 CSADQ9Y600 493 aa13.1□□□□□ -0.31
TVP23B-208ENST00000575261 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
TVP23B-208ENST00000575261 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
TVP23B-208ENST00000575261 IFIT1P09914 478 aaKnown RBP13.09□□□□□ -0.31
TVP23B-208ENST00000575261 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
TVP23B-208ENST00000575261 KLHDC4Q8TBB5 520 aa13.09□□□□□ -0.31
TVP23B-208ENST00000575261 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
TVP23B-208ENST00000575261 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
TVP23B-208ENST00000575261 ZDHHC15Q96MV8 337 aa13.09□□□□□ -0.31
TVP23B-208ENST00000575261 PTPN18Q99952 460 aa13.09□□□□□ -0.31
TVP23B-208ENST00000575261 BCAMP50895 628 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 GTF2A2P52657 109 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 SP3Q02447 781 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 FAM83AQ86UY5 434 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 HOOK2Q96ED9 719 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
TVP23B-208ENST00000575261 CCL15-CCL14A0A0B4J2E2 113 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 SPDYE5A6NIY4 337 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 SLC5A1P13866 664 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 FGFR2P21802 821 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 CACNB3P54284 484 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 CCL15Q16663 113 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 ALDH1L2Q3SY69 923 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 FKBP1CQ5VVH2 108 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 BRI3BPQ8WY22 251 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
TVP23B-208ENST00000575261 EYA2O00167 538 aa13.06□□□□□ -0.32
TVP23B-208ENST00000575261 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
TVP23B-208ENST00000575261 TAF1CQ15572 869 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-208ENST00000575261 APOBEC3HQ6NTF7 200 aaKnown RBP13.06□□□□□ -0.32
TVP23B-208ENST00000575261 WDR66Q8TBY9 1149 aa13.06□□□□□ -0.32
TVP23B-208ENST00000575261 LPIN2Q92539 896 aa13.06□□□□□ -0.32
TVP23B-208ENST00000575261 WRNIP1Q96S55 665 aa13.06□□□□□ -0.32
TVP23B-208ENST00000575261 ZFYVE28Q9HCC9 887 aa13.06□□□□□ -0.32
TVP23B-208ENST00000575261 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
TVP23B-208ENST00000575261 WDHD1O75717 1129 aaPredicted RBP13.05□□□□□ -0.32
TVP23B-208ENST00000575261 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
TVP23B-208ENST00000575261 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
TVP23B-208ENST00000575261 DCAF15Q66K64 600 aa13.05□□□□□ -0.32
TVP23B-208ENST00000575261 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
TVP23B-208ENST00000575261 ERO1BQ86YB8 467 aa13.05□□□□□ -0.32
TVP23B-208ENST00000575261 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
TVP23B-208ENST00000575261 SNCAIPQ9Y6H5 919 aa13.05□□□□□ -0.32
TVP23B-208ENST00000575261 UBTFL1P0CB47 393 aaPredicted RBP13.04□□□□□ -0.32
TVP23B-208ENST00000575261 CETPP11597 493 aa13.04□□□□□ -0.32
TVP23B-208ENST00000575261 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
TVP23B-208ENST00000575261 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
TVP23B-208ENST00000575261 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
TVP23B-208ENST00000575261 KIAA0100Q14667 2235 aaKnown RBP13.04□□□□□ -0.32
TVP23B-208ENST00000575261 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
TVP23B-208ENST00000575261 CIAO1O76071 339 aa13.03□□□□□ -0.32
TVP23B-208ENST00000575261 PPIL2Q13356 520 aa13.03□□□□□ -0.32
TVP23B-208ENST00000575261 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms