RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 TNFAIP1Q13829 316 aa26.32■■□□□ 1.8
SPNS3-203ENST00000575185 VGLL4Q14135 290 aa26.32■■□□□ 1.8
SPNS3-203ENST00000575185 TDRD7Q8NHU6 1098 aaKnown RBP26.32■■□□□ 1.8
SPNS3-203ENST00000575185 ZNF333Q96JL9 665 aa26.32■■□□□ 1.8
SPNS3-203ENST00000575185 TMEM39BQ9GZU3 492 aa26.32■■□□□ 1.8
SPNS3-203ENST00000575185 SERPINA10Q9UK55 444 aa26.31■■□□□ 1.8
SPNS3-203ENST00000575185 PTCH2Q9Y6C5 1203 aa26.31■■□□□ 1.8
SPNS3-203ENST00000575185 CCL15-CCL14A0A0B4J2E2 113 aa26.3■■□□□ 1.8
SPNS3-203ENST00000575185 EXOSC9Q06265 439 aaKnown RBP26.3■■□□□ 1.8
SPNS3-203ENST00000575185 TAF1CQ15572 869 aaPredicted RBP26.3■■□□□ 1.8
SPNS3-203ENST00000575185 GRIK5Q16478 980 aa26.3■■□□□ 1.8
SPNS3-203ENST00000575185 CCL15Q16663 113 aa26.3■■□□□ 1.8
SPNS3-203ENST00000575185 DZIP1LQ8IYY4 767 aaKnown RBP26.3■■□□□ 1.8
SPNS3-203ENST00000575185 GRM8O00222 908 aa26.29■■□□□ 1.8
SPNS3-203ENST00000575185 FAM43AQ8N2R8 423 aa26.29■■□□□ 1.8
SPNS3-203ENST00000575185 OTUD5Q96G74 571 aa26.29■■□□□ 1.8
SPNS3-203ENST00000575185 FAM84BQ96KN1 310 aaPredicted RBP26.29■■□□□ 1.8
SPNS3-203ENST00000575185 PUS3Q9BZE2 481 aaKnown RBP26.29■■□□□ 1.8
SPNS3-203ENST00000575185 HIBADHP31937 336 aaKnown RBP26.28■■□□□ 1.8
SPNS3-203ENST00000575185 CRKP46108 304 aa26.28■■□□□ 1.8
SPNS3-203ENST00000575185 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.28■■□□□ 1.8
SPNS3-203ENST00000575185 SALL2Q9Y467 1007 aaPredicted RBP26.28■■□□□ 1.8
SPNS3-203ENST00000575185 MYCP01106 439 aaPredicted RBP26.27■■□□□ 1.8
SPNS3-203ENST00000575185 SLC9C1Q4G0N8 1177 aa26.27■■□□□ 1.8
SPNS3-203ENST00000575185 TMEM106CQ9BVX2 250 aa26.27■■□□□ 1.8
SPNS3-203ENST00000575185 IQSEC3Q9UPP2 1182 aaPredicted RBP26.27■■□□□ 1.8
SPNS3-203ENST00000575185 SZT2Q5T011 3432 aa26.26■■□□□ 1.79
SPNS3-203ENST00000575185 CEP290O15078 2479 aa26.26■■□□□ 1.79
SPNS3-203ENST00000575185 FXR1P51114 621 aaKnown RBP eCLIP26.26■■□□□ 1.79
SPNS3-203ENST00000575185 CACNB3P54284 484 aa26.26■■□□□ 1.79
SPNS3-203ENST00000575185 UBE4AQ14139 1066 aa26.26■■□□□ 1.79
SPNS3-203ENST00000575185 ZFYVE28Q9HCC9 887 aa26.26■■□□□ 1.79
SPNS3-203ENST00000575185 GTF2A2P52657 109 aa26.25■■□□□ 1.79
SPNS3-203ENST00000575185 MAP3K9P80192 1104 aa26.25■■□□□ 1.79
SPNS3-203ENST00000575185 ARHGAP39Q9C0H5 1083 aa26.25■■□□□ 1.79
SPNS3-203ENST00000575185 SUCLG2Q96I99 432 aa26.24■■□□□ 1.79
SPNS3-203ENST00000575185 CSADQ9Y600 493 aa26.24■■□□□ 1.79
SPNS3-203ENST00000575185 TNNI2P48788 182 aa26.23■■□□□ 1.79
SPNS3-203ENST00000575185 CHAF1AQ13111 956 aaPredicted RBP26.23■■□□□ 1.79
SPNS3-203ENST00000575185 SH3TC2Q8TF17 1288 aa26.23■■□□□ 1.79
SPNS3-203ENST00000575185 KAZALD1Q96I82 304 aa26.23■■□□□ 1.79
SPNS3-203ENST00000575185 C9orf78Q9NZ63 289 aaPredicted RBP26.23■■□□□ 1.79
SPNS3-203ENST00000575185 SNCAIPQ9Y6H5 919 aa26.23■■□□□ 1.79
SPNS3-203ENST00000575185 SPDYE5A6NIY4 337 aa26.22■■□□□ 1.79
SPNS3-203ENST00000575185 SLC4A8Q2Y0W8 1093 aa26.22■■□□□ 1.79
SPNS3-203ENST00000575185 SPINK5Q9NQ38 1064 aaPredicted RBP26.22■■□□□ 1.79
SPNS3-203ENST00000575185 COLQQ9Y215 455 aaPredicted RBP26.22■■□□□ 1.79
SPNS3-203ENST00000575185 SLC4A10Q6U841 1118 aa26.21■■□□□ 1.79
SPNS3-203ENST00000575185 NBPF11Q86T75 865 aa26.21■■□□□ 1.79
SPNS3-203ENST00000575185 MYH13Q9UKX3 1938 aa26.21■■□□□ 1.79
SPNS3-203ENST00000575185 ECM2O94769 699 aaPredicted RBP26.2■■□□□ 1.78
SPNS3-203ENST00000575185 ZKSCAN4Q969J2 545 aaPredicted RBP26.2■■□□□ 1.78
SPNS3-203ENST00000575185 RIPOR2Q9Y4F9 1068 aa26.2■■□□□ 1.78
SPNS3-203ENST00000575185 BTBD19C9JJ37 291 aa26.19■■□□□ 1.78
SPNS3-203ENST00000575185 ARHGEF6Q15052 776 aa26.19■■□□□ 1.78
SPNS3-203ENST00000575185 NCBP3Q53F19 620 aaKnown RBP26.19■■□□□ 1.78
SPNS3-203ENST00000575185 WRNIP1Q96S55 665 aa26.19■■□□□ 1.78
SPNS3-203ENST00000575185 TRIOBPQ9H2D6 2365 aa26.18■■□□□ 1.78
SPNS3-203ENST00000575185 TLR2O60603 784 aa26.18■■□□□ 1.78
SPNS3-203ENST00000575185 ALDH1L1O75891 902 aa26.18■■□□□ 1.78
SPNS3-203ENST00000575185 LACTBP83111 547 aaPredicted RBP26.18■■□□□ 1.78
SPNS3-203ENST00000575185 FBXO33Q7Z6M2 555 aa26.18■■□□□ 1.78
SPNS3-203ENST00000575185 WDR63Q8IWG1 891 aa26.18■■□□□ 1.78
SPNS3-203ENST00000575185 RANBP2P49792 3224 aaKnown RBP26.18■■□□□ 1.78
SPNS3-203ENST00000575185 IRF6O14896 467 aa26.17■■□□□ 1.78
SPNS3-203ENST00000575185 NBPF7P0C2Y1 421 aaPredicted RBP26.17■■□□□ 1.78
SPNS3-203ENST00000575185 LRRC24Q50LG9 513 aa26.17■■□□□ 1.78
SPNS3-203ENST00000575185 VPS37DQ86XT2 251 aa26.17■■□□□ 1.78
SPNS3-203ENST00000575185 TEKT1Q969V4 418 aa26.17■■□□□ 1.78
SPNS3-203ENST00000575185 SRCIN1Q9C0H9 1055 aa26.17■■□□□ 1.78
SPNS3-203ENST00000575185 MROH5Q6ZUA9 1318 aa26.16■■□□□ 1.78
SPNS3-203ENST00000575185 CETPP11597 493 aa26.16■■□□□ 1.78
SPNS3-203ENST00000575185 ERO1BQ86YB8 467 aa26.16■■□□□ 1.78
SPNS3-203ENST00000575185 BICC1Q9H694 974 aaKnown RBP26.16■■□□□ 1.78
SPNS3-203ENST00000575185 H0YGN5 161 aa26.15■■□□□ 1.78
SPNS3-203ENST00000575185 FRAT2O75474 233 aaPredicted RBP26.15■■□□□ 1.78
SPNS3-203ENST00000575185 CTGFP29279 349 aa26.14■■□□□ 1.78
SPNS3-203ENST00000575185 HDLBPQ00341 1268 aaKnown RBP26.14■■□□□ 1.78
SPNS3-203ENST00000575185 SNAPC2Q13487 334 aa26.14■■□□□ 1.78
SPNS3-203ENST00000575185 METTL24Q5JXM2 366 aa26.14■■□□□ 1.78
SPNS3-203ENST00000575185 DIEXFQ68CQ4 756 aaKnown RBP26.14■■□□□ 1.78
SPNS3-203ENST00000575185 ZDHHC15Q96MV8 337 aa26.14■■□□□ 1.78
SPNS3-203ENST00000575185 PPIL2Q13356 520 aa26.13■■□□□ 1.77
SPNS3-203ENST00000575185 KIF22Q14807 665 aa26.13■■□□□ 1.77
SPNS3-203ENST00000575185 APOBEC3HQ6NTF7 200 aaKnown RBP26.13■■□□□ 1.77
SPNS3-203ENST00000575185 VGLL2Q8N8G2 317 aa26.13■■□□□ 1.77
SPNS3-203ENST00000575185 TBC1D22AQ8WUA7 517 aa26.13■■□□□ 1.77
SPNS3-203ENST00000575185 MRS2Q9HD23 443 aa26.13■■□□□ 1.77
SPNS3-203ENST00000575185 AK9Q5TCS8 1911 aa26.13■■□□□ 1.77
SPNS3-203ENST00000575185 WDHD1O75717 1129 aaPredicted RBP26.12■■□□□ 1.77
SPNS3-203ENST00000575185 BCAMP50895 628 aa26.12■■□□□ 1.77
SPNS3-203ENST00000575185 CAVIN4Q5BKX8 364 aa26.12■■□□□ 1.77
SPNS3-203ENST00000575185 FAM83AQ86UY5 434 aa26.12■■□□□ 1.77
SPNS3-203ENST00000575185 ANKRD44Q8N8A2 993 aa26.12■■□□□ 1.77
SPNS3-203ENST00000575185 KLHDC4Q8TBB5 520 aa26.12■■□□□ 1.77
SPNS3-203ENST00000575185 SHISA4Q96DD7 197 aa26.12■■□□□ 1.77
SPNS3-203ENST00000575185 ZCCHC17Q9NP64 241 aaKnown RBP26.12■■□□□ 1.77
SPNS3-203ENST00000575185 TMOD2Q9NZR1 351 aa26.12■■□□□ 1.77
SPNS3-203ENST00000575185 RPAP1Q9BWH6 1393 aaPredicted RBP26.11■■□□□ 1.77
SPNS3-203ENST00000575185 INPP5BP32019 993 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms